RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ZNF445P59923 1031 aa13.9□□□□□ -0.18
PTPRK-203ENST00000368207 GRM1Q13255 1194 aa13.9□□□□□ -0.18
PTPRK-203ENST00000368207 SEPT7Q16181 437 aaKnown RBP13.9□□□□□ -0.18
PTPRK-203ENST00000368207 TCHPQ9BT92 498 aa13.9□□□□□ -0.18
PTPRK-203ENST00000368207 PNPLA6Q8IY17 1366 aa13.9□□□□□ -0.18
PTPRK-203ENST00000368207 CHMP2AO43633 222 aa13.9□□□□□ -0.18
PTPRK-203ENST00000368207 KRT13P13646 458 aa13.9□□□□□ -0.18
PTPRK-203ENST00000368207 HLTFQ14527 1009 aaKnown RBP eCLIP13.9□□□□□ -0.18
PTPRK-203ENST00000368207 KARSQ15046 597 aaKnown RBP13.9□□□□□ -0.18
PTPRK-203ENST00000368207 PPP2R5BQ15173 497 aa13.9□□□□□ -0.18
PTPRK-203ENST00000368207 SV2BQ7L1I2 683 aa13.9□□□□□ -0.18
PTPRK-203ENST00000368207 CERS3Q8IU89 383 aa13.9□□□□□ -0.18
PTPRK-203ENST00000368207 FANCBQ8NB91 859 aa13.9□□□□□ -0.18
PTPRK-203ENST00000368207 SRP68Q9UHB9 627 aaKnown RBP13.9□□□□□ -0.18
PTPRK-203ENST00000368207 PAXBP1Q9Y5B6 917 aa13.9□□□□□ -0.18
PTPRK-203ENST00000368207 ADCY9O60503 1353 aa13.9□□□□□ -0.18
PTPRK-203ENST00000368207 NONOQ15233 471 aaKnown RBP eCLIP13.9□□□□□ -0.19
PTPRK-203ENST00000368207 DIP2BQ9P265 1576 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 BICDL2A1A5D9 508 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 RRP9O43818 475 aaKnown RBP13.89□□□□□ -0.19
PTPRK-203ENST00000368207 PDIA3P30101 505 aaKnown RBP13.89□□□□□ -0.19
PTPRK-203ENST00000368207 PLCD1P51178 756 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 SYNE4Q8N205 404 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 SCRN1Q12765 414 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 USH1GQ495M9 461 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 HS2ST1Q7LGA3 356 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 CPXCR1Q8N123 301 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 PI4K2BQ8TCG2 481 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 OSBP2Q969R2 916 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 PRIMPOLQ96LW4 560 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 ZSCAN10Q96SZ4 725 aaPredicted RBP13.89□□□□□ -0.19
PTPRK-203ENST00000368207 VPS16Q9H269 839 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 ARHGEF10LQ9HCE6 1279 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 LZTFL1Q9NQ48 299 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 TULP4Q9NRJ4 1543 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 RGS12O14924 1447 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 CCDC66A2RUB6 948 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 M0R2C6 588 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 SNAP23O00161 211 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 PDE4DQ08499 809 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 TEKT1Q969V4 418 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 CDC42BPGQ6DT37 1551 aa13.89□□□□□ -0.19
PTPRK-203ENST00000368207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
PTPRK-203ENST00000368207 ATP2B4P23634 1241 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 PRKG1Q13976 671 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 MAP9Q49MG5 647 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 SUSD4Q5VX71 490 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 TTLL11Q8NHH1 800 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 SH2D4AQ9H788 454 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 CTNND2Q9UQB3 1225 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 ERICH4A6NGS2 130 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 H7C1W4 665 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 POLR3GO15318 223 aaPredicted RBP13.88□□□□□ -0.19
PTPRK-203ENST00000368207 CCDC42Q96M95 316 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 QRICH2Q9H0J4 1663 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 BTBD18B2RXH4 712 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 BACH1O14867 736 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 CCDC175P0C221 793 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 GOLGA8HP0CJ92 632 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 NF2P35240 595 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 PNMA1Q8ND90 353 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 TRAF5O00463 557 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 PDE6BP35913 854 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 DLGAP5Q15398 846 aa13.88□□□□□ -0.19
PTPRK-203ENST00000368207 MPHOSPH6Q99547 160 aaKnown RBP13.88□□□□□ -0.19
PTPRK-203ENST00000368207 PUS7LQ9H0K6 701 aaKnown RBP13.88□□□□□ -0.19
PTPRK-203ENST00000368207 PRKAB2O43741 272 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 BTDP43251 543 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 ADCY7P51828 1080 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 DYNLL1P63167 89 aaKnown RBP13.87□□□□□ -0.19
PTPRK-203ENST00000368207 CGNQ9P2M7 1197 aaKnown RBP13.87□□□□□ -0.19
PTPRK-203ENST00000368207 PPRC1Q5VV67 1664 aaKnown RBP13.87□□□□□ -0.19
PTPRK-203ENST00000368207 CCDC113Q9H0I3 377 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 ATG3Q9NT62 314 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 LRWD1Q9UFC0 647 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 LUC7L2Q9Y383 392 aaKnown RBP13.87□□□□□ -0.19
PTPRK-203ENST00000368207 GSTTP1A0A1W2PQM5 241 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 ANKRD62A6NC57 917 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 NR1I2O75469 434 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 SLFNL1Q499Z3 407 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 C2CD5Q86YS7 1000 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 GOPCQ9HD26 462 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 LRRC7Q96NW7 1537 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 ERVV-1B6SEH8 477 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 PHACTR2O75167 634 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 SERPINB2P05120 415 aa13.87□□□□□ -0.19
PTPRK-203ENST00000368207 ERCC3P19447 782 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 KRT25Q7Z3Z0 450 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 LMTK2Q8IWU2 1503 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 RAD51AP2Q09MP3 1159 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 HS1BP3Q53T59 392 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 NOSTRINQ8IVI9 506 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 REXO1Q8N1G1 1221 aaKnown RBP13.86□□□□□ -0.19
PTPRK-203ENST00000368207 EHBP1Q8NDI1 1231 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 NEK11Q8NG66 645 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 SNX29Q8TEQ0 813 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 TBC1D5Q92609 795 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 GUCA1BQ9UMX6 200 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 NFE2L3Q9Y4A8 694 aa13.86□□□□□ -0.19
PTPRK-203ENST00000368207 PALLDQ8WX93 1383 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms