RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 CCAR1Q8IX12 1150 aaKnown RBP10.54□□□□□ -0.72
CALD1-202ENST00000361901 PLCD4Q9BRC7 762 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 KCNG1Q9UIX4 513 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 KCNJ14Q9UNX9 436 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 PHLPP1O60346 1717 aa10.54□□□□□ -0.72
CALD1-202ENST00000361901 XDHP47989 1333 aa10.53□□□□□ -0.72
CALD1-202ENST00000361901 CNTNAP4Q9C0A0 1308 aa10.53□□□□□ -0.72
CALD1-202ENST00000361901 MAP3K11Q16584 847 aa10.53□□□□□ -0.72
CALD1-202ENST00000361901 C2CD5Q86YS7 1000 aa10.53□□□□□ -0.72
CALD1-202ENST00000361901 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.53□□□□□ -0.72
CALD1-202ENST00000361901 ERCC4Q92889 916 aaPredicted RBP10.53□□□□□ -0.72
CALD1-202ENST00000361901 GEMIN8Q9NWZ8 242 aaKnown RBP10.53□□□□□ -0.72
CALD1-202ENST00000361901 ABCC12Q96J65 1359 aa10.53□□□□□ -0.72
CALD1-202ENST00000361901 USP17L8P0C7I0 530 aa10.53□□□□□ -0.72
CALD1-202ENST00000361901 CCDC192P0DO97 292 aa10.53□□□□□ -0.72
CALD1-202ENST00000361901 CYP2D6P10635 497 aa10.53□□□□□ -0.72
CALD1-202ENST00000361901 HNRNPH2P55795 449 aaKnown RBP10.53□□□□□ -0.72
CALD1-202ENST00000361901 GSTO1P78417 241 aa10.53□□□□□ -0.72
CALD1-202ENST00000361901 SLC51AQ86UW1 340 aa10.53□□□□□ -0.72
CALD1-202ENST00000361901 PFKFB2O60825 505 aa10.53□□□□□ -0.72
CALD1-202ENST00000361901 ADCY5O95622 1261 aa10.53□□□□□ -0.72
CALD1-202ENST00000361901 CYB5R4Q7L1T6 521 aa10.53□□□□□ -0.72
CALD1-202ENST00000361901 ARID4AP29374 1257 aaPredicted RBP10.52□□□□□ -0.72
CALD1-202ENST00000361901 NLRP5P59047 1200 aa10.52□□□□□ -0.72
CALD1-202ENST00000361901 RBM26Q5T8P6 1007 aaKnown RBP10.52□□□□□ -0.72
CALD1-202ENST00000361901 ZSCAN16Q9H4T2 348 aaPredicted RBP10.52□□□□□ -0.72
CALD1-202ENST00000361901 ARGLU1Q9NWB6 273 aaPredicted RBP10.52□□□□□ -0.72
CALD1-202ENST00000361901 TTF2Q9UNY4 1162 aaKnown RBP10.52□□□□□ -0.72
CALD1-202ENST00000361901 GYS1P13807 737 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 ZNF445P59923 1031 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 TFAP4Q01664 338 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 TTC31Q49AM3 519 aaPredicted RBP10.52□□□□□ -0.73
CALD1-202ENST00000361901 KRBA2Q6ZNG9 492 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 NSUN7Q8NE18 718 aaKnown RBP10.52□□□□□ -0.73
CALD1-202ENST00000361901 DYNLL2Q96FJ2 89 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 V9GY48 417 aaPredicted RBP10.52□□□□□ -0.73
CALD1-202ENST00000361901 NEDD4P46934 1319 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 CARMIL3Q8ND23 1372 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 PPEF1O14829 653 aaPredicted RBP10.52□□□□□ -0.73
CALD1-202ENST00000361901 TPM3P06753 285 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 GPSM2P81274 684 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 ICE2Q659A1 982 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 TMEM87BQ96K49 555 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 TRIM5Q9C035 493 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 ZBTB12Q9Y330 459 aaPredicted RBP10.52□□□□□ -0.73
CALD1-202ENST00000361901 TNKSO95271 1327 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 GSG1L2A8MUP6 293 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 TTC6Q86TZ1 520 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 SLF2Q8IX21 1173 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 WASF1Q92558 559 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 KDM3BQ7LBC6 1761 aa10.52□□□□□ -0.73
CALD1-202ENST00000361901 LRRC37A3O60309 1634 aa10.51□□□□□ -0.73
CALD1-202ENST00000361901 SCN11AQ9UI33 1791 aa10.51□□□□□ -0.73
CALD1-202ENST00000361901 A0A1B0GVL5 298 aa10.51□□□□□ -0.73
CALD1-202ENST00000361901 CCDC91Q7Z6B0 441 aa10.51□□□□□ -0.73
CALD1-202ENST00000361901 SENP2Q9HC62 589 aa10.51□□□□□ -0.73
CALD1-202ENST00000361901 FEZ2Q9UHY8 353 aaPredicted RBP10.51□□□□□ -0.73
CALD1-202ENST00000361901 CHRM1P11229 460 aaPredicted RBP10.51□□□□□ -0.73
CALD1-202ENST00000361901 BTDP43251 543 aa10.51□□□□□ -0.73
CALD1-202ENST00000361901 CCDC96Q2M329 555 aa10.51□□□□□ -0.73
CALD1-202ENST00000361901 SPECC1Q5M775 1068 aa10.51□□□□□ -0.73
CALD1-202ENST00000361901 TXLNBQ8N3L3 684 aa10.51□□□□□ -0.73
CALD1-202ENST00000361901 ZNF274Q96GC6 653 aaPredicted RBP10.51□□□□□ -0.73
CALD1-202ENST00000361901 PES1O00541 588 aaKnown RBP10.51□□□□□ -0.73
CALD1-202ENST00000361901 CHRNA5P30532 468 aa10.51□□□□□ -0.73
CALD1-202ENST00000361901 APOA5Q6Q788 366 aa10.51□□□□□ -0.73
CALD1-202ENST00000361901 KCPQ6ZWJ8 1503 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 ATP2B4P23634 1241 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 SLC20A2Q08357 652 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 DEFB132Q7Z7B7 95 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 ZNF654Q8IZM8 581 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 TMTC2Q8N394 836 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 JMYQ8N9B5 988 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 LEO1Q8WVC0 666 aaPredicted RBP10.5□□□□□ -0.73
CALD1-202ENST00000361901 USP28Q96RU2 1077 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 LEMD3Q9Y2U8 911 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 CEP83Q9Y592 693 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 SMIM22K7EJ46 135 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 NMT2O60551 498 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 LIG1P18858 919 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 FGFR2P21802 821 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 RAD51AP2Q09MP3 1159 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 BMS1Q14692 1282 aaKnown RBP10.5□□□□□ -0.73
CALD1-202ENST00000361901 CT47A1Q5JQC4 288 aaPredicted RBP10.5□□□□□ -0.73
CALD1-202ENST00000361901 KRT40Q6A162 431 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 VGLL2Q8N8G2 317 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 NCAPGQ9BPX3 1015 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 MXD3Q9BW11 206 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 ZNF287Q9HBT7 754 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 BAZ2BQ9UIF8 2168 aaKnown RBP10.5□□□□□ -0.73
CALD1-202ENST00000361901 DISP2A7MBM2 1401 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 PDE6BP35913 854 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 E2F4Q16254 413 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 SLC27A3Q5K4L6 730 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 SLC44A5Q8NCS7 719 aa10.5□□□□□ -0.73
CALD1-202ENST00000361901 ATF5Q9Y2D1 282 aaPredicted RBP10.5□□□□□ -0.73
CALD1-202ENST00000361901 PARP4Q9UKK3 1724 aaKnown RBP10.5□□□□□ -0.73
CALD1-202ENST00000361901 BBOX1O75936 387 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 ALDH1B1P30837 517 aa10.49□□□□□ -0.73
CALD1-202ENST00000361901 CACNB3P54284 484 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms