RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 AKAP2Q9Y2D5 859 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 MFAP3LO75121 409 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 VSNL1P62760 191 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 AMOTL1Q8IY63 956 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 IP6K1Q92551 441 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 ITIH6Q6UXX5 1313 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 NEURL1BA8MQ27 555 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 N4BP3O15049 544 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 GOLGA8FQ08AF8 430 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 GOLGA8DPQ0D2H9 430 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 NR1I3Q14994 352 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 SART3Q15020 963 aaKnown RBP13.9□□□□□ -0.18
TRERF1-202ENST00000354325 CCDC50Q8IVM0 306 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 CAPS2Q9BXY5 557 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 SYNRGQ9UMZ2 1314 aa13.9□□□□□ -0.18
TRERF1-202ENST00000354325 ABCC6O95255 1503 aa13.9□□□□□ -0.19
TRERF1-202ENST00000354325 FDPSP14324 419 aaKnown RBP13.89□□□□□ -0.19
TRERF1-202ENST00000354325 CYLC1P35663 651 aaPredicted RBP13.89□□□□□ -0.19
TRERF1-202ENST00000354325 TMEM87BQ96K49 555 aa13.89□□□□□ -0.19
TRERF1-202ENST00000354325 ANGEL1Q9UNK9 670 aaKnown RBP13.89□□□□□ -0.19
TRERF1-202ENST00000354325 SAR1BQ9Y6B6 198 aa13.89□□□□□ -0.19
TRERF1-202ENST00000354325 HSF2BPO75031 334 aa13.89□□□□□ -0.19
TRERF1-202ENST00000354325 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
TRERF1-202ENST00000354325 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRERF1-202ENST00000354325 SOWAHDA6NJG2 315 aa13.89□□□□□ -0.19
TRERF1-202ENST00000354325 USP14P54578 494 aa13.89□□□□□ -0.19
TRERF1-202ENST00000354325 APBA1Q02410 837 aa13.89□□□□□ -0.19
TRERF1-202ENST00000354325 COG1Q8WTW3 980 aa13.89□□□□□ -0.19
TRERF1-202ENST00000354325 CABS1Q96KC9 395 aa13.89□□□□□ -0.19
TRERF1-202ENST00000354325 TBC1D2BQ9UPU7 963 aa13.89□□□□□ -0.19
TRERF1-202ENST00000354325 ROBO2Q9HCK4 1378 aa13.89□□□□□ -0.19
TRERF1-202ENST00000354325 NALCNQ8IZF0 1738 aa13.89□□□□□ -0.19
TRERF1-202ENST00000354325 ZNF18P17022 549 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 MRPL44Q9H9J2 332 aaKnown RBP13.88□□□□□ -0.19
TRERF1-202ENST00000354325 PEAK1Q9H792 1746 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 OVOS2A0A0G2JMS6 1433 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 ZBTB43O43298 467 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 KCNA6P17658 529 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 SHC4Q6S5L8 630 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 PNKPQ96T60 521 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 CEP126Q9P2H0 1117 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 LOC102724159A0A0B4J2E5 919 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 GOLGA8AA7E2F4 631 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 PWP2Q15269 919 aaKnown RBP13.88□□□□□ -0.19
TRERF1-202ENST00000354325 MPRIPQ6WCQ1 1025 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 ANKRD13DQ6ZTN6 518 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 LGR6Q9HBX8 967 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 RMND1Q9NWS8 449 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 CEP83Q9Y592 693 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 RBL2Q08999 1139 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 LONRF3Q496Y0 759 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 CHST3Q7LGC8 479 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 METTL16Q86W50 562 aaKnown RBP13.88□□□□□ -0.19
TRERF1-202ENST00000354325 TSGA10Q9BZW7 698 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 MAGEC2Q9UBF1 373 aaPredicted RBP13.88□□□□□ -0.19
TRERF1-202ENST00000354325 FAM169AQ9Y6X4 670 aa13.88□□□□□ -0.19
TRERF1-202ENST00000354325 FMN2Q9NZ56 1722 aa13.87□□□□□ -0.19
TRERF1-202ENST00000354325 ERICH2A1L162 156 aa13.87□□□□□ -0.19
TRERF1-202ENST00000354325 TMCO5BA8MYB1 307 aa13.87□□□□□ -0.19
TRERF1-202ENST00000354325 MORC3Q14149 939 aa13.87□□□□□ -0.19
TRERF1-202ENST00000354325 BCAS4Q8TDM0 211 aa13.87□□□□□ -0.19
TRERF1-202ENST00000354325 CXorf56Q9H5V9 222 aa13.87□□□□□ -0.19
TRERF1-202ENST00000354325 NF2P35240 595 aa13.87□□□□□ -0.19
TRERF1-202ENST00000354325 HSP90AA4PQ58FG1 418 aa13.87□□□□□ -0.19
TRERF1-202ENST00000354325 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRERF1-202ENST00000354325 POLR2DO15514 142 aaKnown RBP13.87□□□□□ -0.19
TRERF1-202ENST00000354325 USO1O60763 962 aaKnown RBP13.87□□□□□ -0.19
TRERF1-202ENST00000354325 PPFIA3O75145 1194 aa13.87□□□□□ -0.19
TRERF1-202ENST00000354325 CCT5P48643 541 aa13.87□□□□□ -0.19
TRERF1-202ENST00000354325 CCDC47Q96A33 483 aaKnown RBP13.87□□□□□ -0.19
TRERF1-202ENST00000354325 LIG3P49916 1009 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 KLHL10Q6JEL2 608 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 WDR17Q8IZU2 1322 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 NDUFAB1O14561 156 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 NFATC2IPQ8NCF5 419 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 GSDMAQ96QA5 445 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 MROH7-TTC4A0A0A0MT08 1334 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 MAST3O60307 1309 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 A0A087WZG4 1122 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 LTKP29376 864 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 PTPN12Q05209 780 aaKnown RBP13.86□□□□□ -0.19
TRERF1-202ENST00000354325 NT5DC1Q5TFE4 455 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 CCDC181Q5TID7 509 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 ALS2CLQ60I27 953 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 BANK1Q8NDB2 785 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 HSD3B7Q9H2F3 369 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 HPCAL4Q9UM19 191 aa13.86□□□□□ -0.19
TRERF1-202ENST00000354325 ATXN2Q99700 1313 aaKnown RBP13.85□□□□□ -0.19
TRERF1-202ENST00000354325 PAFAH1B1P43034 410 aa13.85□□□□□ -0.19
TRERF1-202ENST00000354325 MMP14P50281 582 aa13.85□□□□□ -0.19
TRERF1-202ENST00000354325 UBE3BQ7Z3V4 1068 aa13.85□□□□□ -0.19
TRERF1-202ENST00000354325 NOSTRINQ8IVI9 506 aa13.85□□□□□ -0.19
TRERF1-202ENST00000354325 ARFGAP2Q8N6H7 521 aa13.85□□□□□ -0.19
TRERF1-202ENST00000354325 APPBP2Q92624 585 aa13.85□□□□□ -0.19
TRERF1-202ENST00000354325 FAM184BQ9ULE4 1060 aa13.85□□□□□ -0.19
TRERF1-202ENST00000354325 GUCA1BQ9UMX6 200 aa13.85□□□□□ -0.19
TRERF1-202ENST00000354325 STK36Q9NRP7 1315 aa13.85□□□□□ -0.19
TRERF1-202ENST00000354325 GOLGA6L10A6NI86 522 aa13.85□□□□□ -0.19
TRERF1-202ENST00000354325 TDO2P48775 406 aa13.85□□□□□ -0.19
TRERF1-202ENST00000354325 SKIDA1Q1XH10 827 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms