RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 LDHAL6AQ6ZMR3 332 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 DPH6Q7L8W6 267 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 TCEANC2Q96MN5 208 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 STX2P32856 288 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 HAUS1Q96CS2 278 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 ELP1O95163 1332 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 EIF2AQ9BY44 585 aaKnown RBP14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 GPHNQ9NQX3 736 aaPredicted RBP14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 DDX41Q9UJV9 622 aaKnown RBP14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 RGS16O15492 202 aaPredicted RBP14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 PDCD2Q16342 344 aaPredicted RBP14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 NOD1Q9Y239 953 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 MAIP1Q8WWC4 291 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 TRIM6Q9C030 488 aaPredicted RBP14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 ANKFY1Q9P2R3 1169 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 TRIM75PA6NK02 468 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 HDAC1Q13547 482 aaPredicted RBP14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 SLC4A8Q2Y0W8 1093 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 HAUS3Q68CZ6 603 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 SDCCAG3Q96C92 435 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 ZRANB1Q9UGI0 708 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 JDP2Q8WYK2 163 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 BEGAINQ9BUH8 593 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 PARP2Q9UGN5 583 aa14.63□□□□□ -0.07
SRGAP3-201ENST00000360413 RNF8O76064 485 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 SLC12A2P55011 1212 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 DCAF17Q5H9S7 520 aaPredicted RBP14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 MIS12Q9H081 205 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 CCDC124Q96CT7 223 aaKnown RBP14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 APOEP02649 317 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 SERPINB6P35237 376 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 KLHL7Q8IXQ5 586 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 PDZD8Q8NEN9 1154 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 ASIC3Q9UHC3 531 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 JRKLQ9Y4A0 524 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 CCT5P48643 541 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 POLE2P56282 527 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 SYCE1Q8N0S2 351 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 PSMB7Q99436 277 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 AFG3L2Q9Y4W6 797 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 RBM8AQ9Y5S9 174 aaKnown RBP14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 RUSC2Q8N2Y8 1516 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 PHEXP78562 749 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 ZKSCAN8Q15776 578 aaPredicted RBP14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 HEATR3Q7Z4Q2 680 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 PPP4R1Q8TF05 950 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 RNF34Q969K3 372 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 SETDB2Q96T68 719 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 MED4Q9NPJ6 270 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 BAG5Q9UL15 447 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 CTNNA1P35221 906 aaKnown RBP14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 BRAPQ7Z569 592 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 FAM71BQ8TC56 605 aa14.62□□□□□ -0.07
SRGAP3-201ENST00000360413 PTCD1O75127 700 aaKnown RBP14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 KRT2P35908 639 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 E2F4Q16254 413 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 NOC4LQ9BVI4 516 aaKnown RBP14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 A0A1B0GVL5 298 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 ARHGAP4P98171 946 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 INTS4Q96HW7 963 aaKnown RBP14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 M0QZ92 97 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 DTHD1Q6ZMT9 781 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 CARD10Q9BWT7 1032 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 E2F5Q15329 346 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 P3H4Q92791 437 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 TSKSQ9UJT2 592 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 ARHGAP6O43182 974 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 MPRIPQ6WCQ1 1025 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 ANKRD42Q8N9B4 389 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 NGLY1Q96IV0 654 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 IPO11Q9UI26 975 aaKnown RBP14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 TBC1D8O95759 1140 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 POLD1P28340 1107 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 EYA3Q99504 573 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 VPS16Q9H269 839 aa14.61□□□□□ -0.07
SRGAP3-201ENST00000360413 CALUO43852 315 aaPredicted RBP14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 GUCY2FP51841 1108 aa14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 ZNF445P59923 1031 aa14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 CNNM4Q6P4Q7 775 aa14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 ZKSCAN3Q9BRR0 538 aa14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 ZNF644Q9H582 1327 aaPredicted RBP14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 EIF2AK4Q9P2K8 1649 aaKnown RBP14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 FANCCQ00597 558 aa14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 SPDL1Q96EA4 605 aa14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 NR1I2O75469 434 aa14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 SCOCQ9UIL1 159 aa14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 AK2P54819 239 aa14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 RIOK1Q9BRS2 568 aaKnown RBP14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 CBX8Q9HC52 389 aa14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 SLC5A4Q9NY91 659 aa14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 GOLGA4Q13439 2230 aaKnown RBP14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 STRN3Q13033 797 aa14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 CFAP61Q8NHU2 1237 aa14.6□□□□□ -0.07
SRGAP3-201ENST00000360413 LONRF3Q496Y0 759 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 F8W8V4 182 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 SCINQ9Y6U3 715 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 SYNRGQ9UMZ2 1314 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 IQUBQ8NA54 791 aa14.59□□□□□ -0.07
SRGAP3-201ENST00000360413 TBC1D8BQ0IIM8 1120 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms