RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 PDE6AP16499 860 aa17.8■□□□□ 0.44
SF3B5-201ENST00000367569 ATP5JP18859 108 aa17.8■□□□□ 0.44
SF3B5-201ENST00000367569 MAP3K12Q12852 859 aa17.8■□□□□ 0.44
SF3B5-201ENST00000367569 PPIL2Q13356 520 aa17.8■□□□□ 0.44
SF3B5-201ENST00000367569 ANKRD45Q5TZF3 282 aa17.8■□□□□ 0.44
SF3B5-201ENST00000367569 IDI2Q9BXS1 227 aa17.8■□□□□ 0.44
SF3B5-201ENST00000367569 SAP30BPQ9UHR5 308 aaKnown RBP17.8■□□□□ 0.44
SF3B5-201ENST00000367569 POTEFA5A3E0 1075 aa17.79■□□□□ 0.44
SF3B5-201ENST00000367569 BTBD19C9JJ37 291 aa17.79■□□□□ 0.44
SF3B5-201ENST00000367569 IGHDP01880 384 aa17.79■□□□□ 0.44
SF3B5-201ENST00000367569 PPATQ06203 517 aa17.79■□□□□ 0.44
SF3B5-201ENST00000367569 SNAPC2Q13487 334 aa17.79■□□□□ 0.44
SF3B5-201ENST00000367569 HDAC1Q13547 482 aaPredicted RBP17.79■□□□□ 0.44
SF3B5-201ENST00000367569 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.79■□□□□ 0.44
SF3B5-201ENST00000367569 TGFBRAP1Q8WUH2 860 aa17.79■□□□□ 0.44
SF3B5-201ENST00000367569 HAUS7Q99871 368 aa17.79■□□□□ 0.44
SF3B5-201ENST00000367569 ECHDC1Q9NTX5 307 aa17.79■□□□□ 0.44
SF3B5-201ENST00000367569 ZNF112Q9UJU3 913 aa17.79■□□□□ 0.44
SF3B5-201ENST00000367569 BRCA2P51587 3418 aa17.79■□□□□ 0.44
SF3B5-201ENST00000367569 ZNF532Q9HCE3 1301 aa17.78■□□□□ 0.44
SF3B5-201ENST00000367569 ENTPD3O75355 529 aa17.78■□□□□ 0.44
SF3B5-201ENST00000367569 SLC9C2Q5TAH2 1124 aa17.78■□□□□ 0.44
SF3B5-201ENST00000367569 OSBPL5Q9H0X9 879 aaPredicted RBP17.78■□□□□ 0.44
SF3B5-201ENST00000367569 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.78■□□□□ 0.44
SF3B5-201ENST00000367569 PHIPQ8WWQ0 1821 aa17.77■□□□□ 0.44
SF3B5-201ENST00000367569 FLT1P17948 1338 aa17.77■□□□□ 0.44
SF3B5-201ENST00000367569 TLR2O60603 784 aa17.77■□□□□ 0.44
SF3B5-201ENST00000367569 BAG3O95817 575 aa17.77■□□□□ 0.44
SF3B5-201ENST00000367569 TTF1Q15361 905 aaPredicted RBP17.77■□□□□ 0.44
SF3B5-201ENST00000367569 ARMC5Q96C12 935 aa17.77■□□□□ 0.44
SF3B5-201ENST00000367569 GPATCH3Q96I76 525 aa17.77■□□□□ 0.44
SF3B5-201ENST00000367569 LNPKQ9C0E8 428 aa17.77■□□□□ 0.44
SF3B5-201ENST00000367569 ZSWIM8A7E2V4 1837 aa17.77■□□□□ 0.43
SF3B5-201ENST00000367569 PRPF38BQ5VTL8 546 aaKnown RBP17.76■□□□□ 0.43
SF3B5-201ENST00000367569 LCORLQ8N3X6 602 aa17.76■□□□□ 0.43
SF3B5-201ENST00000367569 ZCCHC17Q9NP64 241 aaKnown RBP17.76■□□□□ 0.43
SF3B5-201ENST00000367569 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
SF3B5-201ENST00000367569 PTPRFP10586 1907 aa17.76■□□□□ 0.43
SF3B5-201ENST00000367569 MYH8P13535 1937 aa17.76■□□□□ 0.43
SF3B5-201ENST00000367569 MKI67P46013 3256 aaKnown RBP17.75■□□□□ 0.43
SF3B5-201ENST00000367569 TCRBV5S4A2TA0A5A2 114 aa17.75■□□□□ 0.43
SF3B5-201ENST00000367569 MX1P20591 662 aa17.75■□□□□ 0.43
SF3B5-201ENST00000367569 CCDC84Q86UT8 332 aaPredicted RBP17.75■□□□□ 0.43
SF3B5-201ENST00000367569 PI4K2BQ8TCG2 481 aa17.75■□□□□ 0.43
SF3B5-201ENST00000367569 GCC1Q96CN9 775 aa17.75■□□□□ 0.43
SF3B5-201ENST00000367569 ARHGAP39Q9C0H5 1083 aa17.75■□□□□ 0.43
SF3B5-201ENST00000367569 ARMT1Q9H993 441 aa17.75■□□□□ 0.43
SF3B5-201ENST00000367569 KCNH4Q9UQ05 1017 aa17.75■□□□□ 0.43
SF3B5-201ENST00000367569 PTCH2Q9Y6C5 1203 aa17.75■□□□□ 0.43
SF3B5-201ENST00000367569 COL2A1P02458 1487 aaPredicted RBP17.75■□□□□ 0.43
SF3B5-201ENST00000367569 SALL3Q9BXA9 1300 aa17.74■□□□□ 0.43
SF3B5-201ENST00000367569 RBBP6Q7Z6E9 1792 aaKnown RBP17.74■□□□□ 0.43
SF3B5-201ENST00000367569 MAGEB6P1A0A0J9YX57 407 aa17.74■□□□□ 0.43
SF3B5-201ENST00000367569 ADD2P35612 726 aa17.74■□□□□ 0.43
SF3B5-201ENST00000367569 USP5P45974 858 aa17.74■□□□□ 0.43
SF3B5-201ENST00000367569 EVX2Q03828 476 aa17.74■□□□□ 0.43
SF3B5-201ENST00000367569 MOGSQ13724 837 aa17.74■□□□□ 0.43
SF3B5-201ENST00000367569 ARHGEF6Q15052 776 aa17.74■□□□□ 0.43
SF3B5-201ENST00000367569 NOL9Q5SY16 702 aaKnown RBP17.74■□□□□ 0.43
SF3B5-201ENST00000367569 RIOK1Q9BRS2 568 aaKnown RBP17.74■□□□□ 0.43
SF3B5-201ENST00000367569 RWDD1Q9H446 243 aaPredicted RBP17.74■□□□□ 0.43
SF3B5-201ENST00000367569 PALD1Q9ULE6 856 aa17.74■□□□□ 0.43
SF3B5-201ENST00000367569 PHF20L1A8MW92 1017 aa17.73■□□□□ 0.43
SF3B5-201ENST00000367569 MBD4O95243 580 aa17.73■□□□□ 0.43
SF3B5-201ENST00000367569 PLCG2P16885 1265 aa17.73■□□□□ 0.43
SF3B5-201ENST00000367569 PPP4CP60510 307 aa17.73■□□□□ 0.43
SF3B5-201ENST00000367569 LACTBP83111 547 aaPredicted RBP17.73■□□□□ 0.43
SF3B5-201ENST00000367569 ANKRD23Q86SG2 305 aa17.73■□□□□ 0.43
SF3B5-201ENST00000367569 SDR42E1Q8WUS8 393 aa17.73■□□□□ 0.43
SF3B5-201ENST00000367569 ZNF333Q96JL9 665 aa17.73■□□□□ 0.43
SF3B5-201ENST00000367569 PDHXO00330 501 aa17.72■□□□□ 0.43
SF3B5-201ENST00000367569 ECM2O94769 699 aaPredicted RBP17.72■□□□□ 0.43
SF3B5-201ENST00000367569 EN2P19622 333 aaPredicted RBP17.72■□□□□ 0.43
SF3B5-201ENST00000367569 SHROOM1Q2M3G4 852 aaPredicted RBP17.72■□□□□ 0.43
SF3B5-201ENST00000367569 C17orf99Q6UX52 265 aa17.72■□□□□ 0.43
SF3B5-201ENST00000367569 SMC5Q8IY18 1101 aa17.72■□□□□ 0.43
SF3B5-201ENST00000367569 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.72■□□□□ 0.43
SF3B5-201ENST00000367569 CPA4Q9UI42 421 aa17.72■□□□□ 0.43
SF3B5-201ENST00000367569 TTC41PQ6P2S7 1318 aa17.72■□□□□ 0.43
SF3B5-201ENST00000367569 PRKAB2O43741 272 aa17.71■□□□□ 0.43
SF3B5-201ENST00000367569 CTGFP29279 349 aa17.71■□□□□ 0.43
SF3B5-201ENST00000367569 AAMPQ13685 434 aa17.71■□□□□ 0.43
SF3B5-201ENST00000367569 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.71■□□□□ 0.43
SF3B5-201ENST00000367569 DNAJC18Q9H819 358 aa17.71■□□□□ 0.43
SF3B5-201ENST00000367569 MAP3K10Q02779 954 aa17.7■□□□□ 0.42
SF3B5-201ENST00000367569 RRP1BQ14684 758 aaKnown RBP17.7■□□□□ 0.42
SF3B5-201ENST00000367569 KIF22Q14807 665 aa17.7■□□□□ 0.42
SF3B5-201ENST00000367569 SLC9C1Q4G0N8 1177 aa17.7■□□□□ 0.42
SF3B5-201ENST00000367569 GPAT2Q6NUI2 795 aa17.7■□□□□ 0.42
SF3B5-201ENST00000367569 FSD1Q9BTV5 496 aa17.7■□□□□ 0.42
SF3B5-201ENST00000367569 ADGRA2Q96PE1 1338 aa17.7■□□□□ 0.42
SF3B5-201ENST00000367569 CXCL11O14625 94 aa17.69■□□□□ 0.42
SF3B5-201ENST00000367569 CYP2D6P10635 497 aa17.69■□□□□ 0.42
SF3B5-201ENST00000367569 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
SF3B5-201ENST00000367569 SCYL3Q8IZE3 742 aa17.69■□□□□ 0.42
SF3B5-201ENST00000367569 CRACR2BQ8N4Y2 399 aaPredicted RBP17.69■□□□□ 0.42
SF3B5-201ENST00000367569 KBTBD3Q8NAB2 608 aa17.69■□□□□ 0.42
SF3B5-201ENST00000367569 SH3TC2Q8TF17 1288 aa17.69■□□□□ 0.42
SF3B5-201ENST00000367569 TMEM106CQ9BVX2 250 aa17.69■□□□□ 0.42
SF3B5-201ENST00000367569 CRNKL1Q9BZJ0 848 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms