RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 CAP1Q01518 475 aa20.61■□□□□ 0.89
CD55-202ENST00000343420 MAP3K12Q12852 859 aa20.61■□□□□ 0.89
CD55-202ENST00000343420 MAPKAPK5Q8IW41 473 aa20.61■□□□□ 0.89
CD55-202ENST00000343420 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.61■□□□□ 0.89
CD55-202ENST00000343420 HERC5Q9UII4 1024 aaKnown RBP20.61■□□□□ 0.89
CD55-202ENST00000343420 PTPN22Q9Y2R2 807 aa20.61■□□□□ 0.89
CD55-202ENST00000343420 FLT1P17948 1338 aa20.6■□□□□ 0.89
CD55-202ENST00000343420 A0A0G2JLL6 359 aaPredicted RBP20.6■□□□□ 0.89
CD55-202ENST00000343420 FAM196BA6NMK8 535 aa20.6■□□□□ 0.89
CD55-202ENST00000343420 DYNLL1P63167 89 aaKnown RBP20.6■□□□□ 0.89
CD55-202ENST00000343420 TTF1Q15361 905 aaPredicted RBP20.6■□□□□ 0.89
CD55-202ENST00000343420 FASTKD5Q7L8L6 764 aaKnown RBP20.6■□□□□ 0.89
CD55-202ENST00000343420 PRRT2Q7Z6L0 340 aaPredicted RBP20.6■□□□□ 0.89
CD55-202ENST00000343420 CERS3Q8IU89 383 aa20.6■□□□□ 0.89
CD55-202ENST00000343420 MAGEB6Q8N7X4 407 aa20.6■□□□□ 0.89
CD55-202ENST00000343420 C17orf99Q6UX52 265 aa20.59■□□□□ 0.89
CD55-202ENST00000343420 CAP2P40123 477 aa20.58■□□□□ 0.89
CD55-202ENST00000343420 LACTBP83111 547 aaPredicted RBP20.58■□□□□ 0.89
CD55-202ENST00000343420 KIF22Q14807 665 aa20.58■□□□□ 0.89
CD55-202ENST00000343420 GPAT2Q6NUI2 795 aa20.58■□□□□ 0.89
CD55-202ENST00000343420 MIGA1Q8NAN2 632 aa20.58■□□□□ 0.89
CD55-202ENST00000343420 PARK7Q99497 189 aaKnown RBP20.58■□□□□ 0.89
CD55-202ENST00000343420 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.58■□□□□ 0.89
CD55-202ENST00000343420 KIAA0100Q14667 2235 aaKnown RBP20.58■□□□□ 0.88
CD55-202ENST00000343420 ADGRA2Q96PE1 1338 aa20.57■□□□□ 0.88
CD55-202ENST00000343420 PDE4DIPQ5VU43 2346 aa20.57■□□□□ 0.88
CD55-202ENST00000343420 GADL1Q6ZQY3 521 aa20.57■□□□□ 0.88
CD55-202ENST00000343420 METTL16Q86W50 562 aaKnown RBP20.57■□□□□ 0.88
CD55-202ENST00000343420 FOXP4Q8IVH2 680 aaPredicted RBP20.57■□□□□ 0.88
CD55-202ENST00000343420 TBC1D2Q9BYX2 928 aa20.57■□□□□ 0.88
CD55-202ENST00000343420 BCL11AQ9H165 835 aa20.57■□□□□ 0.88
CD55-202ENST00000343420 CPA4Q9UI42 421 aa20.57■□□□□ 0.88
CD55-202ENST00000343420 ZSWIM8A7E2V4 1837 aa20.57■□□□□ 0.88
CD55-202ENST00000343420 TRIM75PA6NK02 468 aa20.56■□□□□ 0.88
CD55-202ENST00000343420 RRP1BQ14684 758 aaKnown RBP20.56■□□□□ 0.88
CD55-202ENST00000343420 CCDC84Q86UT8 332 aaPredicted RBP20.56■□□□□ 0.88
CD55-202ENST00000343420 PALD1Q9ULE6 856 aa20.56■□□□□ 0.88
CD55-202ENST00000343420 SLC45A1Q9Y2W3 748 aa20.56■□□□□ 0.88
CD55-202ENST00000343420 GNRH1P01148 92 aa20.55■□□□□ 0.88
CD55-202ENST00000343420 HLA-DOAP06340 250 aa20.55■□□□□ 0.88
CD55-202ENST00000343420 DNAJC2Q99543 621 aaKnown RBP20.55■□□□□ 0.88
CD55-202ENST00000343420 TRIM34Q9BYJ4 488 aa20.55■□□□□ 0.88
CD55-202ENST00000343420 LRRCC1Q9C099 1032 aa20.55■□□□□ 0.88
CD55-202ENST00000343420 ARHGAP39Q9C0H5 1083 aa20.55■□□□□ 0.88
CD55-202ENST00000343420 SAP30BPQ9UHR5 308 aaKnown RBP20.55■□□□□ 0.88
CD55-202ENST00000343420 USP17L5A8MUK1 530 aa20.54■□□□□ 0.88
CD55-202ENST00000343420 GOLIM4O00461 696 aa20.54■□□□□ 0.88
CD55-202ENST00000343420 CYP2C8P10632 490 aa20.54■□□□□ 0.88
CD55-202ENST00000343420 USP5P45974 858 aa20.54■□□□□ 0.88
CD55-202ENST00000343420 SLC9C2Q5TAH2 1124 aa20.54■□□□□ 0.88
CD55-202ENST00000343420 CRACR2BQ8N4Y2 399 aaPredicted RBP20.54■□□□□ 0.88
CD55-202ENST00000343420 ZNF280CQ8ND82 737 aa20.54■□□□□ 0.88
CD55-202ENST00000343420 DNAJC18Q9H819 358 aa20.54■□□□□ 0.88
CD55-202ENST00000343420 LOC285556D6RIA3 1793 aa20.54■□□□□ 0.88
CD55-202ENST00000343420 MGAMO43451 1857 aa20.54■□□□□ 0.88
CD55-202ENST00000343420 HTTP42858 3142 aa20.53■□□□□ 0.88
CD55-202ENST00000343420 PDE6AP16499 860 aa20.53■□□□□ 0.88
CD55-202ENST00000343420 ATP5JP18859 108 aa20.53■□□□□ 0.88
CD55-202ENST00000343420 SPP2Q13103 211 aa20.53■□□□□ 0.88
CD55-202ENST00000343420 PROCA1Q8NCQ7 364 aaPredicted RBP20.53■□□□□ 0.88
CD55-202ENST00000343420 ARMC5Q96C12 935 aa20.53■□□□□ 0.88
CD55-202ENST00000343420 RIOK1Q9BRS2 568 aaKnown RBP20.53■□□□□ 0.88
CD55-202ENST00000343420 AS3MTQ9HBK9 375 aa20.53■□□□□ 0.88
CD55-202ENST00000343420 GINM1Q9NU53 330 aa20.53■□□□□ 0.88
CD55-202ENST00000343420 AGTPBP1Q9UPW5 1226 aa20.53■□□□□ 0.88
CD55-202ENST00000343420 MYH7P12883 1935 aa20.53■□□□□ 0.88
CD55-202ENST00000343420 MAGEB6P1A0A0J9YX57 407 aa20.52■□□□□ 0.88
CD55-202ENST00000343420 ASNSP08243 561 aa20.52■□□□□ 0.88
CD55-202ENST00000343420 BCRP11274 1271 aa20.52■□□□□ 0.88
CD55-202ENST00000343420 PRMT2P55345 433 aa20.52■□□□□ 0.88
CD55-202ENST00000343420 BOLA2Q9H3K6 86 aa20.52■□□□□ 0.88
CD55-202ENST00000343420 PTCH2Q9Y6C5 1203 aa20.52■□□□□ 0.88
CD55-202ENST00000343420 EDC3Q96F86 508 aaKnown RBP20.51■□□□□ 0.87
CD55-202ENST00000343420 DCTPP1Q9H773 170 aa20.51■□□□□ 0.87
CD55-202ENST00000343420 PAG1Q9NWQ8 432 aa20.51■□□□□ 0.87
CD55-202ENST00000343420 NAV1Q8NEY1 1877 aa20.51■□□□□ 0.87
CD55-202ENST00000343420 RBBP6Q7Z6E9 1792 aaKnown RBP20.51■□□□□ 0.87
CD55-202ENST00000343420 CENPFP49454 3210 aa20.51■□□□□ 0.87
CD55-202ENST00000343420 ZNF532Q9HCE3 1301 aa20.51■□□□□ 0.87
CD55-202ENST00000343420 TCRBV5S4A2TA0A5A2 114 aa20.5■□□□□ 0.87
CD55-202ENST00000343420 SMARCA5O60264 1052 aaPredicted RBP20.5■□□□□ 0.87
CD55-202ENST00000343420 CTGFP29279 349 aa20.5■□□□□ 0.87
CD55-202ENST00000343420 PSMC4P43686 418 aa20.5■□□□□ 0.87
CD55-202ENST00000343420 SLC4A8Q2Y0W8 1093 aa20.5■□□□□ 0.87
CD55-202ENST00000343420 TREML2Q5T2D2 321 aa20.5■□□□□ 0.87
CD55-202ENST00000343420 TTC6Q86TZ1 520 aa20.5■□□□□ 0.87
CD55-202ENST00000343420 HAUS7Q99871 368 aa20.5■□□□□ 0.87
CD55-202ENST00000343420 WDR18Q9BV38 432 aa20.5■□□□□ 0.87
CD55-202ENST00000343420 HOXD10P28358 340 aa20.49■□□□□ 0.87
CD55-202ENST00000343420 HMGCS2P54868 508 aa20.49■□□□□ 0.87
CD55-202ENST00000343420 SLC9C1Q4G0N8 1177 aa20.49■□□□□ 0.87
CD55-202ENST00000343420 SH3D19Q5HYK7 790 aa20.49■□□□□ 0.87
CD55-202ENST00000343420 NBPF11Q86T75 865 aa20.49■□□□□ 0.87
CD55-202ENST00000343420 TRIM47Q96LD4 638 aa20.49■□□□□ 0.87
CD55-202ENST00000343420 CRNKL1Q9BZJ0 848 aaKnown RBP20.49■□□□□ 0.87
CD55-202ENST00000343420 EHD4Q9H223 541 aa20.49■□□□□ 0.87
CD55-202ENST00000343420 SERPINB13Q9UIV8 391 aa20.49■□□□□ 0.87
CD55-202ENST00000343420 PNMA3Q9UL41 463 aa20.49■□□□□ 0.87
CD55-202ENST00000343420 DDX60LQ5H9U9 1706 aaKnown RBP20.49■□□□□ 0.87
CD55-202ENST00000343420 ECM2O94769 699 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms