RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 GRIK5Q16478 980 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7□□□□□ -1.29
CLCN3-201ENST00000347613 SGMS1Q86VZ5 419 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 LINC00116Q8NCU8 138 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 TUBE1Q9UJT0 475 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 PRDM4Q9UKN5 801 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 NIP7Q9Y221 180 aaKnown RBP eCLIP7□□□□□ -1.29
CLCN3-201ENST00000347613 PCDHA5Q9Y5H7 936 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 LOC102724428A0A0B4J2F2 783 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 GOLGA8AA7E2F4 631 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 ERVV-1B6SEH8 477 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 SLC3A2P08195 630 aaKnown RBP7□□□□□ -1.29
CLCN3-201ENST00000347613 CYP2D6P10635 497 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 SIK1P57059 783 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 NLRP12P59046 1061 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 FUT2Q10981 343 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 SEC23AQ15436 765 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 AKNAD1Q5T1N1 836 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 RESP18Q5W5W9 173 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 BICDL1Q6ZP65 573 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 TMC6Q7Z403 805 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 TRMT44Q8IYL2 757 aaKnown RBP7□□□□□ -1.29
CLCN3-201ENST00000347613 ZFP91Q96JP5 570 aaPredicted RBP7□□□□□ -1.29
CLCN3-201ENST00000347613 RIOK1Q9BRS2 568 aaKnown RBP7□□□□□ -1.29
CLCN3-201ENST00000347613 TEX13AQ9BXU3 409 aaPredicted RBP7□□□□□ -1.29
CLCN3-201ENST00000347613 FANCLQ9NW38 375 aa7□□□□□ -1.29
CLCN3-201ENST00000347613 COL14A1Q05707 1796 aaKnown RBP6.99□□□□□ -1.29
CLCN3-201ENST00000347613 GOLGA6L19H0YKK7 550 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 TPD52L1Q16890 204 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-201ENST00000347613 NFXL1Q6ZNB6 911 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 CCAR2Q8N163 923 aaKnown RBP6.99□□□□□ -1.29
CLCN3-201ENST00000347613 ANO10Q9NW15 660 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 BCCIPQ9P287 314 aaKnown RBP eCLIP6.99□□□□□ -1.29
CLCN3-201ENST00000347613 FBXO2Q9UK22 296 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-201ENST00000347613 RREB1Q92766 1687 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 BECN2A8MW95 431 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 MINDY4BA8MYZ0 360 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 NPHP1O15259 732 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 IARSP41252 1262 aaKnown RBP6.99□□□□□ -1.29
CLCN3-201ENST00000347613 DPYDQ12882 1025 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 TMEM139Q8IV31 216 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 PDILTQ8N807 584 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 EPSTI1Q96J88 318 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.99□□□□□ -1.29
CLCN3-201ENST00000347613 NAPBQ9H115 298 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 EPC1Q9H2F5 836 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 CCDC87Q9NVE4 849 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 ABCF2Q9UG63 623 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 ZNF215Q9UL58 517 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-201ENST00000347613 NRAPQ86VF7 1730 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 SPATA31A1Q5TZJ5 1347 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 MROH5Q6ZUA9 1318 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 FMNL1O95466 1100 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-201ENST00000347613 MMP1P03956 469 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 CD44P16070 742 aaKnown RBP6.99□□□□□ -1.29
CLCN3-201ENST00000347613 SYKP43405 635 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 ALX1Q15699 326 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 IL17AQ16552 155 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 SMYD4Q8IYR2 804 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-201ENST00000347613 CRACR2BQ8N4Y2 399 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-201ENST00000347613 KCNG4Q8TDN1 519 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 STAMQ92783 540 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 VPS54Q9P1Q0 977 aa6.99□□□□□ -1.29
CLCN3-201ENST00000347613 SRP68Q9UHB9 627 aaKnown RBP6.99□□□□□ -1.29
CLCN3-201ENST00000347613 COL5A3P25940 1745 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-201ENST00000347613 WDR19Q8NEZ3 1342 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 CTAGE5O15320 804 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 SMC2O95347 1197 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 ABL1P00519 1130 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 ZSCAN20P17040 1043 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-201ENST00000347613 FANCCQ00597 558 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 SLC35G1Q2M3R5 365 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 CEP135Q66GS9 1140 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 TBC1D9BQ66K14 1250 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 SYNE3Q6ZMZ3 975 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 BRAPQ7Z569 592 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 DIS3L2Q8IYB7 885 aaKnown RBP6.98□□□□□ -1.29
CLCN3-201ENST00000347613 ENAHQ8N8S7 591 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-201ENST00000347613 NUP133Q8WUM0 1156 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 FAM84BQ96KN1 310 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-201ENST00000347613 GPR101Q96P66 508 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-201ENST00000347613 MPHOSPH8Q99549 860 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 UTP14AQ9BVJ6 771 aaKnown RBP6.98□□□□□ -1.29
CLCN3-201ENST00000347613 TMX1Q9H3N1 280 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 TOMM22Q9NS69 142 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 TFCP2L1Q9NZI6 479 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 SERTAD1Q9UHV2 236 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 FAM237AA0A1B0GTK4 181 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 PPARAQ07869 468 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 ATL3Q6DD88 541 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 STAG1Q8WVM7 1258 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 PPP1R13BQ96KQ4 1090 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 CCDC94Q9BW85 323 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-201ENST00000347613 OSBPL5Q9H0X9 879 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-201ENST00000347613 CABP5Q9NP86 173 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 ST7Q9NRC1 585 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 SAMSN1Q9NSI8 373 aaKnown RBP6.98□□□□□ -1.29
CLCN3-201ENST00000347613 SLC12A7Q9Y666 1083 aa6.98□□□□□ -1.29
CLCN3-201ENST00000347613 GOLGA6L6A8MZA4 724 aa6.97□□□□□ -1.29
CLCN3-201ENST00000347613 POLR2DO15514 142 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms