RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 TRIM29Q14134 588 aa14.02□□□□□ -0.16
PHGDH-201ENST00000369407 IGSF22Q8N9C0 903 aa14.02□□□□□ -0.16
PHGDH-201ENST00000369407 HINFPQ9BQA5 517 aa14.02□□□□□ -0.16
PHGDH-201ENST00000369407 KIF5CO60282 957 aa14.02□□□□□ -0.17
PHGDH-201ENST00000369407 CDC25AP30304 524 aa14.02□□□□□ -0.17
PHGDH-201ENST00000369407 IARSP41252 1262 aaKnown RBP14.02□□□□□ -0.17
PHGDH-201ENST00000369407 E2F4Q16254 413 aa14.02□□□□□ -0.17
PHGDH-201ENST00000369407 KRI1Q8N9T8 703 aaKnown RBP14.02□□□□□ -0.17
PHGDH-201ENST00000369407 CEP126Q9P2H0 1117 aa14.02□□□□□ -0.17
PHGDH-201ENST00000369407 ANGEL1Q9UNK9 670 aaKnown RBP14.02□□□□□ -0.17
PHGDH-201ENST00000369407 BRD3Q15059 726 aa14.02□□□□□ -0.17
PHGDH-201ENST00000369407 APOA5Q6Q788 366 aa14.02□□□□□ -0.17
PHGDH-201ENST00000369407 HDXQ7Z353 690 aa14.02□□□□□ -0.17
PHGDH-201ENST00000369407 CNPY4Q8N129 248 aa14.02□□□□□ -0.17
PHGDH-201ENST00000369407 NOA1Q8NC60 698 aaKnown RBP14.02□□□□□ -0.17
PHGDH-201ENST00000369407 STAMQ92783 540 aa14.02□□□□□ -0.17
PHGDH-201ENST00000369407 NFAT5O94916 1531 aa14.01□□□□□ -0.17
PHGDH-201ENST00000369407 LMO7Q8WWI1 1683 aa14.01□□□□□ -0.17
PHGDH-201ENST00000369407 ZMYM6O95789 1325 aa14.01□□□□□ -0.17
PHGDH-201ENST00000369407 NR5A1Q13285 461 aa14.01□□□□□ -0.17
PHGDH-201ENST00000369407 PPFIBP1Q86W92 1011 aa14.01□□□□□ -0.17
PHGDH-201ENST00000369407 CDC23Q9UJX2 597 aa14.01□□□□□ -0.17
PHGDH-201ENST00000369407 CASP14P31944 242 aa14.01□□□□□ -0.17
PHGDH-201ENST00000369407 TOB1P50616 345 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-201ENST00000369407 NR1I3Q14994 352 aa14.01□□□□□ -0.17
PHGDH-201ENST00000369407 NCAPH2Q6IBW4 605 aa14.01□□□□□ -0.17
PHGDH-201ENST00000369407 ZKSCAN3Q9BRR0 538 aa14.01□□□□□ -0.17
PHGDH-201ENST00000369407 KCNG1Q9UIX4 513 aa14.01□□□□□ -0.17
PHGDH-201ENST00000369407 AKAP2Q9Y2D5 859 aa14.01□□□□□ -0.17
PHGDH-201ENST00000369407 UBN2Q6ZU65 1347 aa14□□□□□ -0.17
PHGDH-201ENST00000369407 GOLGA8AA7E2F4 631 aa14□□□□□ -0.17
PHGDH-201ENST00000369407 NBPF26B4DH59 902 aa14□□□□□ -0.17
PHGDH-201ENST00000369407 CCT6AP40227 531 aaKnown RBP14□□□□□ -0.17
PHGDH-201ENST00000369407 NBPF14Q5TI25 921 aa14□□□□□ -0.17
PHGDH-201ENST00000369407 NBPF10Q6P3W6 841 aaKnown RBP14□□□□□ -0.17
PHGDH-201ENST00000369407 NBPF15Q8N660 670 aa14□□□□□ -0.17
PHGDH-201ENST00000369407 PCDHB6Q9Y5E3 794 aa14□□□□□ -0.17
PHGDH-201ENST00000369407 H7C1W4 665 aa14□□□□□ -0.17
PHGDH-201ENST00000369407 A1BGP04217 495 aa14□□□□□ -0.17
PHGDH-201ENST00000369407 PHKG2P15735 406 aa14□□□□□ -0.17
PHGDH-201ENST00000369407 CASP8Q14790 479 aa14□□□□□ -0.17
PHGDH-201ENST00000369407 PLBD2Q8NHP8 589 aa14□□□□□ -0.17
PHGDH-201ENST00000369407 CWC25Q9NXE8 425 aaPredicted RBP14□□□□□ -0.17
PHGDH-201ENST00000369407 L1RE1Q9UN81 338 aa14□□□□□ -0.17
PHGDH-201ENST00000369407 TFR2Q9UP52 801 aa14□□□□□ -0.17
PHGDH-201ENST00000369407 KDM6AO15550 1401 aaPredicted RBP14□□□□□ -0.17
PHGDH-201ENST00000369407 LRRIQ3A6PVS8 624 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-201ENST00000369407 ZBTB43O43298 467 aa13.99□□□□□ -0.17
PHGDH-201ENST00000369407 CD44P16070 742 aaKnown RBP13.99□□□□□ -0.17
PHGDH-201ENST00000369407 NUTM2AQ8IVF1 878 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-201ENST00000369407 RABEP2Q9H5N1 569 aa13.99□□□□□ -0.17
PHGDH-201ENST00000369407 SH2B2O14492 632 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-201ENST00000369407 ZMYND10O75800 440 aa13.99□□□□□ -0.17
PHGDH-201ENST00000369407 IDH1O75874 414 aaKnown RBP13.99□□□□□ -0.17
PHGDH-201ENST00000369407 FXR1P51114 621 aaKnown RBP eCLIP13.99□□□□□ -0.176e-7■■■■□ 19.4
PHGDH-201ENST00000369407 FBXL16Q8N461 479 aa13.99□□□□□ -0.17
PHGDH-201ENST00000369407 ENOX1Q8TC92 643 aaKnown RBP13.99□□□□□ -0.17
PHGDH-201ENST00000369407 RIN2Q8WYP3 895 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-201ENST00000369407 APPBP2Q92624 585 aa13.99□□□□□ -0.17
PHGDH-201ENST00000369407 TRIM10Q9UDY6 481 aa13.99□□□□□ -0.17
PHGDH-201ENST00000369407 NOP2P46087 812 aaKnown RBP13.99□□□□□ -0.17
PHGDH-201ENST00000369407 RRP12Q5JTH9 1297 aaKnown RBP13.99□□□□□ -0.17
PHGDH-201ENST00000369407 DIS3L2Q8IYB7 885 aaKnown RBP13.99□□□□□ -0.17
PHGDH-201ENST00000369407 FAM217BQ9NTX9 383 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-201ENST00000369407 CTAGE9A4FU28 777 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 RNF225M0QZC1 329 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-201ENST00000369407 ENC1O14682 589 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 AKAP17AQ02040 695 aaKnown RBP13.98□□□□□ -0.17
PHGDH-201ENST00000369407 MORC3Q14149 939 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 TMEM67Q5HYA8 995 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 OXER1Q8TDS5 423 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 FAM205CA6NFA0 338 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 CSB-PGBD3P0DP91 1061 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 CTDSPL2Q05D32 466 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 CPLX2Q6PUV4 134 aaKnown RBP13.98□□□□□ -0.17
PHGDH-201ENST00000369407 PACS2Q86VP3 889 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 NOSTRINQ8IVI9 506 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 CEP112Q8N8E3 955 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 MLKLQ8NB16 471 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 FAM204AQ9H8W3 233 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 PSD3Q9NYI0 1048 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 HOOK1Q9UJC3 728 aaKnown RBP13.98□□□□□ -0.17
PHGDH-201ENST00000369407 FBXO2Q9UK22 296 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-201ENST00000369407 C5P01031 1676 aa13.98□□□□□ -0.17
PHGDH-201ENST00000369407 NTRK3Q16288 839 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 HSP90B2PQ58FF3 399 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 EPSTI1Q96J88 318 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 SLF1Q9BQI6 1058 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 CSRNP2Q9H175 543 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.97□□□□□ -0.17
PHGDH-201ENST00000369407 HDAC6Q9UBN7 1215 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 CPDO75976 1380 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 A0A087X0B3 334 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 A0A1B0GTH6 734 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 FAM237AA0A1B0GTK4 181 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 hCG_1642624A0A1W2PR95 340 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 LRRC31Q6UY01 552 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 SYNE4Q8N205 404 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 NWD2Q9ULI1 1742 aa13.97□□□□□ -0.17
PHGDH-201ENST00000369407 EIF3CLB5ME19 914 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms