RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 PTPRFP10586 1907 aa19.72■□□□□ 0.75
IFT20-202ENST00000357896 SLURP2P0DP57 97 aa19.71■□□□□ 0.75
IFT20-202ENST00000357896 BTDP43251 543 aa19.71■□□□□ 0.75
IFT20-202ENST00000357896 PHKA1P46020 1223 aa19.71■□□□□ 0.75
IFT20-202ENST00000357896 MAP3K21Q5TCX8 1036 aa19.71■□□□□ 0.75
IFT20-202ENST00000357896 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.71■□□□□ 0.75
IFT20-202ENST00000357896 TRMT44Q8IYL2 757 aaKnown RBP19.71■□□□□ 0.75
IFT20-202ENST00000357896 MRPL50Q8N5N7 158 aaKnown RBP19.71■□□□□ 0.75
IFT20-202ENST00000357896 ASCC2Q9H1I8 757 aaPredicted RBP19.71■□□□□ 0.75
IFT20-202ENST00000357896 ABCF2Q9UG63 623 aa19.71■□□□□ 0.75
IFT20-202ENST00000357896 DOCK3Q8IZD9 2030 aa19.71■□□□□ 0.75
IFT20-202ENST00000357896 PHIPQ8WWQ0 1821 aa19.7■□□□□ 0.74
IFT20-202ENST00000357896 XRCC5P13010 732 aaKnown RBP19.7■□□□□ 0.74
IFT20-202ENST00000357896 HMGCS2P54868 508 aa19.7■□□□□ 0.74
IFT20-202ENST00000357896 FAM109BQ6ICB4 259 aaPredicted RBP19.7■□□□□ 0.74
IFT20-202ENST00000357896 TRIB2Q92519 343 aa19.7■□□□□ 0.74
IFT20-202ENST00000357896 SIL1Q9H173 461 aa19.7■□□□□ 0.74
IFT20-202ENST00000357896 MORF4L1Q9UBU8 362 aa19.7■□□□□ 0.74
IFT20-202ENST00000357896 PDS5AQ29RF7 1337 aaKnown RBP19.7■□□□□ 0.74
IFT20-202ENST00000357896 MAP4K4O95819 1239 aaPredicted RBP19.69■□□□□ 0.74
IFT20-202ENST00000357896 PRKAR2AP13861 404 aaKnown RBP19.69■□□□□ 0.74
IFT20-202ENST00000357896 CYP2B6P20813 491 aa19.69■□□□□ 0.74
IFT20-202ENST00000357896 IL15P40933 162 aaPredicted RBP19.69■□□□□ 0.74
IFT20-202ENST00000357896 SH3D19Q5HYK7 790 aa19.69■□□□□ 0.74
IFT20-202ENST00000357896 CCDC102BQ68D86 513 aa19.69■□□□□ 0.74
IFT20-202ENST00000357896 SOCS4Q8WXH5 440 aa19.69■□□□□ 0.74
IFT20-202ENST00000357896 NUDT12Q9BQG2 462 aa19.69■□□□□ 0.74
IFT20-202ENST00000357896 AS3MTQ9HBK9 375 aa19.69■□□□□ 0.74
IFT20-202ENST00000357896 MROH7-TTC4A0A0A0MT08 1334 aa19.69■□□□□ 0.74
IFT20-202ENST00000357896 DDX60LQ5H9U9 1706 aaKnown RBP19.68■□□□□ 0.74
IFT20-202ENST00000357896 GPR75-ASB3A0A0A6YYF3 556 aa19.68■□□□□ 0.74
IFT20-202ENST00000357896 USP17L5A8MUK1 530 aa19.68■□□□□ 0.74
IFT20-202ENST00000357896 COL6A1P12109 1028 aa19.68■□□□□ 0.74
IFT20-202ENST00000357896 PFASO15067 1338 aa19.68■□□□□ 0.74
IFT20-202ENST00000357896 MYH2Q9UKX2 1941 aa19.68■□□□□ 0.74
IFT20-202ENST00000357896 POTEB2H3BUK9 544 aa19.67■□□□□ 0.74
IFT20-202ENST00000357896 CAP2P40123 477 aa19.67■□□□□ 0.74
IFT20-202ENST00000357896 IRX3P78415 501 aaPredicted RBP19.67■□□□□ 0.74
IFT20-202ENST00000357896 RASGRF1Q13972 1273 aa19.67■□□□□ 0.74
IFT20-202ENST00000357896 PDE3AQ14432 1141 aa19.67■□□□□ 0.74
IFT20-202ENST00000357896 GPRC5AQ8NFJ5 357 aa19.67■□□□□ 0.74
IFT20-202ENST00000357896 RHBDL3P58872 404 aa19.66■□□□□ 0.74
IFT20-202ENST00000357896 ERICH6Q7L0X2 663 aa19.66■□□□□ 0.74
IFT20-202ENST00000357896 FAM196BA6NMK8 535 aa19.65■□□□□ 0.74
IFT20-202ENST00000357896 LDHCP07864 332 aa19.65■□□□□ 0.74
IFT20-202ENST00000357896 ZKSCAN1P17029 563 aaPredicted RBP19.65■□□□□ 0.74
IFT20-202ENST00000357896 ADORA1P30542 326 aa19.65■□□□□ 0.74
IFT20-202ENST00000357896 MAPK4P31152 587 aa19.65■□□□□ 0.74
IFT20-202ENST00000357896 HOXA7P31268 230 aaPredicted RBP19.65■□□□□ 0.74
IFT20-202ENST00000357896 GSTO1P78417 241 aa19.65■□□□□ 0.74
IFT20-202ENST00000357896 MDM2Q00987 491 aaPredicted RBP19.65■□□□□ 0.74
IFT20-202ENST00000357896 MECOMQ03112 1051 aa19.65■□□□□ 0.74
IFT20-202ENST00000357896 CCAR1Q8IX12 1150 aaKnown RBP19.65■□□□□ 0.74
IFT20-202ENST00000357896 LBHD1Q9BQE6 289 aaPredicted RBP19.65■□□□□ 0.74
IFT20-202ENST00000357896 TMOD4Q9NZQ9 345 aa19.65■□□□□ 0.74
IFT20-202ENST00000357896 HERC5Q9UII4 1024 aaKnown RBP19.65■□□□□ 0.74
IFT20-202ENST00000357896 HDAC5Q9UQL6 1122 aa19.65■□□□□ 0.74
IFT20-202ENST00000357896 LOC285556D6RIA3 1793 aa19.65■□□□□ 0.74
IFT20-202ENST00000357896 UBTFL1P0CB47 393 aaPredicted RBP19.64■□□□□ 0.73
IFT20-202ENST00000357896 CACNB2Q08289 660 aaPredicted RBP19.64■□□□□ 0.73
IFT20-202ENST00000357896 LRRC26Q2I0M4 334 aa19.64■□□□□ 0.73
IFT20-202ENST00000357896 P2RX7Q99572 595 aaKnown RBP19.64■□□□□ 0.73
IFT20-202ENST00000357896 WDR18Q9BV38 432 aa19.64■□□□□ 0.73
IFT20-202ENST00000357896 COL2A1P02458 1487 aaPredicted RBP19.64■□□□□ 0.73
IFT20-202ENST00000357896 RGS2P41220 211 aa19.63■□□□□ 0.73
IFT20-202ENST00000357896 BACE1P56817 501 aa19.63■□□□□ 0.73
IFT20-202ENST00000357896 LHX8Q68G74 356 aa19.63■□□□□ 0.73
IFT20-202ENST00000357896 GUCD1Q96NT3 240 aa19.63■□□□□ 0.73
IFT20-202ENST00000357896 LAMA2P24043 3122 aaKnown RBP19.63■□□□□ 0.73
IFT20-202ENST00000357896 C19orf81C9J6K1 198 aa19.62■□□□□ 0.73
IFT20-202ENST00000357896 TIMM10P62072 90 aa19.62■□□□□ 0.73
IFT20-202ENST00000357896 HERVK_113P62684 666 aa19.62■□□□□ 0.73
IFT20-202ENST00000357896 MTMR2Q13614 643 aa19.62■□□□□ 0.73
IFT20-202ENST00000357896 MVPQ14764 893 aaKnown RBP19.62■□□□□ 0.73
IFT20-202ENST00000357896 GTF3C2Q8WUA4 911 aaPredicted RBP19.62■□□□□ 0.73
IFT20-202ENST00000357896 SSH1Q8WYL5 1049 aa19.62■□□□□ 0.73
IFT20-202ENST00000357896 COPRSQ9NQ92 184 aa19.62■□□□□ 0.73
IFT20-202ENST00000357896 AKAP2Q9Y2D5 859 aa19.62■□□□□ 0.73
IFT20-202ENST00000357896 ASNSP08243 561 aa19.61■□□□□ 0.73
IFT20-202ENST00000357896 POTEDQ86YR6 584 aa19.61■□□□□ 0.73
IFT20-202ENST00000357896 USP6NLQ92738 828 aa19.61■□□□□ 0.73
IFT20-202ENST00000357896 PI4KBQ9UBF8 816 aa19.61■□□□□ 0.73
IFT20-202ENST00000357896 VCANP13611 3396 aa19.61■□□□□ 0.73
IFT20-202ENST00000357896 CCND3P30281 292 aaPredicted RBP19.6■□□□□ 0.73
IFT20-202ENST00000357896 RRP1BQ14684 758 aaKnown RBP19.6■□□□□ 0.73
IFT20-202ENST00000357896 ZNF697Q5TEC3 545 aa19.6■□□□□ 0.73
IFT20-202ENST00000357896 DHX36Q9H2U1 1008 aaKnown RBP19.6■□□□□ 0.73
IFT20-202ENST00000357896 TXNRD2Q9NNW7 524 aa19.6■□□□□ 0.73
IFT20-202ENST00000357896 RBPJLQ9UBG7 517 aa19.6■□□□□ 0.73
IFT20-202ENST00000357896 PRKAG2Q9UGJ0 569 aa19.6■□□□□ 0.73
IFT20-202ENST00000357896 PLXNB2O15031 1838 aa19.6■□□□□ 0.73
IFT20-202ENST00000357896 ERVK-9P63128 1117 aa19.59■□□□□ 0.73
IFT20-202ENST00000357896 ERVK-24P63145 666 aa19.59■□□□□ 0.73
IFT20-202ENST00000357896 MORN1Q5T089 497 aa19.59■□□□□ 0.73
IFT20-202ENST00000357896 GPR142Q7Z601 462 aa19.59■□□□□ 0.73
IFT20-202ENST00000357896 PLEKHH3Q7Z736 793 aa19.59■□□□□ 0.73
IFT20-202ENST00000357896 ZNF384Q8TF68 577 aa19.59■□□□□ 0.73
IFT20-202ENST00000357896 NSUN4Q96CB9 384 aaKnown RBP19.59■□□□□ 0.73
IFT20-202ENST00000357896 XAGE2Q96GT9 111 aa19.59■□□□□ 0.73
IFT20-202ENST00000357896 FAM161BQ96MY7 647 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms