RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 VPS37CA5D8V6 355 aaPredicted RBP16.2■□□□□ 0.18
CSNK1E-201ENST00000359867 HMGN5P82970 282 aaKnown RBP16.2■□□□□ 0.18
CSNK1E-201ENST00000359867 RNF181Q9P0P0 153 aa16.2■□□□□ 0.18
CSNK1E-201ENST00000359867 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
CSNK1E-201ENST00000359867 DAGLAQ9Y4D2 1042 aa16.2■□□□□ 0.18
CSNK1E-201ENST00000359867 FZD9O00144 591 aa16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 DTNBO60941 627 aa16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 GSTO1P78417 241 aa16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 PAXIP1Q6ZW49 1069 aaPredicted RBP16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 USP48Q86UV5 1035 aa16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 SDR42E1Q8WUS8 393 aa16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 NOL7Q9UMY1 257 aaKnown RBP16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 SUGT1Q9Y2Z0 365 aa16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 GJA3Q9Y6H8 435 aa16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 PRC1O43663 620 aa16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 GADD45BO75293 160 aaPredicted RBP16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 PDIA3P30101 505 aaKnown RBP16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 BTDP43251 543 aa16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 IFNL3Q8IZI9 196 aa16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 SLC4A4Q9Y6R1 1079 aa16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 DICER1Q9UPY3 1922 aaKnown RBP16.19■□□□□ 0.18
CSNK1E-201ENST00000359867 SHTN1A0MZ66 631 aa16.18■□□□□ 0.18
CSNK1E-201ENST00000359867 FKBP1AP62942 108 aaKnown RBP16.18■□□□□ 0.18
CSNK1E-201ENST00000359867 TMED8Q6PL24 325 aaPredicted RBP16.18■□□□□ 0.18
CSNK1E-201ENST00000359867 NACAP1Q9BZK3 213 aa16.18■□□□□ 0.18
CSNK1E-201ENST00000359867 RBM5P52756 815 aaKnown RBP eCLIP16.18■□□□□ 0.182e-8■■■□□ 16.5
CSNK1E-201ENST00000359867 EIF6P56537 245 aaKnown RBP16.18■□□□□ 0.18
CSNK1E-201ENST00000359867 GMLQ99445 158 aa16.18■□□□□ 0.18
CSNK1E-201ENST00000359867 NBPF3Q9H094 633 aa16.18■□□□□ 0.18
CSNK1E-201ENST00000359867 NAPBQ9H115 298 aa16.18■□□□□ 0.18
CSNK1E-201ENST00000359867 EPB41L4AQ9HCS5 686 aaPredicted RBP16.18■□□□□ 0.18
CSNK1E-201ENST00000359867 LDHCP07864 332 aa16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 CRKP46108 304 aa16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 C9orf131Q5VYM1 1079 aa16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 NSUN7Q8NE18 718 aaKnown RBP16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 SH3RF3Q8TEJ3 882 aaPredicted RBP16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 GAKO14976 1311 aa16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 GSG1L2A8MUP6 293 aa16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 IGSF3O75054 1194 aa16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 ANTXR2P58335 489 aa16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 DMTNQ08495 405 aa16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 CHST3Q7LGC8 479 aa16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 TEKT1Q969V4 418 aa16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 MAP7D2Q96T17 732 aa16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 CNPY2Q9Y2B0 182 aa16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 TIAM2Q8IVF5 1701 aa16.17■□□□□ 0.18
CSNK1E-201ENST00000359867 JAK2O60674 1132 aa16.16■□□□□ 0.18
CSNK1E-201ENST00000359867 TBC1D10CQ8IV04 446 aa16.16■□□□□ 0.18
CSNK1E-201ENST00000359867 FAM184AQ8NB25 1140 aa16.16■□□□□ 0.18
CSNK1E-201ENST00000359867 SYAP1Q96A49 352 aaPredicted RBP16.16■□□□□ 0.18
CSNK1E-201ENST00000359867 ZKSCAN5Q9Y2L8 839 aa16.16■□□□□ 0.18
CSNK1E-201ENST00000359867 MYO3BQ8WXR4 1341 aa16.16■□□□□ 0.18
CSNK1E-201ENST00000359867 GPR75-ASB3A0A0A6YYF3 556 aa16.16■□□□□ 0.18
CSNK1E-201ENST00000359867 TNIP1Q15025 636 aa16.16■□□□□ 0.18
CSNK1E-201ENST00000359867 CDC37L1Q7L3B6 337 aa16.16■□□□□ 0.18
CSNK1E-201ENST00000359867 SLF2Q8IX21 1173 aa16.16■□□□□ 0.18
CSNK1E-201ENST00000359867 NOL10Q9BSC4 688 aaKnown RBP16.16■□□□□ 0.18
CSNK1E-201ENST00000359867 DHX16O60231 1041 aaKnown RBP16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 FAM163AQ96GL9 167 aaPredicted RBP16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 TMEM87BQ96K49 555 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 CNNM2Q9H8M5 875 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 CTDNEP1O95476 244 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 BAG3O95817 575 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 UBE2HP62256 183 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 APOBEC3HQ6NTF7 200 aaKnown RBP16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 TMEM51Q9NW97 253 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 BAZ2AQ9UIF9 1905 aaKnown RBP16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 VGLL3A8MV65 326 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 PTMAP06454 111 aaKnown RBP16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 USP17L8P0C7I0 530 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 GMPSP49915 693 aaPredicted RBP16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 DNM1Q05193 864 aaKnown RBP16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 SLC4A8Q2Y0W8 1093 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 CFAP100Q494V2 611 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 HS1BP3Q53T59 392 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 HHIPL2Q6UWX4 724 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 AGBL3Q8NEM8 1001 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 IPO4Q8TEX9 1081 aaKnown RBP16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 TSPY26PQ9H489 355 aa16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 ZSCAN16Q9H4T2 348 aaPredicted RBP16.15■□□□□ 0.18
CSNK1E-201ENST00000359867 PTPDC1A2A3K4 754 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 ZNF500O60304 480 aaPredicted RBP16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 ZSCAN20P17040 1043 aaPredicted RBP16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 RHBDL3P58872 404 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 CCT2P78371 535 aaKnown RBP16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 KRT85P78386 507 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 OGFOD1Q8N543 542 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 KRT23Q9C075 422 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 UQCRHLA0A096LP55 91 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 SMIM22K7EJ46 135 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 GRIN3BO60391 1043 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 UQCRHP07919 91 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 CACNB3P54284 484 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 PPP4CP60510 307 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 PPP4R3BQ5MIZ7 849 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 TGFBRAP1Q8WUH2 860 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 ZDHHC15Q96MV8 337 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 CRNKL1Q9BZJ0 848 aaKnown RBP16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 SERPINA10Q9UK55 444 aa16.14■□□□□ 0.17
CSNK1E-201ENST00000359867 ANGEL1Q9UNK9 670 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms