RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 C2CD5Q86YS7 1000 aa10.69□□□□□ -0.7
TPM3-213ENST00000368545 RNF19AQ9NV58 838 aa10.69□□□□□ -0.7
TPM3-213ENST00000368545 ZPR1O75312 459 aa10.69□□□□□ -0.7
TPM3-213ENST00000368545 MPSTP25325 297 aa10.69□□□□□ -0.7
TPM3-213ENST00000368545 CHRNA5P30532 468 aa10.69□□□□□ -0.7
TPM3-213ENST00000368545 STYK1Q6J9G0 422 aa10.69□□□□□ -0.7
TPM3-213ENST00000368545 MAMSTRQ6ZN01 415 aa10.69□□□□□ -0.7
TPM3-213ENST00000368545 METTL16Q86W50 562 aaKnown RBP10.69□□□□□ -0.7
TPM3-213ENST00000368545 CCDC191Q8NCU4 936 aa10.69□□□□□ -0.7
TPM3-213ENST00000368545 LRRCC1Q9C099 1032 aa10.69□□□□□ -0.7
TPM3-213ENST00000368545 CWC25Q9NXE8 425 aaPredicted RBP10.69□□□□□ -0.7
TPM3-213ENST00000368545 MAP3K15Q6ZN16 1313 aa10.68□□□□□ -0.7
TPM3-213ENST00000368545 HSP90AB3PQ58FF7 597 aa10.68□□□□□ -0.7
TPM3-213ENST00000368545 C4orf48Q5BLP8 95 aa10.68□□□□□ -0.7
TPM3-213ENST00000368545 BMP2KLQ5H9B9 411 aa10.68□□□□□ -0.7
TPM3-213ENST00000368545 NT5DC4Q86YG4 428 aa10.68□□□□□ -0.7
TPM3-213ENST00000368545 CCDC24Q8N4L8 307 aa10.68□□□□□ -0.7
TPM3-213ENST00000368545 SP7Q8TDD2 431 aaPredicted RBP10.68□□□□□ -0.7
TPM3-213ENST00000368545 SUCLG2Q96I99 432 aa10.68□□□□□ -0.7
TPM3-213ENST00000368545 EXOC6BQ9Y2D4 811 aa10.68□□□□□ -0.7
TPM3-213ENST00000368545 ZBTB1Q9Y2K1 713 aa10.68□□□□□ -0.7
TPM3-213ENST00000368545 BCORQ6W2J9 1755 aa10.68□□□□□ -0.7
TPM3-213ENST00000368545 BCAMP50895 628 aa10.67□□□□□ -0.7
TPM3-213ENST00000368545 DDR1Q08345 913 aa10.67□□□□□ -0.7
TPM3-213ENST00000368545 GIMAP6Q6P9H5 292 aa10.67□□□□□ -0.7
TPM3-213ENST00000368545 USP50Q70EL3 339 aaPredicted RBP10.67□□□□□ -0.7
TPM3-213ENST00000368545 TMEM87AQ8NBN3 555 aa10.67□□□□□ -0.7
TPM3-213ENST00000368545 BICC1Q9H694 974 aaKnown RBP10.67□□□□□ -0.7
TPM3-213ENST00000368545 MYH14Q7Z406 1995 aaKnown RBP10.67□□□□□ -0.7
TPM3-213ENST00000368545 A0A087WZG4 1122 aa10.67□□□□□ -0.7
TPM3-213ENST00000368545 ERVV-1B6SEH8 477 aa10.67□□□□□ -0.7
TPM3-213ENST00000368545 TRIM28Q13263 835 aaKnown RBP10.67□□□□□ -0.7
TPM3-213ENST00000368545 TCIRG1Q13488 830 aa10.67□□□□□ -0.7
TPM3-213ENST00000368545 NBPF20Q3BBV1 942 aa10.67□□□□□ -0.7
TPM3-213ENST00000368545 DPH6Q7L8W6 267 aa10.67□□□□□ -0.7
TPM3-213ENST00000368545 FOXJ1Q92949 421 aa10.67□□□□□ -0.7
TPM3-213ENST00000368545 ZNF358Q9NW07 568 aa10.67□□□□□ -0.7
TPM3-213ENST00000368545 PARP2Q9UGN5 583 aa10.67□□□□□ -0.7
TPM3-213ENST00000368545 NOP58Q9Y2X3 529 aaKnown RBP10.67□□□□□ -0.7
TPM3-213ENST00000368545 ESPNB1AK53 854 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 SURF6O75683 361 aaKnown RBP10.66□□□□□ -0.7
TPM3-213ENST00000368545 DDNO94850 711 aaPredicted RBP10.66□□□□□ -0.7
TPM3-213ENST00000368545 ERC1Q8IUD2 1116 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 GPC2Q8N158 579 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 KIF1BPQ96EK5 621 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 SLC10A4Q96EP9 437 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 ISCA1Q9BUE6 129 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 MYH3P11055 1940 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 NDUFB5O43674 189 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 IGFBP4P22692 258 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 ANP32AP39687 249 aaKnown RBP10.66□□□□□ -0.7
TPM3-213ENST00000368545 CRKLP46109 303 aaKnown RBP10.66□□□□□ -0.7
TPM3-213ENST00000368545 AGERQ15109 404 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 RABL6Q3YEC7 729 aaPredicted RBP10.66□□□□□ -0.7
TPM3-213ENST00000368545 UBE3BQ7Z3V4 1068 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 BAP1Q92560 729 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 KAZALD1Q96I82 304 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 BRIP1Q9BX63 1249 aa10.66□□□□□ -0.7
TPM3-213ENST00000368545 SOWAHBA6NEL2 793 aa10.65□□□□□ -0.7
TPM3-213ENST00000368545 H7C1W4 665 aa10.65□□□□□ -0.7
TPM3-213ENST00000368545 LDHBP07195 334 aaKnown RBP10.65□□□□□ -0.7
TPM3-213ENST00000368545 MAPK8P45983 427 aa10.65□□□□□ -0.7
TPM3-213ENST00000368545 CASP7P55210 303 aa10.65□□□□□ -0.7
TPM3-213ENST00000368545 DSC3Q14574 896 aa10.65□□□□□ -0.7
TPM3-213ENST00000368545 BPHLQ86WA6 291 aaPredicted RBP10.65□□□□□ -0.7
TPM3-213ENST00000368545 DUSP9Q99956 384 aaKnown RBP10.65□□□□□ -0.7
TPM3-213ENST00000368545 SAP130Q9H0E3 1048 aa10.65□□□□□ -0.7
TPM3-213ENST00000368545 OSBPL3Q9H4L5 887 aa10.65□□□□□ -0.7
TPM3-213ENST00000368545 AOX1Q06278 1338 aa10.65□□□□□ -0.71
TPM3-213ENST00000368545 EIF5BO60841 1220 aaKnown RBP10.64□□□□□ -0.71
TPM3-213ENST00000368545 EIF5P55010 431 aaKnown RBP10.64□□□□□ -0.71
TPM3-213ENST00000368545 SOX10P56693 466 aa10.64□□□□□ -0.71
TPM3-213ENST00000368545 INTS5Q6P9B9 1019 aaKnown RBP10.64□□□□□ -0.71
TPM3-213ENST00000368545 TANGO6Q9C0B7 1094 aa10.64□□□□□ -0.71
TPM3-213ENST00000368545 TSR3Q9UJK0 312 aaKnown RBP10.64□□□□□ -0.71
TPM3-213ENST00000368545 SCN7AQ01118 1682 aa10.64□□□□□ -0.71
TPM3-213ENST00000368545 TK2O00142 265 aa10.64□□□□□ -0.71
TPM3-213ENST00000368545 LINC01559Q495D7 138 aa10.64□□□□□ -0.71
TPM3-213ENST00000368545 CCDC93Q567U6 631 aa10.64□□□□□ -0.71
TPM3-213ENST00000368545 TTC22Q5TAA0 569 aa10.64□□□□□ -0.71
TPM3-213ENST00000368545 RTKN2Q8IZC4 609 aa10.64□□□□□ -0.71
TPM3-213ENST00000368545 ANKK1Q8NFD2 765 aa10.64□□□□□ -0.71
TPM3-213ENST00000368545 RHPN1Q8TCX5 695 aa10.64□□□□□ -0.71
TPM3-213ENST00000368545 SCG3Q8WXD2 468 aaKnown RBP10.64□□□□□ -0.71
TPM3-213ENST00000368545 TINF2Q9BSI4 451 aa10.64□□□□□ -0.71
TPM3-213ENST00000368545 UPF2Q9HAU5 1272 aaKnown RBP10.64□□□□□ -0.71
TPM3-213ENST00000368545 BRPF3Q9ULD4 1205 aa10.64□□□□□ -0.71
TPM3-213ENST00000368545 SALL3Q9BXA9 1300 aa10.63□□□□□ -0.71
TPM3-213ENST00000368545 TMEM229AB2RXF0 380 aa10.63□□□□□ -0.71
TPM3-213ENST00000368545 SCTRP47872 440 aa10.63□□□□□ -0.71
TPM3-213ENST00000368545 FXR1P51114 621 aaKnown RBP eCLIP10.63□□□□□ -0.71
TPM3-213ENST00000368545 COPS2P61201 443 aa10.63□□□□□ -0.71
TPM3-213ENST00000368545 OS9Q13438 667 aaPredicted RBP10.63□□□□□ -0.71
TPM3-213ENST00000368545 DNAJC2Q99543 621 aaKnown RBP10.63□□□□□ -0.71
TPM3-213ENST00000368545 NARFQ9UHQ1 456 aa10.63□□□□□ -0.71
TPM3-213ENST00000368545 AK9Q5TCS8 1911 aa10.63□□□□□ -0.71
TPM3-213ENST00000368545 SERPINB2P05120 415 aa10.63□□□□□ -0.71
TPM3-213ENST00000368545 PCCAP05165 728 aaPredicted RBP10.63□□□□□ -0.71
TPM3-213ENST00000368545 EHHADHQ08426 723 aa10.63□□□□□ -0.71
TPM3-213ENST00000368545 CC2D2BQ6DHV5 1058 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms