RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 BPIFA3Q9BQP9 254 aa28.81■■■□□ 2.2
HDGF-201ENST00000357325 CICQ96RK0 1608 aaPredicted RBP28.81■■■□□ 2.2
HDGF-201ENST00000357325 STK36Q9NRP7 1315 aa28.8■■■□□ 2.2
HDGF-201ENST00000357325 PTPN21Q16825 1174 aa28.8■■■□□ 2.2
HDGF-201ENST00000357325 CCDC24Q8N4L8 307 aa28.8■■■□□ 2.2
HDGF-201ENST00000357325 CELF1Q92879 486 aaKnown RBP28.8■■■□□ 2.2
HDGF-201ENST00000357325 CDCA7Q9BWT1 371 aaPredicted RBP28.8■■■□□ 2.2
HDGF-201ENST00000357325 PRDM1O75626 825 aa28.8■■■□□ 2.2
HDGF-201ENST00000357325 ZNF654Q8IZM8 581 aa28.8■■■□□ 2.2
HDGF-201ENST00000357325 CRACR2BQ8N4Y2 399 aaPredicted RBP28.8■■■□□ 2.2
HDGF-201ENST00000357325 TUBE1Q9UJT0 475 aa28.8■■■□□ 2.2
HDGF-201ENST00000357325 ZNF804BA4D1E1 1349 aa28.79■■■□□ 2.2
HDGF-201ENST00000357325 RREB1Q92766 1687 aa28.79■■■□□ 2.2
HDGF-201ENST00000357325 ATP2B1P20020 1258 aa28.79■■■□□ 2.2
HDGF-201ENST00000357325 RIOK1Q9BRS2 568 aaKnown RBP28.79■■■□□ 2.2
HDGF-201ENST00000357325 AHDC1Q5TGY3 1603 aaPredicted RBP28.79■■■□□ 2.2
HDGF-201ENST00000357325 NRAPQ86VF7 1730 aa28.79■■■□□ 2.2
HDGF-201ENST00000357325 MAGEB6P1A0A0J9YX57 407 aa28.79■■■□□ 2.2
HDGF-201ENST00000357325 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.79■■■□□ 2.2
HDGF-201ENST00000357325 SPATA31A5Q5VU36 1347 aa28.78■■■□□ 2.2
HDGF-201ENST00000357325 SPATA31A7Q8IWB4 1347 aa28.78■■■□□ 2.2
HDGF-201ENST00000357325 TMC6Q7Z403 805 aa28.78■■■□□ 2.2
HDGF-201ENST00000357325 ANKRD18AQ8IVF6 992 aa28.78■■■□□ 2.2
HDGF-201ENST00000357325 FANCBQ8NB91 859 aa28.78■■■□□ 2.2
HDGF-201ENST00000357325 RGS22Q8NE09 1264 aa28.78■■■□□ 2.2
HDGF-201ENST00000357325 ZNF592Q92610 1267 aa28.78■■■□□ 2.2
HDGF-201ENST00000357325 THRAP3Q9Y2W1 955 aaKnown RBP28.78■■■□□ 2.2
HDGF-201ENST00000357325 PCDHB6Q9Y5E3 794 aa28.78■■■□□ 2.2
HDGF-201ENST00000357325 FAM205CA6NFA0 338 aa28.77■■■□□ 2.2
HDGF-201ENST00000357325 TIGD1Q96MW7 591 aa28.77■■■□□ 2.2
HDGF-201ENST00000357325 CDC5LQ99459 802 aaKnown RBP28.77■■■□□ 2.2
HDGF-201ENST00000357325 KCNH3Q9ULD8 1083 aa28.77■■■□□ 2.2
HDGF-201ENST00000357325 MINPP1Q9UNW1 487 aa28.77■■■□□ 2.2
HDGF-201ENST00000357325 TNKSO95271 1327 aa28.77■■■□□ 2.2
HDGF-201ENST00000357325 NAA30Q147X3 362 aaPredicted RBP28.77■■■□□ 2.2
HDGF-201ENST00000357325 ARMCX5Q6P1M9 558 aa28.77■■■□□ 2.2
HDGF-201ENST00000357325 JMYQ8N9B5 988 aa28.77■■■□□ 2.2
HDGF-201ENST00000357325 DPF2Q92785 391 aa28.77■■■□□ 2.2
HDGF-201ENST00000357325 FAM237AA0A1B0GTK4 181 aa28.76■■■□□ 2.2
HDGF-201ENST00000357325 ERICH2A1L162 156 aa28.76■■■□□ 2.2
HDGF-201ENST00000357325 BMP6P22004 513 aa28.76■■■□□ 2.2
HDGF-201ENST00000357325 SART3Q15020 963 aaKnown RBP28.76■■■□□ 2.2
HDGF-201ENST00000357325 SEC23AQ15436 765 aa28.76■■■□□ 2.2
HDGF-201ENST00000357325 MAP7D2Q96T17 732 aa28.76■■■□□ 2.2
HDGF-201ENST00000357325 NID2Q14112 1375 aa28.76■■■□□ 2.19
HDGF-201ENST00000357325 CUTAO60888 179 aa28.76■■■□□ 2.19
HDGF-201ENST00000357325 FAM84BQ96KN1 310 aaPredicted RBP28.76■■■□□ 2.19
HDGF-201ENST00000357325 SLC51AQ86UW1 340 aa28.75■■■□□ 2.19
HDGF-201ENST00000357325 UBAC1Q9BSL1 405 aa28.75■■■□□ 2.19
HDGF-201ENST00000357325 PCDHA5Q9Y5H7 936 aa28.75■■■□□ 2.19
HDGF-201ENST00000357325 LAMB2P55268 1798 aa28.75■■■□□ 2.19
HDGF-201ENST00000357325 BAZ2AQ9UIF9 1905 aaKnown RBP28.75■■■□□ 2.19
HDGF-201ENST00000357325 PDE4BQ07343 736 aa28.75■■■□□ 2.19
HDGF-201ENST00000357325 TBC1D9BQ66K14 1250 aa28.75■■■□□ 2.19
HDGF-201ENST00000357325 KRBA2Q6ZNG9 492 aa28.75■■■□□ 2.19
HDGF-201ENST00000357325 TRIM22Q8IYM9 498 aa28.75■■■□□ 2.19
HDGF-201ENST00000357325 CACNA1SQ13698 1873 aa28.74■■■□□ 2.19
HDGF-201ENST00000357325 USP49Q70CQ1 688 aa28.74■■■□□ 2.19
HDGF-201ENST00000357325 KRI1Q8N9T8 703 aaKnown RBP28.74■■■□□ 2.19
HDGF-201ENST00000357325 CNNM3Q8NE01 707 aa28.74■■■□□ 2.19
HDGF-201ENST00000357325 OSBPL5Q9H0X9 879 aaPredicted RBP28.74■■■□□ 2.19
HDGF-201ENST00000357325 CTIFO43310 598 aaKnown RBP28.74■■■□□ 2.19
HDGF-201ENST00000357325 FANCCQ00597 558 aa28.74■■■□□ 2.19
HDGF-201ENST00000357325 EARS2Q5JPH6 523 aaKnown RBP28.74■■■□□ 2.19
HDGF-201ENST00000357325 GRAMD1CQ8IYS0 662 aa28.74■■■□□ 2.19
HDGF-201ENST00000357325 ENAHQ8N8S7 591 aaPredicted RBP28.74■■■□□ 2.19
HDGF-201ENST00000357325 FBXO2Q9UK22 296 aaPredicted RBP28.74■■■□□ 2.19
HDGF-201ENST00000357325 MYH2Q9UKX2 1941 aa28.73■■■□□ 2.19
HDGF-201ENST00000357325 HSP90AA4PQ58FG1 418 aa28.73■■■□□ 2.19
HDGF-201ENST00000357325 ZNF652Q9Y2D9 606 aa28.73■■■□□ 2.19
HDGF-201ENST00000357325 DEXIO95424 95 aa28.73■■■□□ 2.19
HDGF-201ENST00000357325 PRR29P0C7W0 189 aa28.73■■■□□ 2.19
HDGF-201ENST00000357325 BSDC1Q9NW68 430 aaPredicted RBP28.73■■■□□ 2.19
HDGF-201ENST00000357325 VPS54Q9P1Q0 977 aa28.73■■■□□ 2.19
HDGF-201ENST00000357325 JAG2Q9Y219 1238 aa28.73■■■□□ 2.19
HDGF-201ENST00000357325 NEMFO60524 1076 aa28.72■■■□□ 2.19
HDGF-201ENST00000357325 CEP135Q66GS9 1140 aa28.72■■■□□ 2.19
HDGF-201ENST00000357325 WASF1Q92558 559 aa28.72■■■□□ 2.19
HDGF-201ENST00000357325 RNF41Q9H4P4 317 aaPredicted RBP28.72■■■□□ 2.19
HDGF-201ENST00000357325 CABP5Q9NP86 173 aa28.72■■■□□ 2.19
HDGF-201ENST00000357325 PLEKHA8P1O95397 391 aa28.72■■■□□ 2.19
HDGF-201ENST00000357325 MDM2Q00987 491 aaPredicted RBP28.72■■■□□ 2.19
HDGF-201ENST00000357325 SF3B3Q15393 1217 aaKnown RBP28.72■■■□□ 2.19
HDGF-201ENST00000357325 SAFBQ15424 915 aaKnown RBP eCLIP28.72■■■□□ 2.19
HDGF-201ENST00000357325 FAM98CQ17RN3 349 aaKnown RBP28.72■■■□□ 2.19
HDGF-201ENST00000357325 TFCP2L1Q9NZI6 479 aa28.72■■■□□ 2.19
HDGF-201ENST00000357325 SRP68Q9UHB9 627 aaKnown RBP28.72■■■□□ 2.19
HDGF-201ENST00000357325 NYAP1Q6ZVC0 841 aa28.71■■■□□ 2.19
HDGF-201ENST00000357325 CCAR2Q8N163 923 aaKnown RBP28.71■■■□□ 2.19
HDGF-201ENST00000357325 A0A1B0GUL6 1792 aa28.71■■■□□ 2.19
HDGF-201ENST00000357325 SMTNL1A8MU46 457 aa28.7■■■□□ 2.19
HDGF-201ENST00000357325 WNT7AO00755 349 aa28.7■■■□□ 2.19
HDGF-201ENST00000357325 PKN1Q16512 942 aa28.7■■■□□ 2.19
HDGF-201ENST00000357325 NOM1Q5C9Z4 860 aaKnown RBP28.7■■■□□ 2.19
HDGF-201ENST00000357325 PDILTQ8N807 584 aa28.7■■■□□ 2.19
HDGF-201ENST00000357325 ESR2Q92731 530 aa28.7■■■□□ 2.19
HDGF-201ENST00000357325 NMT2O60551 498 aa28.7■■■□□ 2.18
HDGF-201ENST00000357325 UBE4AQ14139 1066 aa28.7■■■□□ 2.18
HDGF-201ENST00000357325 FOXP1Q9H334 677 aaPredicted RBP28.7■■■□□ 2.18
HDGF-201ENST00000357325 ANAPC4Q9UJX5 808 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms