RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 EXOC1Q9NV70 894 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 A0A1W2PQ27 194 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 A0A1W2PQ64 194 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 A0A1W2PQD8 194 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 ZSCAN20P17040 1043 aaPredicted RBP14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 FAM47AQ5JRC9 791 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 ZSCAN29Q8IWY8 852 aaPredicted RBP14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 TEX13AQ9BXU3 409 aaPredicted RBP14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 LUC7LQ9NQ29 371 aaKnown RBP14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 ANKRD65E5RJM6 399 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 ZMYND10O75800 440 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 PDE4BQ07343 736 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 KIF5AQ12840 1032 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 CCDC152Q4G0S7 254 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 CCDC113Q9H0I3 377 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 DDX41Q9UJV9 622 aaKnown RBP14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 ENC1O14682 589 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 FOXN1O15353 648 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 KIF5BP33176 963 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 SPAG1Q07617 926 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 TCIRG1Q13488 830 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 IQCB1Q15051 598 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 HDXQ7Z353 690 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 MAATS1Q7Z4T9 603 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 HECW2Q9P2P5 1572 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 SALL3Q9BXA9 1300 aa14.05□□□□□ -0.16
SNRNP48-201ENST00000342415 CYLC1P35663 651 aaPredicted RBP14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 ATP6V1AP38606 617 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 BCAMP50895 628 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 TBC1D8BQ0IIM8 1120 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 PRPF4BQ13523 1007 aaKnown RBP14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 ZSCAN26Q16670 478 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 AKNAD1Q5T1N1 836 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 IFNL3Q8IZI9 196 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 IFT81Q8WYA0 676 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 CDC5LQ99459 802 aaKnown RBP14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 WWC3Q9ULE0 1092 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 CAMSAP1Q5T5Y3 1602 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 FMR1NBQ8N0W7 255 aaPredicted RBP14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 MICALL1Q8N3F8 863 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 NAPGQ99747 312 aaPredicted RBP14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 POLR3EQ9NVU0 708 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 TCEAL9Q9UHQ7 104 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 KRT86O43790 486 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 SPATA5Q8NB90 893 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 PSDA5PKW4 1024 aaPredicted RBP14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 SOWAHDA6NJG2 315 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 CASP14P31944 242 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 SF3A3Q12874 501 aaKnown RBP eCLIP14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 LETM2Q2VYF4 491 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 DHX40Q8IX18 779 aaKnown RBP14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 ZNF654Q8IZM8 581 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 DPF2Q92785 391 aa14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 IRX2Q9BZI1 471 aaPredicted RBP14.04□□□□□ -0.16
SNRNP48-201ENST00000342415 CDC25BP30305 580 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 CDR1P51861 262 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 RBM5P52756 815 aaKnown RBP eCLIP14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 TERF2Q15554 542 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 ANKRD18AQ8IVF6 992 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 PDE11AQ9HCR9 933 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 ST3GAL1Q11201 340 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 SCARF1Q14162 830 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 TTC38Q5R3I4 469 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 DTHD1Q6ZMT9 781 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 CALML4Q96GE6 196 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 CSRNP2Q9H175 543 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 ASAP1Q9ULH1 1129 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 ZPR1O75312 459 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 TSPY3P0CV98 308 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 TSPY8P0CW00 308 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 UTP14CQ5TAP6 766 aaKnown RBP14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 WWC2Q6AWC2 1192 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 ARMCX5Q6P1M9 558 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 TSPOAP1O95153 1857 aa14.03□□□□□ -0.16
SNRNP48-201ENST00000342415 PNMA6AP0CW24 399 aaPredicted RBP14.02□□□□□ -0.16
SNRNP48-201ENST00000342415 PUM3Q15397 648 aaKnown RBP14.02□□□□□ -0.16
SNRNP48-201ENST00000342415 CRNKL1Q9BZJ0 848 aaKnown RBP14.02□□□□□ -0.16
SNRNP48-201ENST00000342415 GOPCQ9HD26 462 aa14.02□□□□□ -0.16
SNRNP48-201ENST00000342415 RMND1Q9NWS8 449 aa14.02□□□□□ -0.16
SNRNP48-201ENST00000342415 ZSWIM5Q9P217 1185 aa14.02□□□□□ -0.16
SNRNP48-201ENST00000342415 COL3A1P02461 1466 aaPredicted RBP14.02□□□□□ -0.16
SNRNP48-201ENST00000342415 EFCAB8A8MWE9 144 aa14.02□□□□□ -0.17
SNRNP48-201ENST00000342415 NAPAP54920 295 aa14.02□□□□□ -0.17
SNRNP48-201ENST00000342415 AATFQ9NY61 560 aaKnown RBP eCLIP14.02□□□□□ -0.17
SNRNP48-201ENST00000342415 PCDHB6Q9Y5E3 794 aa14.02□□□□□ -0.17
SNRNP48-201ENST00000342415 KIF28PB7ZC32 967 aa14.02□□□□□ -0.17
SNRNP48-201ENST00000342415 ZMYM6O95789 1325 aa14.02□□□□□ -0.17
SNRNP48-201ENST00000342415 MNAT1P51948 309 aa14.02□□□□□ -0.17
SNRNP48-201ENST00000342415 GPR161Q8N6U8 529 aaKnown RBP14.02□□□□□ -0.17
SNRNP48-201ENST00000342415 FANCBQ8NB91 859 aa14.02□□□□□ -0.17
SNRNP48-201ENST00000342415 EPSTI1Q96J88 318 aa14.02□□□□□ -0.17
SNRNP48-201ENST00000342415 TFCP2L1Q9NZI6 479 aa14.02□□□□□ -0.17
SNRNP48-201ENST00000342415 F8W031 263 aaPredicted RBP14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 ACRBPQ8NEB7 543 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 ALS2CR12Q96Q35 445 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 FUCA2Q9BTY2 467 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 CD163L1Q9NR16 1453 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 ARHGAP31Q2M1Z3 1444 aa14.01□□□□□ -0.17
SNRNP48-201ENST00000342415 CYP27B1O15528 508 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms