RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 TRIM35Q9UPQ4 493 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 RNF113AO15541 343 aaKnown RBP12.33□□□□□ -0.44
COL11A1-203ENST00000370096 CLTAP09496 248 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 SAT1P21673 171 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 GNA11P29992 359 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 VPS41P49754 854 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 TFCP2Q12800 502 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 VWA3BQ502W6 1294 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 TYW1BQ6NUM6 668 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 DCUN1D2Q6PH85 259 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 COPS6Q7L5N1 327 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 RPAINQ86UA6 219 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 TXKP42681 527 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 SLC8A3P57103 927 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 LONRF2Q1L5Z9 754 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 CTAGE3PQ8IX95 158 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 SNRPA1P09661 255 aaKnown RBP12.33□□□□□ -0.44
COL11A1-203ENST00000370096 CASP2P42575 452 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 ZNF75DP51815 510 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 PAK2Q13177 524 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 HDAC1Q13547 482 aaPredicted RBP12.33□□□□□ -0.44
COL11A1-203ENST00000370096 CNNM4Q6P4Q7 775 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 TNNQ9UQP3 1299 aa12.33□□□□□ -0.44
COL11A1-203ENST00000370096 KRT19P08727 400 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 RASSF2P50749 326 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 NCAPH2Q6IBW4 605 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 ADAT2Q7Z6V5 191 aaKnown RBP12.32□□□□□ -0.44
COL11A1-203ENST00000370096 DCLK2Q8N568 766 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 MYRIPQ8NFW9 859 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 STAG1Q8WVM7 1258 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 ABTB1Q969K4 478 aaPredicted RBP12.32□□□□□ -0.44
COL11A1-203ENST00000370096 SRGAP1Q7Z6B7 1085 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 SCYL1Q96KG9 808 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 SETDB2Q96T68 719 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 PAK1Q13153 545 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 KIF22Q14807 665 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 DBN1Q16643 649 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 ARHGAP44Q17R89 818 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 ZNF804AQ7Z570 1209 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 PALM2Q8IXS6 379 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 VCX3AQ9NNX9 186 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 DDX41Q9UJV9 622 aaKnown RBP12.32□□□□□ -0.44
COL11A1-203ENST00000370096 RGS16O15492 202 aaPredicted RBP12.32□□□□□ -0.44
COL11A1-203ENST00000370096 SEC24BO95487 1268 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 NACA2Q9H009 215 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 FGD5Q6ZNL6 1462 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 GRM8O00222 908 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 SLC12A2P55011 1212 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 BIRC2Q13490 618 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 TRIM14Q14142 442 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 SLC9C1Q4G0N8 1177 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 NELFCDQ8IXH7 590 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 KRT12Q99456 494 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 ADKP55263 362 aaKnown RBP12.32□□□□□ -0.44
COL11A1-203ENST00000370096 PPP2R5AQ15172 486 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 IFNL2Q8IZJ0 200 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 OGFOD1Q8N543 542 aa12.32□□□□□ -0.44
COL11A1-203ENST00000370096 CTNNA1P35221 906 aaKnown RBP12.31□□□□□ -0.44
COL11A1-203ENST00000370096 ATP6V1AP38606 617 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 STRN3Q13033 797 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 PEX26Q7Z412 305 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 PPP4R1Q8TF05 950 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 BLZF1Q9H2G9 400 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 BZW2Q9Y6E2 419 aaKnown RBP12.31□□□□□ -0.44
COL11A1-203ENST00000370096 CHRNA2Q15822 529 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 FAM173BQ6P4H8 233 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 NGLY1Q96IV0 654 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 CASKIN1Q8WXD9 1431 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 TROVE2P10155 538 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL11A1-203ENST00000370096 ATICP31939 592 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 CFAP221Q4G0U5 840 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 FNBP4Q8N3X1 1017 aaPredicted RBP12.31□□□□□ -0.44
COL11A1-203ENST00000370096 KCNH3Q9ULD8 1083 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 B4E1Z4 1266 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 LGSNQ5TDP6 509 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 RASIP1Q5U651 963 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 DHX32Q7L7V1 743 aaKnown RBP12.31□□□□□ -0.44
COL11A1-203ENST00000370096 NCOA5Q9HCD5 579 aaKnown RBP12.31□□□□□ -0.44
COL11A1-203ENST00000370096 SEPT10Q9P0V9 454 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 RAPGEF3O95398 923 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 TRAF1Q13077 416 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 RPS6KA1Q15418 735 aa12.31□□□□□ -0.44
COL11A1-203ENST00000370096 TRMT44Q8IYL2 757 aaKnown RBP12.31□□□□□ -0.44
COL11A1-203ENST00000370096 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.3□□□□□ -0.44
COL11A1-203ENST00000370096 RBM28Q9NW13 759 aaKnown RBP12.3□□□□□ -0.44
COL11A1-203ENST00000370096 SLC52A1Q9NWF4 448 aa12.3□□□□□ -0.44
COL11A1-203ENST00000370096 RNF40O75150 1001 aa12.3□□□□□ -0.44
COL11A1-203ENST00000370096 MYCLP12524 364 aaPredicted RBP12.3□□□□□ -0.44
COL11A1-203ENST00000370096 SMTNP53814 917 aa12.3□□□□□ -0.44
COL11A1-203ENST00000370096 STAMQ92783 540 aa12.3□□□□□ -0.44
COL11A1-203ENST00000370096 ANLNQ9NQW6 1124 aa12.3□□□□□ -0.44
COL11A1-203ENST00000370096 GCNT3O95395 438 aa12.3□□□□□ -0.44
COL11A1-203ENST00000370096 PHEXP78562 749 aa12.3□□□□□ -0.44
COL11A1-203ENST00000370096 NOP9Q86U38 636 aaKnown RBP12.3□□□□□ -0.44
COL11A1-203ENST00000370096 RDH13Q8NBN7 331 aa12.3□□□□□ -0.44
COL11A1-203ENST00000370096 NELFBQ8WX92 580 aa12.3□□□□□ -0.44
COL11A1-203ENST00000370096 RSAD2Q8WXG1 361 aa12.3□□□□□ -0.44
COL11A1-203ENST00000370096 ATP8B2P98198 1209 aa12.3□□□□□ -0.44
COL11A1-203ENST00000370096 CFAP61Q8NHU2 1237 aa12.3□□□□□ -0.44
COL11A1-203ENST00000370096 NIP7Q9Y221 180 aaKnown RBP eCLIP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms