RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 VWA3AA6NCI4 1184 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 HOXA7P31268 230 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 PARP10Q53GL7 1025 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 SIRT2Q8IXJ6 389 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 LRRC45Q96CN5 670 aa13.25□□□□□ -0.29
CDC42BPA-202ENST00000366764 DNA2P51530 1060 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 GOLGA6CA6NDK9 693 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 GOLGA6BA6NDN3 693 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 GOLGA6DP0CG33 693 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 POLA2Q14181 598 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 DIS3L2Q8IYB7 885 aaKnown RBP13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 CCDC26Q8TAB7 109 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 SPTLC3Q9NUV7 552 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 GOLGA6AQ9NYA3 693 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 NLRP1Q9C000 1473 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 SSR1P43307 286 aaKnown RBP13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 IQSEC2Q5JU85 1478 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 IRS4O14654 1257 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 PRPF4BQ13523 1007 aaKnown RBP13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 XAGE2Q96GT9 111 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 CTNND2Q9UQB3 1225 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 KIF4AO95239 1232 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 PUF60Q9UHX1 559 aaKnown RBP13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 ERCC5P28715 1186 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 RUFY4Q6ZNE9 571 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 ZNF804AQ7Z570 1209 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 CARD6Q9BX69 1037 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 TBC1D8BQ0IIM8 1120 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 HDAC9Q9UKV0 1011 aa13.24□□□□□ -0.29
CDC42BPA-202ENST00000366764 PFKFB1P16118 471 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 ANKARQ7Z5J8 1434 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 PTH1RQ03431 593 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 KRBA2Q6ZNG9 492 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 CARMIL3Q8ND23 1372 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 SYCP3Q8IZU3 236 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 RNF216Q9NWF9 866 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 RCOR1Q9UKL0 485 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 ATP5DP30049 168 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 C6orf163Q5TEZ5 329 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 DENND2AQ9ULE3 1009 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 CEBPAP49715 358 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 TTC38Q5R3I4 469 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 C8orf74Q6P047 294 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 EAF2Q96CJ1 260 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 MMRN2Q9H8L6 949 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 MBD4O95243 580 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 KRT13P13646 458 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 NBPF6Q5VWK0 638 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 SARM1Q6SZW1 724 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 NBPF5PQ86XG9 351 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 NBPF4Q96M43 638 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 ATP2A1O14983 1001 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 CIAO1O76071 339 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 MCM7P33993 719 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 MED23Q9ULK4 1368 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 CCT6AP40227 531 aaKnown RBP13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
CDC42BPA-202ENST00000366764 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 ALKQ9UM73 1620 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 FAM173BQ6P4H8 233 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 LRRC59Q96AG4 307 aaKnown RBP13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 TAF5LO75529 589 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 PAK2Q13177 524 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 SV2BQ7L1I2 683 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 CAPZA3Q96KX2 299 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 CABP5Q9NP86 173 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 PCDHA7Q9UN72 937 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 OAS2P29728 719 aaKnown RBP13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 STX17P56962 302 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 IL17REQ8NFR9 667 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 LPIN2Q92539 896 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 USP28Q96RU2 1077 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 GBP6Q6ZN66 633 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 HS2ST1Q7LGA3 356 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 KRT9P35527 623 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 TRIM58Q8NG06 486 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 SAMD15Q9P1V8 674 aa13.22□□□□□ -0.29
CDC42BPA-202ENST00000366764 NUTM2BA6NNL0 878 aaPredicted RBP13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 NUTM2EB1AL46 878 aaPredicted RBP13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 NT5C2P49902 561 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 SECISBP2LQ93073 1101 aaKnown RBP13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 MTMR3Q13615 1198 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 GOLGA5Q8TBA6 731 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 FAM71BQ8TC56 605 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 DRC1Q96MC2 740 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 SAR1BQ9Y6B6 198 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 IKBKGQ9Y6K9 419 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 B4E1Z4 1266 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 CFAP221Q4G0U5 840 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 NCOA3Q9Y6Q9 1424 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 CCDC174Q6PII3 467 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 IFT74Q96LB3 600 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 ANKRD62A6NC57 917 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 MTX1Q13505 466 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 CCDC65Q8IXS2 484 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 PPP2R2CQ9Y2T4 447 aa13.21□□□□□ -0.29
CDC42BPA-202ENST00000366764 ERVV-2B6SEH9 535 aa13.21□□□□□ -0.3
CDC42BPA-202ENST00000366764 ACTN4O43707 911 aaKnown RBP13.21□□□□□ -0.3
CDC42BPA-202ENST00000366764 SLC39A14Q15043 492 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms