RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 GOLGA6L7A0A1B0GV03 622 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 M0R2C6 588 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 IMPDH2P12268 514 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 AMOTQ4VCS5 1084 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 TBC1D2BQ9UPU7 963 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 SALL3Q9BXA9 1300 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 SSH2Q76I76 1423 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 DEPDC5O75140 1603 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 FAM83GA6ND36 823 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 KIF5CO60282 957 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 DIAPH2O60879 1101 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 ANP32DO95626 131 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 CTCFP49711 727 aaPredicted RBP10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 NDUFA8P51970 172 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 FILIP1LQ4L180 1135 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 CCDC121Q6ZUS5 278 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 SND1Q7KZF4 910 aaKnown RBP eCLIP10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 TMTC2Q8N394 836 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 TC2NQ8N9U0 490 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 RNPC3Q96LT9 517 aaKnown RBP10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 OSBPL7Q9BZF2 842 aa10.89□□□□□ -0.67
PTCHD4-201ENST00000339488 IQGAP3Q86VI3 1631 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 CTAGE9A4FU28 777 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 SPDYE5A6NIY4 337 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 ATP6V1G2O95670 118 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 FESP07332 822 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 TUBP50607 506 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 CCDC178Q5BJE1 867 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 RAD9BQ6WBX8 426 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 ENGASEQ8NFI3 743 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 TRIM58Q8NG06 486 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 TCP11Q8WWU5 503 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 ARHGEF1Q92888 912 aaKnown RBP10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 RBM17Q96I25 401 aaKnown RBP10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 SH3GL2Q99962 352 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 HOMER3Q9NSC5 361 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 PNMA6EA0A0J9YXQ4 647 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 AHCYL1O43865 530 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 SETSIPP0DME0 302 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 PRKAR2BP31323 418 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 LSP1P33241 339 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 ABL2P42684 1182 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 GGT6Q6P531 493 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 ACSBG1Q96GR2 724 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 PHACTR3Q96KR7 559 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 UBE2OQ9C0C9 1292 aaKnown RBP10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 VIPAS39Q9H9C1 493 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 SH2B1Q9NRF2 756 aaPredicted RBP10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 LNPEPQ9UIQ6 1025 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 HOOK1Q9UJC3 728 aaKnown RBP10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 C15orf41Q9Y2V0 281 aa10.88□□□□□ -0.67
PTCHD4-201ENST00000339488 SLC8A1P32418 973 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 HIBCHQ6NVY1 386 aaPredicted RBP10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 ARMC9Q7Z3E5 817 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 CCDC148Q8NFR7 591 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 HOOK2Q96ED9 719 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 RBM41Q96IZ5 413 aaKnown RBP10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 NLRP3Q96P20 1036 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 TMX4Q9H1E5 349 aaPredicted RBP10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 PPANQ9NQ55 473 aaKnown RBP10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 DNAAF2Q9NVR5 837 aaKnown RBP10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 E7EVH7 732 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 CYP27B1O15528 508 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 FUT4P22083 530 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 LRRC23Q53EV4 343 aaPredicted RBP10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 TRIM68Q6AZZ1 485 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 PNMA8AQ86V59 439 aaPredicted RBP10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 FCHSD1Q86WN1 690 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.87□□□□□ -0.671e-7■■■□□ 17
PTCHD4-201ENST00000339488 ATL2Q8NHH9 583 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 CCT8L2Q96SF2 557 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 TRIM10Q9UDY6 481 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 TFR2Q9UP52 801 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 GOLGA6L9A6NEM1 432 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 KRT14P02533 472 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 CLTAP09496 248 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 CCDC175P0C221 793 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 ATP4AP20648 1035 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 PDCP20941 246 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 GALNT17Q6IS24 598 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 MICALCLQ6ZW33 695 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 MFN1Q8IWA4 741 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 KCNV2Q8TDN2 545 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 MMS19Q96T76 1030 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 GORASP1Q9BQQ3 440 aa10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 MMTAG2Q9BU76 263 aaKnown RBP10.87□□□□□ -0.67
PTCHD4-201ENST00000339488 ZNF189O75820 626 aaPredicted RBP10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 MYL6BP14649 208 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 PDIA5Q14554 519 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 EZH2Q15910 746 aaKnown RBP10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 DBN1Q16643 649 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 MYCBPAPQ8TBZ2 947 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 SEC62Q99442 399 aaKnown RBP10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 SENP3Q9H4L4 574 aaPredicted RBP10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 ERICH2A1L162 156 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 IKBKBO14920 756 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 USP14P54578 494 aa10.86□□□□□ -0.67
PTCHD4-201ENST00000339488 PPP1R7Q15435 360 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms