RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 TUBE1Q9UJT0 475 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 HPSEQ9Y251 543 aa12.48□□□□□ -0.41
LRIF1-201ENST00000369763 VWA3AA6NCI4 1184 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 PES1O00541 588 aaKnown RBP12.47□□□□□ -0.41
LRIF1-201ENST00000369763 CBFA2T2O43439 604 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 CASQ1P31415 396 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 WTAPQ15007 396 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 CCDC12Q8WUD4 166 aaPredicted RBP12.47□□□□□ -0.41
LRIF1-201ENST00000369763 BPIFA3Q9BQP9 254 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 CSRNP2Q9H175 543 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 ATG3Q9NT62 314 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 WDR17Q8IZU2 1322 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 CPDO75976 1380 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 ERICH2A1L162 156 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 IKBKBO14920 756 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 PNMA6AP0CW24 399 aaPredicted RBP12.47□□□□□ -0.41
LRIF1-201ENST00000369763 CCT6AP40227 531 aaKnown RBP12.47□□□□□ -0.41
LRIF1-201ENST00000369763 L2HGDHQ9H9P8 463 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 SPATA31A3Q5VYP0 1347 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 CDC25AP30304 524 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 EARS2Q5JPH6 523 aaKnown RBP12.47□□□□□ -0.41
LRIF1-201ENST00000369763 BLZF1Q9H2G9 400 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 RNF216Q9NWF9 866 aaPredicted RBP12.47□□□□□ -0.41
LRIF1-201ENST00000369763 FHOD1Q9Y613 1164 aa12.47□□□□□ -0.41
LRIF1-201ENST00000369763 CUTAO60888 179 aa12.46□□□□□ -0.41
LRIF1-201ENST00000369763 PPP6R2O75170 966 aa12.46□□□□□ -0.41
LRIF1-201ENST00000369763 CSF1RP07333 972 aa12.46□□□□□ -0.41
LRIF1-201ENST00000369763 EVX2Q03828 476 aa12.46□□□□□ -0.41
LRIF1-201ENST00000369763 MAP3K12Q12852 859 aa12.46□□□□□ -0.41
LRIF1-201ENST00000369763 GIGYF2Q6Y7W6 1299 aaKnown RBP12.46□□□□□ -0.41
LRIF1-201ENST00000369763 WNT7AO00755 349 aa12.46□□□□□ -0.41
LRIF1-201ENST00000369763 BMS1Q14692 1282 aaKnown RBP12.46□□□□□ -0.41
LRIF1-201ENST00000369763 ZNF174Q15697 407 aa12.46□□□□□ -0.41
LRIF1-201ENST00000369763 CCDC93Q567U6 631 aa12.46□□□□□ -0.41
LRIF1-201ENST00000369763 NEK11Q8NG66 645 aa12.46□□□□□ -0.41
LRIF1-201ENST00000369763 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.46□□□□□ -0.41
LRIF1-201ENST00000369763 UBAC1Q9BSL1 405 aa12.46□□□□□ -0.41
LRIF1-201ENST00000369763 PARP3Q9Y6F1 533 aa12.46□□□□□ -0.41
LRIF1-201ENST00000369763 AKAP17AQ02040 695 aaKnown RBP12.46□□□□□ -0.42
LRIF1-201ENST00000369763 AKNAD1Q5T1N1 836 aa12.46□□□□□ -0.42
LRIF1-201ENST00000369763 MED15Q96RN5 788 aa12.46□□□□□ -0.42
LRIF1-201ENST00000369763 ARFGEF2Q9Y6D5 1785 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 GSG1L2A8MUP6 293 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 TTF1Q15361 905 aaPredicted RBP12.45□□□□□ -0.42
LRIF1-201ENST00000369763 SMIM5Q71RC9 77 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
LRIF1-201ENST00000369763 GPIHBP1Q8IV16 184 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 MRPL44Q9H9J2 332 aaKnown RBP12.45□□□□□ -0.42
LRIF1-201ENST00000369763 RAI14Q9P0K7 980 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 MAP3K15Q6ZN16 1313 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 PATL2C9JE40 543 aaKnown RBP12.45□□□□□ -0.42
LRIF1-201ENST00000369763 MMP1P03956 469 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 H2AFXP16104 143 aaPredicted RBP12.45□□□□□ -0.42
LRIF1-201ENST00000369763 GABPB1Q06547 395 aaPredicted RBP12.45□□□□□ -0.42
LRIF1-201ENST00000369763 SPECC1LQ69YQ0 1117 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 TMEM87BQ96K49 555 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 SLC4A9Q96Q91 983 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 A0A087X0B3 334 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 ZSCAN12O43309 604 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 PLA2G4AP47712 749 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 UBE3CQ15386 1083 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 TC2NQ8N9U0 490 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 V9GY48 417 aaPredicted RBP12.45□□□□□ -0.42
LRIF1-201ENST00000369763 RIC1Q4ADV7 1423 aa12.45□□□□□ -0.42
LRIF1-201ENST00000369763 SIPA1L3O60292 1781 aaPredicted RBP12.44□□□□□ -0.42
LRIF1-201ENST00000369763 ABL1P00519 1130 aa12.44□□□□□ -0.42
LRIF1-201ENST00000369763 PPP2R3AQ06190 1150 aa12.44□□□□□ -0.42
LRIF1-201ENST00000369763 SART3Q15020 963 aaKnown RBP12.44□□□□□ -0.42
LRIF1-201ENST00000369763 WWC2Q6AWC2 1192 aa12.44□□□□□ -0.42
LRIF1-201ENST00000369763 BRINP3Q76B58 766 aa12.44□□□□□ -0.42
LRIF1-201ENST00000369763 FBXL16Q8N461 479 aa12.44□□□□□ -0.42
LRIF1-201ENST00000369763 ACSBG1Q96GR2 724 aa12.44□□□□□ -0.42
LRIF1-201ENST00000369763 ARGLU1Q9NWB6 273 aaPredicted RBP12.44□□□□□ -0.42
LRIF1-201ENST00000369763 FBXO2Q9UK22 296 aaPredicted RBP12.44□□□□□ -0.42
LRIF1-201ENST00000369763 TCRBV5S4A2TA0A5A2 114 aa12.44□□□□□ -0.42
LRIF1-201ENST00000369763 ARHGAP6O43182 974 aa12.44□□□□□ -0.42
LRIF1-201ENST00000369763 FMNL1O95466 1100 aaPredicted RBP12.44□□□□□ -0.42
LRIF1-201ENST00000369763 CYP7A1P22680 504 aa12.44□□□□□ -0.42
LRIF1-201ENST00000369763 PUM3Q15397 648 aaKnown RBP12.44□□□□□ -0.42
LRIF1-201ENST00000369763 ADGRA1Q86SQ6 560 aa12.44□□□□□ -0.42
LRIF1-201ENST00000369763 TIGD1Q96MW7 591 aa12.44□□□□□ -0.42
LRIF1-201ENST00000369763 PLIN2Q99541 437 aa12.44□□□□□ -0.42
LRIF1-201ENST00000369763 TEX13AQ9BXU3 409 aaPredicted RBP12.44□□□□□ -0.42
LRIF1-201ENST00000369763 SCN11AQ9UI33 1791 aa12.44□□□□□ -0.42
LRIF1-201ENST00000369763 SASH3O75995 380 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 TMEM139Q8IV31 216 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 ZNF654Q8IZM8 581 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 HINFPQ9BQA5 517 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 NMT2O60551 498 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 TADA3O75528 432 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 PLEKHA8P1O95397 391 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 CD44P16070 742 aaKnown RBP12.43□□□□□ -0.42
LRIF1-201ENST00000369763 GYG1P46976 350 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 ST5P78524 1137 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 RBL2Q08999 1139 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 MCM6Q14566 821 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 SKIDA1Q1XH10 827 aa12.43□□□□□ -0.42
LRIF1-201ENST00000369763 VGLL2Q8N8G2 317 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms