RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 DIS3L2Q8IYB7 885 aaKnown RBP12.74□□□□□ -0.37
POLR1B-202ENST00000333990 KDM4FA0A1W2PPD8 638 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 FGAP02671 866 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 GSDMDP57764 484 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 UVSSAQ2YD98 709 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 SUPT20HL1Q3ZLR7 823 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 HAUS3Q68CZ6 603 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 DHX36Q9H2U1 1008 aaKnown RBP12.74□□□□□ -0.37
POLR1B-202ENST00000333990 CPS1P31327 1500 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 CCDC172P0C7W6 258 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 KRT13P13646 458 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 PPP1R2P41236 205 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 SDR42E1Q8WUS8 393 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 CTAGE1Q96RT6 745 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 DACT1Q9NYF0 836 aa12.74□□□□□ -0.37
POLR1B-202ENST00000333990 PRKG1Q13976 671 aa12.73□□□□□ -0.37
POLR1B-202ENST00000333990 CIAPIN1Q6FI81 312 aa12.73□□□□□ -0.37
POLR1B-202ENST00000333990 RICTORQ6R327 1708 aa12.73□□□□□ -0.37
POLR1B-202ENST00000333990 MARCH10Q8NA82 808 aaPredicted RBP12.73□□□□□ -0.37
POLR1B-202ENST00000333990 TMEM87AQ8NBN3 555 aa12.73□□□□□ -0.37
POLR1B-202ENST00000333990 DHX58Q96C10 678 aa12.73□□□□□ -0.37
POLR1B-202ENST00000333990 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
POLR1B-202ENST00000333990 TCP10L2B9ZVM9 353 aa12.73□□□□□ -0.37
POLR1B-202ENST00000333990 FAM13AO94988 1023 aa12.73□□□□□ -0.37
POLR1B-202ENST00000333990 CPXCR1Q8N123 301 aa12.73□□□□□ -0.37
POLR1B-202ENST00000333990 SMCR8Q8TEV9 937 aaPredicted RBP12.73□□□□□ -0.37
POLR1B-202ENST00000333990 ZSCAN10Q96SZ4 725 aaPredicted RBP12.73□□□□□ -0.37
POLR1B-202ENST00000333990 DBNDD1Q9H9R9 158 aa12.73□□□□□ -0.37
POLR1B-202ENST00000333990 USP17L3A6NCW0 530 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 USP17L4A6NCW7 530 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 JAKMIP3Q5VZ66 844 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 USP17L1Q7RTZ2 530 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 NUP88Q99567 741 aaPredicted RBP12.72□□□□□ -0.37
POLR1B-202ENST00000333990 BRIP1Q9BX63 1249 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 MYO3BQ8WXR4 1341 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 MST1RQ04912 1400 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 USO1O60763 962 aaKnown RBP12.72□□□□□ -0.37
POLR1B-202ENST00000333990 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
POLR1B-202ENST00000333990 ADD2P35612 726 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 ICA1Q05084 483 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 TDRD12Q587J7 1177 aaKnown RBP12.72□□□□□ -0.37
POLR1B-202ENST00000333990 PNMA1Q8ND90 353 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 TCHPQ9BT92 498 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 N4BP3O15049 544 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 FAM47AQ5JRC9 791 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 NSMFQ6X4W1 530 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 PODNQ7Z5L7 613 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 SLC5A4Q9NY91 659 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 TNKSO95271 1327 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 RPAP1Q9BWH6 1393 aaPredicted RBP12.72□□□□□ -0.37
POLR1B-202ENST00000333990 ARHGAP23Q9P227 1491 aa12.72□□□□□ -0.37
POLR1B-202ENST00000333990 NKX1-1Q15270 411 aaPredicted RBP12.71□□□□□ -0.37
POLR1B-202ENST00000333990 REXO1Q8N1G1 1221 aaKnown RBP12.71□□□□□ -0.37
POLR1B-202ENST00000333990 MAP4K1Q92918 833 aa12.71□□□□□ -0.37
POLR1B-202ENST00000333990 SEC62Q99442 399 aaKnown RBP12.71□□□□□ -0.37
POLR1B-202ENST00000333990 NCOA5Q9HCD5 579 aaKnown RBP12.71□□□□□ -0.37
POLR1B-202ENST00000333990 BICDL2A1A5D9 508 aa12.71□□□□□ -0.37
POLR1B-202ENST00000333990 TBC1D9BQ66K14 1250 aa12.71□□□□□ -0.37
POLR1B-202ENST00000333990 ARID3AQ99856 593 aa12.71□□□□□ -0.37
POLR1B-202ENST00000333990 MED23Q9ULK4 1368 aa12.71□□□□□ -0.37
POLR1B-202ENST00000333990 ABCB5Q2M3G0 1257 aa12.71□□□□□ -0.38
POLR1B-202ENST00000333990 APBB1IPQ7Z5R6 666 aaPredicted RBP12.71□□□□□ -0.38
POLR1B-202ENST00000333990 BIN2Q9UBW5 565 aaPredicted RBP12.71□□□□□ -0.38
POLR1B-202ENST00000333990 SERPINB13Q9UIV8 391 aa12.71□□□□□ -0.38
POLR1B-202ENST00000333990 DDAH1O94760 285 aa12.7□□□□□ -0.38
POLR1B-202ENST00000333990 SASH1O94885 1247 aa12.7□□□□□ -0.38
POLR1B-202ENST00000333990 ANO1Q5XXA6 986 aa12.7□□□□□ -0.38
POLR1B-202ENST00000333990 IQGAP1P46940 1657 aa12.7□□□□□ -0.38
POLR1B-202ENST00000333990 GPATCH4Q5T3I0 446 aaKnown RBP12.7□□□□□ -0.38
POLR1B-202ENST00000333990 KRT40Q6A162 431 aa12.7□□□□□ -0.38
POLR1B-202ENST00000333990 PIK3AP1Q6ZUJ8 805 aa12.7□□□□□ -0.38
POLR1B-202ENST00000333990 CCDC65Q8IXS2 484 aa12.7□□□□□ -0.38
POLR1B-202ENST00000333990 CCDC112Q8NEF3 446 aa12.7□□□□□ -0.38
POLR1B-202ENST00000333990 CSRNP1Q96S65 589 aa12.7□□□□□ -0.38
POLR1B-202ENST00000333990 TLR7Q9NYK1 1049 aaKnown RBP12.7□□□□□ -0.38
POLR1B-202ENST00000333990 EN1Q05925 392 aaPredicted RBP12.7□□□□□ -0.38
POLR1B-202ENST00000333990 TTC38Q5R3I4 469 aa12.7□□□□□ -0.38
POLR1B-202ENST00000333990 FANCBQ8NB91 859 aa12.7□□□□□ -0.38
POLR1B-202ENST00000333990 IMPG2Q9BZV3 1241 aa12.7□□□□□ -0.38
POLR1B-202ENST00000333990 ELP1O95163 1332 aa12.7□□□□□ -0.38
POLR1B-202ENST00000333990 VWA3AA6NCI4 1184 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 NBPF26B4DH59 902 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 IGSF3O75054 1194 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 PTH1RQ03431 593 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 NFIXQ14938 502 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 ZNF174Q15697 407 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 NBPF10Q6P3W6 841 aaKnown RBP12.69□□□□□ -0.38
POLR1B-202ENST00000333990 SV2BQ7L1I2 683 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 NBPF15Q8N660 670 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 FAM200AQ8TCP9 573 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 MYL10Q9BUA6 226 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 ZSWIM6Q9HCJ5 1215 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 PPLO60437 1756 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 SSR1P43307 286 aaKnown RBP12.69□□□□□ -0.38
POLR1B-202ENST00000333990 GALNT17Q6IS24 598 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 GIMAP6Q6P9H5 292 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 GPHNQ9NQX3 736 aaPredicted RBP12.69□□□□□ -0.38
POLR1B-202ENST00000333990 MRPL11Q9Y3B7 192 aaKnown RBP12.69□□□□□ -0.38
POLR1B-202ENST00000333990 RAD17O75943 681 aa12.69□□□□□ -0.38
POLR1B-202ENST00000333990 CFBP00751 764 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms