RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 MAPK8IP1Q9UQF2 711 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 DCAF8L1A6NGE4 600 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 TMCO5BA8MYB1 307 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 INPP5BP32019 993 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 ZSCAN29Q8IWY8 852 aaPredicted RBP12.28□□□□□ -0.44
RPL28-201ENST00000344063 CCDC114Q96M63 670 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 PSMB7Q99436 277 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 RTEL1Q9NZ71 1219 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 ZMYM1Q5SVZ6 1142 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 CCDC122Q5T0U0 273 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 FBXO18Q8NFZ0 1043 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 LPIN2Q92539 896 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 NAPGQ99747 312 aaPredicted RBP12.28□□□□□ -0.44
RPL28-201ENST00000344063 ZKSCAN3Q9BRR0 538 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 LUC7L2Q9Y383 392 aaKnown RBP12.28□□□□□ -0.44
RPL28-201ENST00000344063 PTPRMP28827 1452 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 SASH1O94885 1247 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 TCIRG1Q13488 830 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 TRIM14Q14142 442 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 ZNF827Q17R98 1081 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 DPCR1Q3MIW9 517 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 NSUN7Q8NE18 718 aaKnown RBP12.27□□□□□ -0.44
RPL28-201ENST00000344063 PHKBQ93100 1093 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 PPP2R2CQ9Y2T4 447 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 SH3TC1Q8TE82 1336 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 EFCAB8A8MWE9 144 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 TACC1O75410 805 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 ADAMTS2O95450 1211 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 UBXN1Q04323 297 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 POSTNQ15063 836 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 TTC14Q96N46 770 aa12.27□□□□□ -0.44
RPL28-201ENST00000344063 NCOA3Q9Y6Q9 1424 aa12.27□□□□□ -0.45
RPL28-201ENST00000344063 BICDL2A1A5D9 508 aa12.27□□□□□ -0.45
RPL28-201ENST00000344063 GOLGA6CA6NDK9 693 aa12.27□□□□□ -0.45
RPL28-201ENST00000344063 ERVV-2B6SEH9 535 aa12.27□□□□□ -0.45
RPL28-201ENST00000344063 GOLGA6DP0CG33 693 aa12.27□□□□□ -0.45
RPL28-201ENST00000344063 TSPY3P0CV98 308 aa12.27□□□□□ -0.45
RPL28-201ENST00000344063 TSPY8P0CW00 308 aa12.27□□□□□ -0.45
RPL28-201ENST00000344063 ASIC1P78348 528 aa12.27□□□□□ -0.45
RPL28-201ENST00000344063 KIF5AQ12840 1032 aa12.27□□□□□ -0.45
RPL28-201ENST00000344063 GOLGA6AQ9NYA3 693 aa12.27□□□□□ -0.45
RPL28-201ENST00000344063 VAT1LQ9HCJ6 419 aa12.27□□□□□ -0.45
RPL28-201ENST00000344063 PPP1R1BQ9UD71 204 aaPredicted RBP12.27□□□□□ -0.45
RPL28-201ENST00000344063 TTF2Q9UNY4 1162 aaKnown RBP12.27□□□□□ -0.45
RPL28-201ENST00000344063 MPHOSPH10O00566 681 aaKnown RBP12.26□□□□□ -0.45
RPL28-201ENST00000344063 OPA1O60313 960 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 NOP2P46087 812 aaKnown RBP12.26□□□□□ -0.45
RPL28-201ENST00000344063 NDUFA8P51970 172 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 PRPF4BQ13523 1007 aaKnown RBP12.26□□□□□ -0.45
RPL28-201ENST00000344063 WWC2Q6AWC2 1192 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 DTHD1Q6ZMT9 781 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 SLF1Q9BQI6 1058 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 ARMT1Q9H993 441 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 ZNF532Q9HCE3 1301 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 GOLGA6L10A0A0M3HER8 536 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 VWA3AA6NCI4 1184 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 HPDP32754 393 aaPredicted RBP12.26□□□□□ -0.45
RPL28-201ENST00000344063 ATP6V1AP38606 617 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 SLC4A8Q2Y0W8 1093 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 HEATR3Q7Z4Q2 680 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 STAMQ92783 540 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 NLRP3Q96P20 1036 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 FANCLQ9NW38 375 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 NEURL4Q96JN8 1562 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 FGAP02671 866 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 DDIT3P35638 169 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 RBM5P52756 815 aaKnown RBP eCLIP12.26□□□□□ -0.45
RPL28-201ENST00000344063 NAA25Q14CX7 972 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 CCDC121Q6ZUS5 278 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 GOLGA5Q8TBA6 731 aa12.26□□□□□ -0.45
RPL28-201ENST00000344063 NEXMIFQ5QGS0 1516 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 SYNRGQ9UMZ2 1314 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 PSDA5PKW4 1024 aaPredicted RBP12.25□□□□□ -0.45
RPL28-201ENST00000344063 MCM7P33993 719 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 RNASE9P60153 205 aaKnown RBP12.25□□□□□ -0.45
RPL28-201ENST00000344063 RESTQ13127 1097 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 LONRF2Q1L5Z9 754 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 TTC19Q6DKK2 380 aaPredicted RBP12.25□□□□□ -0.45
RPL28-201ENST00000344063 CRACR2BQ8N4Y2 399 aaPredicted RBP12.25□□□□□ -0.45
RPL28-201ENST00000344063 NGLY1Q96IV0 654 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 CCDC42Q96M95 316 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 FAN1Q9Y2M0 1017 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 PPP1R2P41236 205 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 RAD51AP2Q09MP3 1159 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 ZNF174Q15697 407 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 PARP10Q53GL7 1025 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 SPECC1LQ69YQ0 1117 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 CAMSAP1Q5T5Y3 1602 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 ANKARQ7Z5J8 1434 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 ZMYM6O95789 1325 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 MYO1CO00159 1063 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 AKNAD1Q5T1N1 836 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 NBPF5PQ86XG9 351 aaPredicted RBP12.25□□□□□ -0.45
RPL28-201ENST00000344063 FERMT2Q96AC1 680 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 PLIN2Q99541 437 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 MYL10Q9BUA6 226 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 C6orf50Q9HD87 102 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 CIAO1O76071 339 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 NAPAP54920 295 aa12.25□□□□□ -0.45
RPL28-201ENST00000344063 RPGRQ92834 1020 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms