RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 TEX13AQ9BXU3 409 aaPredicted RBP27.6■■■□□ 2.01
SOX1-201ENST00000330949 TNNI3KQ59H18 835 aa27.6■■■□□ 2.01
SOX1-201ENST00000330949 NLRP2Q9NX02 1062 aa27.6■■■□□ 2.01
SOX1-201ENST00000330949 MYO6Q9UM54 1294 aa27.6■■■□□ 2.01
SOX1-201ENST00000330949 FPGT-TNNI3KV9GXZ4 949 aa27.6■■■□□ 2.01
SOX1-201ENST00000330949 CPLX1O14810 134 aa27.59■■■□□ 2.01
SOX1-201ENST00000330949 INPP5BP32019 993 aa27.59■■■□□ 2.01
SOX1-201ENST00000330949 DDX46Q7L014 1031 aaKnown RBP27.59■■■□□ 2.01
SOX1-201ENST00000330949 KCNH3Q9ULD8 1083 aa27.59■■■□□ 2.01
SOX1-201ENST00000330949 SHTN1A0MZ66 631 aa27.59■■■□□ 2.01
SOX1-201ENST00000330949 TFRCP02786 760 aaKnown RBP27.59■■■□□ 2.01
SOX1-201ENST00000330949 IGKV5-2P06315 115 aa27.59■■■□□ 2.01
SOX1-201ENST00000330949 AKAP17AQ02040 695 aaKnown RBP27.59■■■□□ 2.01
SOX1-201ENST00000330949 FMR1Q06787 632 aaKnown RBP eCLIP27.59■■■□□ 2.01
SOX1-201ENST00000330949 FBXW10Q5XX13 1052 aa27.59■■■□□ 2.01
SOX1-201ENST00000330949 CNPY4Q8N129 248 aa27.59■■■□□ 2.01
SOX1-201ENST00000330949 AMOTQ4VCS5 1084 aa27.59■■■□□ 2.01
SOX1-201ENST00000330949 CDC5LQ99459 802 aaKnown RBP27.59■■■□□ 2.01
SOX1-201ENST00000330949 CRACR2AQ9BSW2 395 aa27.59■■■□□ 2.01
SOX1-201ENST00000330949 IRAK1P51617 712 aa27.58■■■□□ 2.01
SOX1-201ENST00000330949 TTLL5Q6EMB2 1281 aa27.58■■■□□ 2.01
SOX1-201ENST00000330949 XAGE3Q8WTP9 111 aa27.58■■■□□ 2.01
SOX1-201ENST00000330949 ATP5J2-PTCD1G3V325 749 aa27.58■■■□□ 2.01
SOX1-201ENST00000330949 PTCD1O75127 700 aaKnown RBP27.58■■■□□ 2.01
SOX1-201ENST00000330949 USP14P54578 494 aa27.58■■■□□ 2.01
SOX1-201ENST00000330949 RBL2Q08999 1139 aa27.58■■■□□ 2.01
SOX1-201ENST00000330949 COPS6Q7L5N1 327 aa27.58■■■□□ 2.01
SOX1-201ENST00000330949 KAT14Q9H8E8 782 aa27.58■■■□□ 2.01
SOX1-201ENST00000330949 A1CFQ9NQ94 594 aaKnown RBP27.58■■■□□ 2.01
SOX1-201ENST00000330949 MAN1B1Q9UKM7 699 aa27.58■■■□□ 2.01
SOX1-201ENST00000330949 PTPAQ15257 358 aa27.57■■■□□ 2
SOX1-201ENST00000330949 ZC3H4Q9UPT8 1303 aaKnown RBP27.57■■■□□ 2
SOX1-201ENST00000330949 CCDC51Q96ER9 411 aa27.57■■■□□ 2
SOX1-201ENST00000330949 GJB4Q9NTQ9 266 aa27.57■■■□□ 2
SOX1-201ENST00000330949 GOLGA6CA6NDK9 693 aa27.56■■■□□ 2
SOX1-201ENST00000330949 GOLGA6DP0CG33 693 aa27.56■■■□□ 2
SOX1-201ENST00000330949 AMPD2Q01433 879 aa27.56■■■□□ 2
SOX1-201ENST00000330949 PPFIA1Q13136 1202 aa27.56■■■□□ 2
SOX1-201ENST00000330949 CNGA4Q8IV77 575 aa27.56■■■□□ 2
SOX1-201ENST00000330949 GOLGA6AQ9NYA3 693 aa27.56■■■□□ 2
SOX1-201ENST00000330949 MFAP3LO75121 409 aa27.55■■■□□ 2
SOX1-201ENST00000330949 DDX58O95786 925 aaKnown RBP27.55■■■□□ 2
SOX1-201ENST00000330949 HSPD1P10809 573 aaKnown RBP27.55■■■□□ 2
SOX1-201ENST00000330949 GGCXP38435 758 aa27.55■■■□□ 2
SOX1-201ENST00000330949 MDM2Q00987 491 aaPredicted RBP27.55■■■□□ 2
SOX1-201ENST00000330949 PRPF38AQ8NAV1 312 aaKnown RBP27.55■■■□□ 2
SOX1-201ENST00000330949 BCAS4Q8TDM0 211 aa27.55■■■□□ 2
SOX1-201ENST00000330949 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.55■■■□□ 2
SOX1-201ENST00000330949 SAMSN1Q9NSI8 373 aaKnown RBP27.55■■■□□ 2
SOX1-201ENST00000330949 PALLDQ8WX93 1383 aa27.55■■■□□ 2
SOX1-201ENST00000330949 GOLGA8BA8MQT2 603 aa27.55■■■□□ 2
SOX1-201ENST00000330949 GBP6Q6ZN66 633 aa27.55■■■□□ 2
SOX1-201ENST00000330949 TRMT44Q8IYL2 757 aaKnown RBP27.55■■■□□ 2
SOX1-201ENST00000330949 TRIML1Q8N9V2 468 aa27.55■■■□□ 2
SOX1-201ENST00000330949 TARSL2A2RTX5 802 aaKnown RBP27.54■■■□□ 2
SOX1-201ENST00000330949 NT5DC1Q5TFE4 455 aa27.54■■■□□ 2
SOX1-201ENST00000330949 NCAPH2Q6IBW4 605 aa27.54■■■□□ 2
SOX1-201ENST00000330949 COPRSQ9NQ92 184 aa27.54■■■□□ 2
SOX1-201ENST00000330949 TRDNQ13061 729 aa27.54■■■□□ 2
SOX1-201ENST00000330949 POSTNQ15063 836 aa27.54■■■□□ 2
SOX1-201ENST00000330949 TICAM2Q86XR7 235 aa27.54■■■□□ 2
SOX1-201ENST00000330949 CPLX3Q8WVH0 158 aa27.54■■■□□ 2
SOX1-201ENST00000330949 STAG1Q8WVM7 1258 aa27.54■■■□□ 2
SOX1-201ENST00000330949 RIN2Q8WYP3 895 aaPredicted RBP27.54■■■□□ 2
SOX1-201ENST00000330949 CABS1Q96KC9 395 aa27.54■■■□□ 2
SOX1-201ENST00000330949 MAP3K15Q6ZN16 1313 aa27.54■■■□□ 2
SOX1-201ENST00000330949 KLF18A0A0U1RQI7 1052 aa27.54■■■□□ 2
SOX1-201ENST00000330949 PDIA6Q15084 440 aa27.54■■■□□ 2
SOX1-201ENST00000330949 VPS37DQ86XT2 251 aa27.54■■■□□ 2
SOX1-201ENST00000330949 CAPS2Q9BXY5 557 aa27.53■■■□□ 2
SOX1-201ENST00000330949 DDX21Q9NR30 783 aaKnown RBP eCLIP27.53■■■□□ 2
SOX1-201ENST00000330949 ATXN2Q99700 1313 aaKnown RBP27.53■■■□□ 2
SOX1-201ENST00000330949 TFCP2Q12800 502 aa27.53■■■□□ 2
SOX1-201ENST00000330949 TMTC1Q8IUR5 882 aa27.53■■■□□ 2
SOX1-201ENST00000330949 CABLES1Q8TDN4 633 aa27.53■■■□□ 2
SOX1-201ENST00000330949 TEX33O43247 280 aa27.52■■■□□ 2
SOX1-201ENST00000330949 FECHP22830 423 aa27.52■■■□□ 2
SOX1-201ENST00000330949 ERCC5P28715 1186 aaPredicted RBP27.52■■■□□ 2
SOX1-201ENST00000330949 NEXNQ0ZGT2 675 aa27.52■■■□□ 2
SOX1-201ENST00000330949 WWC3Q9ULE0 1092 aa27.52■■■□□ 2
SOX1-201ENST00000330949 A0A0G2JLW4 131 aa27.52■■■□□ 2
SOX1-201ENST00000330949 EIF3HO15372 352 aaKnown RBP eCLIP27.52■■■□□ 2
SOX1-201ENST00000330949 DDR1Q08345 913 aa27.52■■■□□ 2
SOX1-201ENST00000330949 MORC3Q14149 939 aa27.52■■■□□ 2
SOX1-201ENST00000330949 ZNF790Q6PG37 636 aa27.52■■■□□ 2
SOX1-201ENST00000330949 ACRBPQ8NEB7 543 aa27.52■■■□□ 2
SOX1-201ENST00000330949 MAP3K14Q99558 947 aa27.52■■■□□ 2
SOX1-201ENST00000330949 DBNDD2Q9BQY9 259 aa27.52■■■□□ 2
SOX1-201ENST00000330949 HPS5Q9UPZ3 1129 aa27.52■■■□□ 2
SOX1-201ENST00000330949 FOXN1O15353 648 aa27.51■■□□□ 1.99
SOX1-201ENST00000330949 TTC39AQ5SRH9 613 aa27.51■■□□□ 1.99
SOX1-201ENST00000330949 UBE3BQ7Z3V4 1068 aa27.51■■□□□ 1.99
SOX1-201ENST00000330949 GPHNQ9NQX3 736 aaPredicted RBP27.51■■□□□ 1.99
SOX1-201ENST00000330949 CSB-PGBD3P0DP91 1061 aa27.51■■□□□ 1.99
SOX1-201ENST00000330949 TDO2P48775 406 aa27.51■■□□□ 1.99
SOX1-201ENST00000330949 RPGRIP1Q96KN7 1286 aa27.51■■□□□ 1.99
SOX1-201ENST00000330949 KDM6AO15550 1401 aaPredicted RBP27.51■■□□□ 1.99
SOX1-201ENST00000330949 PBX1P40424 430 aa27.5■■□□□ 1.99
SOX1-201ENST00000330949 PLCD1P51178 756 aa27.5■■□□□ 1.99
SOX1-201ENST00000330949 ZMYM1Q5SVZ6 1142 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms