RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 MAP3K12Q12852 859 aa18.91■□□□□ 0.62
LITAF-201ENST00000339430 ANO1Q5XXA6 986 aa18.91■□□□□ 0.62
LITAF-201ENST00000339430 AOPEPQ8N6M6 819 aa18.91■□□□□ 0.62
LITAF-201ENST00000339430 UPF1Q92900 1129 aaKnown RBP eCLIP18.91■□□□□ 0.621e-6■□□□□ 10.7
LITAF-201ENST00000339430 A0A1W2PQ27 194 aa18.9■□□□□ 0.62
LITAF-201ENST00000339430 A0A1W2PQ64 194 aa18.9■□□□□ 0.62
LITAF-201ENST00000339430 A0A1W2PQD8 194 aa18.9■□□□□ 0.62
LITAF-201ENST00000339430 UBE2Q2LH0YL09 131 aa18.9■□□□□ 0.62
LITAF-201ENST00000339430 TMEM67Q5HYA8 995 aa18.9■□□□□ 0.62
LITAF-201ENST00000339430 IGDCC4Q8TDY8 1250 aa18.9■□□□□ 0.62
LITAF-201ENST00000339430 PRIMPOLQ96LW4 560 aa18.9■□□□□ 0.62
LITAF-201ENST00000339430 TACC3Q9Y6A5 838 aa18.9■□□□□ 0.62
LITAF-201ENST00000339430 ZNF804BA4D1E1 1349 aa18.9■□□□□ 0.62
LITAF-201ENST00000339430 PATL2C9JE40 543 aaKnown RBP18.9■□□□□ 0.62
LITAF-201ENST00000339430 ZBTB43O43298 467 aa18.9■□□□□ 0.62
LITAF-201ENST00000339430 NPR1P16066 1061 aa18.9■□□□□ 0.62
LITAF-201ENST00000339430 LY9Q9HBG7 655 aa18.9■□□□□ 0.62
LITAF-201ENST00000339430 IQSEC3Q9UPP2 1182 aaPredicted RBP18.9■□□□□ 0.62
LITAF-201ENST00000339430 CAVIN4Q5BKX8 364 aa18.89■□□□□ 0.61
LITAF-201ENST00000339430 RRP12Q5JTH9 1297 aaKnown RBP18.89■□□□□ 0.61
LITAF-201ENST00000339430 KRT40Q6A162 431 aa18.89■□□□□ 0.61
LITAF-201ENST00000339430 CACTINQ8WUQ7 758 aaKnown RBP18.89■□□□□ 0.61
LITAF-201ENST00000339430 DOCK2Q92608 1830 aa18.89■□□□□ 0.61
LITAF-201ENST00000339430 PDCL3Q9H2J4 239 aa18.89■□□□□ 0.61
LITAF-201ENST00000339430 ZSWIM5Q9P217 1185 aa18.89■□□□□ 0.61
LITAF-201ENST00000339430 GOLGA8AA7E2F4 631 aa18.89■□□□□ 0.61
LITAF-201ENST00000339430 GNL2Q13823 731 aaKnown RBP18.89■□□□□ 0.61
LITAF-201ENST00000339430 VPS37DQ86XT2 251 aa18.89■□□□□ 0.61
LITAF-201ENST00000339430 CEP57L1Q8IYX8 460 aa18.89■□□□□ 0.61
LITAF-201ENST00000339430 SLC16A10Q8TF71 515 aa18.89■□□□□ 0.61
LITAF-201ENST00000339430 TMEM87BQ96K49 555 aa18.89■□□□□ 0.61
LITAF-201ENST00000339430 FAM84BQ96KN1 310 aaPredicted RBP18.89■□□□□ 0.61
LITAF-201ENST00000339430 ZKSCAN3Q9BRR0 538 aa18.89■□□□□ 0.61
LITAF-201ENST00000339430 TOMM22Q9NS69 142 aa18.89■□□□□ 0.61
LITAF-201ENST00000339430 XDHP47989 1333 aa18.88■□□□□ 0.61
LITAF-201ENST00000339430 BIN1O00499 593 aa18.88■□□□□ 0.61
LITAF-201ENST00000339430 IFIT3O14879 490 aaKnown RBP18.88■□□□□ 0.61
LITAF-201ENST00000339430 WDHD1O75717 1129 aaPredicted RBP18.88■□□□□ 0.61
LITAF-201ENST00000339430 GPSM2P81274 684 aa18.88■□□□□ 0.61
LITAF-201ENST00000339430 ARID5BQ14865 1188 aa18.88■□□□□ 0.61
LITAF-201ENST00000339430 LCORLQ8N3X6 602 aa18.88■□□□□ 0.61
LITAF-201ENST00000339430 MIGA1Q8NAN2 632 aa18.88■□□□□ 0.61
LITAF-201ENST00000339430 COL11A2P13942 1736 aaPredicted RBP18.88■□□□□ 0.61
LITAF-201ENST00000339430 MROH7-TTC4A0A0A0MT08 1334 aa18.88■□□□□ 0.61
LITAF-201ENST00000339430 PPEF1O14829 653 aaPredicted RBP18.88■□□□□ 0.61
LITAF-201ENST00000339430 RANBP6O60518 1105 aaKnown RBP18.88■□□□□ 0.61
LITAF-201ENST00000339430 CDKL5O76039 1030 aa18.88■□□□□ 0.61
LITAF-201ENST00000339430 CPLX2Q6PUV4 134 aaKnown RBP18.88■□□□□ 0.61
LITAF-201ENST00000339430 SARM1Q6SZW1 724 aa18.88■□□□□ 0.61
LITAF-201ENST00000339430 C2CD5Q86YS7 1000 aa18.88■□□□□ 0.61
LITAF-201ENST00000339430 MASTLQ96GX5 879 aa18.88■□□□□ 0.61
LITAF-201ENST00000339430 GSG1L2A8MUP6 293 aa18.87■□□□□ 0.61
LITAF-201ENST00000339430 ZNF202O95125 648 aa18.87■□□□□ 0.61
LITAF-201ENST00000339430 PFKFB1P16118 471 aa18.87■□□□□ 0.61
LITAF-201ENST00000339430 IARSP41252 1262 aaKnown RBP18.87■□□□□ 0.61
LITAF-201ENST00000339430 DPCR1Q3MIW9 517 aa18.87■□□□□ 0.61
LITAF-201ENST00000339430 AXDND1Q5T1B0 1012 aaPredicted RBP18.87■□□□□ 0.61
LITAF-201ENST00000339430 TXNRD3Q86VQ6 643 aa18.87■□□□□ 0.61
LITAF-201ENST00000339430 ZNF622Q969S3 477 aaKnown RBP eCLIP18.87■□□□□ 0.61
LITAF-201ENST00000339430 ARID3AQ99856 593 aa18.87■□□□□ 0.61
LITAF-201ENST00000339430 FAM217BQ9NTX9 383 aaPredicted RBP18.87■□□□□ 0.61
LITAF-201ENST00000339430 KIAA1468Q9P260 1216 aa18.87■□□□□ 0.61
LITAF-201ENST00000339430 H0YIN7 160 aa18.86■□□□□ 0.61
LITAF-201ENST00000339430 CDC25BP30305 580 aa18.86■□□□□ 0.61
LITAF-201ENST00000339430 TDO2P48775 406 aa18.86■□□□□ 0.61
LITAF-201ENST00000339430 ZRSR1Q15695 479 aaKnown RBP18.86■□□□□ 0.61
LITAF-201ENST00000339430 ALX1Q15699 326 aa18.86■□□□□ 0.61
LITAF-201ENST00000339430 NTRK3Q16288 839 aa18.86■□□□□ 0.61
LITAF-201ENST00000339430 SLC26A6Q9BXS9 759 aa18.86■□□□□ 0.61
LITAF-201ENST00000339430 GNL3LQ9NVN8 582 aaKnown RBP18.86■□□□□ 0.61
LITAF-201ENST00000339430 SLC4A4Q9Y6R1 1079 aa18.86■□□□□ 0.61
LITAF-201ENST00000339430 ZBTB7AO95365 584 aa18.86■□□□□ 0.61
LITAF-201ENST00000339430 ALDH1B1P30837 517 aa18.86■□□□□ 0.61
LITAF-201ENST00000339430 ISM2Q6H9L7 571 aa18.86■□□□□ 0.61
LITAF-201ENST00000339430 LEMD3Q9Y2U8 911 aa18.86■□□□□ 0.61
LITAF-201ENST00000339430 SLC12A7Q9Y666 1083 aa18.86■□□□□ 0.61
LITAF-201ENST00000339430 CCDC69A6NI79 296 aa18.85■□□□□ 0.61
LITAF-201ENST00000339430 CHRNA5P30532 468 aa18.85■□□□□ 0.61
LITAF-201ENST00000339430 FBXO33Q7Z6M2 555 aa18.85■□□□□ 0.61
LITAF-201ENST00000339430 FILIP1Q7Z7B0 1213 aa18.85■□□□□ 0.61
LITAF-201ENST00000339430 C16orf45Q96MC5 204 aaPredicted RBP18.85■□□□□ 0.61
LITAF-201ENST00000339430 GPR101Q96P66 508 aaPredicted RBP18.85■□□□□ 0.61
LITAF-201ENST00000339430 NAT10Q9H0A0 1025 aaKnown RBP18.85■□□□□ 0.61
LITAF-201ENST00000339430 SLC3A2P08195 630 aaKnown RBP18.85■□□□□ 0.61
LITAF-201ENST00000339430 R3HDM1Q15032 1099 aaKnown RBP18.85■□□□□ 0.61
LITAF-201ENST00000339430 AKNAD1Q5T1N1 836 aa18.85■□□□□ 0.61
LITAF-201ENST00000339430 MFSD6Q6ZSS7 791 aa18.85■□□□□ 0.61
LITAF-201ENST00000339430 TMC4Q7Z404 712 aa18.85■□□□□ 0.61
LITAF-201ENST00000339430 SP8Q8IXZ3 490 aa18.85■□□□□ 0.61
LITAF-201ENST00000339430 MRFAP1L1Q96HT8 127 aa18.85■□□□□ 0.61
LITAF-201ENST00000339430 LRP2BPQ9P2M1 347 aa18.85■□□□□ 0.61
LITAF-201ENST00000339430 ATP6V0A2Q9Y487 856 aa18.85■□□□□ 0.61
LITAF-201ENST00000339430 UFL1O94874 794 aa18.84■□□□□ 0.61
LITAF-201ENST00000339430 HIBADHP31937 336 aaKnown RBP18.84■□□□□ 0.61
LITAF-201ENST00000339430 SLC39A14Q15043 492 aa18.84■□□□□ 0.61
LITAF-201ENST00000339430 OLFM4Q6UX06 510 aa18.84■□□□□ 0.61
LITAF-201ENST00000339430 SGMS1Q86VZ5 419 aa18.84■□□□□ 0.61
LITAF-201ENST00000339430 CCDC82Q8N4S0 544 aa18.84■□□□□ 0.61
LITAF-201ENST00000339430 CMA1P23946 247 aa18.84■□□□□ 0.61
LITAF-201ENST00000339430 CHAF1AQ13111 956 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms