RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 DDRGK1Q96HY6 314 aa22.79■■□□□ 1.24
MRPL54-201ENST00000330133 ATP8A2Q9NTI2 1148 aa22.79■■□□□ 1.24
MRPL54-201ENST00000330133 SLC4A4Q9Y6R1 1079 aa22.79■■□□□ 1.24
MRPL54-201ENST00000330133 SPDYE5A6NIY4 337 aa22.78■■□□□ 1.24
MRPL54-201ENST00000330133 FAM196BA6NMK8 535 aa22.78■■□□□ 1.24
MRPL54-201ENST00000330133 PRKAB2O43741 272 aa22.78■■□□□ 1.24
MRPL54-201ENST00000330133 CTNND1O60716 968 aaKnown RBP22.78■■□□□ 1.24
MRPL54-201ENST00000330133 PDE4AP27815 886 aa22.78■■□□□ 1.24
MRPL54-201ENST00000330133 GJA5P36382 358 aa22.78■■□□□ 1.24
MRPL54-201ENST00000330133 SLC4A8Q2Y0W8 1093 aa22.78■■□□□ 1.24
MRPL54-201ENST00000330133 RILPL2Q969X0 211 aa22.78■■□□□ 1.24
MRPL54-201ENST00000330133 OTUD5Q96G74 571 aa22.78■■□□□ 1.24
MRPL54-201ENST00000330133 DCP1AQ9NPI6 582 aaPredicted RBP22.78■■□□□ 1.24
MRPL54-201ENST00000330133 PICK1Q9NRD5 415 aa22.78■■□□□ 1.24
MRPL54-201ENST00000330133 MCM9Q9NXL9 1143 aa22.78■■□□□ 1.24
MRPL54-201ENST00000330133 TM4SF4P48230 202 aa22.77■■□□□ 1.24
MRPL54-201ENST00000330133 INHBEP58166 350 aa22.77■■□□□ 1.24
MRPL54-201ENST00000330133 CENPQQ7L2Z9 268 aaPredicted RBP22.77■■□□□ 1.24
MRPL54-201ENST00000330133 METTL16Q86W50 562 aaKnown RBP22.77■■□□□ 1.24
MRPL54-201ENST00000330133 TICAM2Q86XR7 235 aa22.77■■□□□ 1.24
MRPL54-201ENST00000330133 SCYL3Q8IZE3 742 aa22.77■■□□□ 1.24
MRPL54-201ENST00000330133 CNKSR2Q8WXI2 1034 aa22.77■■□□□ 1.24
MRPL54-201ENST00000330133 STRBPQ96SI9 672 aaKnown RBP22.77■■□□□ 1.24
MRPL54-201ENST00000330133 THSD7BQ9C0I4 1608 aa22.77■■□□□ 1.24
MRPL54-201ENST00000330133 CA12O43570 354 aa22.76■■□□□ 1.23
MRPL54-201ENST00000330133 PPATQ06203 517 aa22.76■■□□□ 1.23
MRPL54-201ENST00000330133 ZMYM1Q5SVZ6 1142 aa22.76■■□□□ 1.23
MRPL54-201ENST00000330133 FOXN1O15353 648 aa22.75■■□□□ 1.23
MRPL54-201ENST00000330133 GPAA1O43292 621 aa22.75■■□□□ 1.23
MRPL54-201ENST00000330133 GNAT2P19087 354 aa22.75■■□□□ 1.23
MRPL54-201ENST00000330133 GTF2A2P52657 109 aa22.75■■□□□ 1.23
MRPL54-201ENST00000330133 PPIL2Q13356 520 aa22.75■■□□□ 1.23
MRPL54-201ENST00000330133 AMOTL1Q8IY63 956 aa22.75■■□□□ 1.23
MRPL54-201ENST00000330133 CCDC136Q96JN2 1154 aa22.75■■□□□ 1.23
MRPL54-201ENST00000330133 EHD4Q9H223 541 aa22.75■■□□□ 1.23
MRPL54-201ENST00000330133 SERPINB13Q9UIV8 391 aa22.75■■□□□ 1.23
MRPL54-201ENST00000330133 M0R2C6 588 aa22.74■■□□□ 1.23
MRPL54-201ENST00000330133 CTCFP49711 727 aaPredicted RBP22.74■■□□□ 1.23
MRPL54-201ENST00000330133 CAP2P40123 477 aa22.73■■□□□ 1.23
MRPL54-201ENST00000330133 PLCD1P51178 756 aa22.73■■□□□ 1.23
MRPL54-201ENST00000330133 SEC62Q99442 399 aaKnown RBP22.73■■□□□ 1.23
MRPL54-201ENST00000330133 RNF186Q9NXI6 227 aa22.73■■□□□ 1.23
MRPL54-201ENST00000330133 TRPA1O75762 1119 aa22.72■■□□□ 1.23
MRPL54-201ENST00000330133 PTPRAP18433 802 aa22.72■■□□□ 1.23
MRPL54-201ENST00000330133 SNAPC2Q13487 334 aa22.72■■□□□ 1.23
MRPL54-201ENST00000330133 OTUD7BQ6GQQ9 843 aa22.72■■□□□ 1.23
MRPL54-201ENST00000330133 GIMAP6Q6P9H5 292 aa22.72■■□□□ 1.23
MRPL54-201ENST00000330133 DNAJC18Q9H819 358 aa22.72■■□□□ 1.23
MRPL54-201ENST00000330133 HELLSQ9NRZ9 838 aa22.72■■□□□ 1.23
MRPL54-201ENST00000330133 SAGE1Q9NXZ1 904 aa22.72■■□□□ 1.23
MRPL54-201ENST00000330133 ZHX2Q9Y6X8 837 aa22.72■■□□□ 1.23
MRPL54-201ENST00000330133 PATL2C9JE40 543 aaKnown RBP22.71■■□□□ 1.23
MRPL54-201ENST00000330133 USP17L12C9JPN9 530 aa22.71■■□□□ 1.23
MRPL54-201ENST00000330133 USP17L21D6R901 530 aa22.71■■□□□ 1.23
MRPL54-201ENST00000330133 IRF6O14896 467 aa22.71■■□□□ 1.23
MRPL54-201ENST00000330133 APPP05067 770 aa22.71■■□□□ 1.23
MRPL54-201ENST00000330133 CETPP11597 493 aa22.71■■□□□ 1.23
MRPL54-201ENST00000330133 MS4A4AQ96JQ5 239 aa22.71■■□□□ 1.23
MRPL54-201ENST00000330133 MYH7P12883 1935 aa22.7■■□□□ 1.23
MRPL54-201ENST00000330133 OTOFQ9HC10 1997 aa22.7■■□□□ 1.23
MRPL54-201ENST00000330133 CCL15-CCL14A0A0B4J2E2 113 aa22.7■■□□□ 1.22
MRPL54-201ENST00000330133 TESPA1A2RU30 521 aaPredicted RBP22.7■■□□□ 1.22
MRPL54-201ENST00000330133 GSG1L2A8MUP6 293 aa22.7■■□□□ 1.22
MRPL54-201ENST00000330133 ALDH1A1P00352 501 aa22.7■■□□□ 1.22
MRPL54-201ENST00000330133 CYP2D6P10635 497 aa22.7■■□□□ 1.22
MRPL54-201ENST00000330133 RRP1BQ14684 758 aaKnown RBP22.7■■□□□ 1.22
MRPL54-201ENST00000330133 CCL15Q16663 113 aa22.7■■□□□ 1.22
MRPL54-201ENST00000330133 TTC22Q5TAA0 569 aa22.7■■□□□ 1.22
MRPL54-201ENST00000330133 IFNL1Q8IU54 200 aa22.7■■□□□ 1.22
MRPL54-201ENST00000330133 GINM1Q9NU53 330 aa22.7■■□□□ 1.22
MRPL54-201ENST00000330133 FOCADQ5VW36 1801 aa22.7■■□□□ 1.22
MRPL54-201ENST00000330133 CXCL11O14625 94 aa22.69■■□□□ 1.22
MRPL54-201ENST00000330133 HSPA8P11142 646 aaKnown RBP22.69■■□□□ 1.22
MRPL54-201ENST00000330133 SDSP20132 328 aa22.69■■□□□ 1.22
MRPL54-201ENST00000330133 MCMDC2Q4G0Z9 681 aa22.69■■□□□ 1.22
MRPL54-201ENST00000330133 C12orf60Q5U649 245 aa22.69■■□□□ 1.22
MRPL54-201ENST00000330133 TATDN1Q6P1N9 297 aa22.69■■□□□ 1.22
MRPL54-201ENST00000330133 CTR9Q6PD62 1173 aa22.69■■□□□ 1.22
MRPL54-201ENST00000330133 NACAP1Q9BZK3 213 aa22.69■■□□□ 1.22
MRPL54-201ENST00000330133 ARPP21Q9UBL0 812 aaPredicted RBP22.69■■□□□ 1.22
MRPL54-201ENST00000330133 TSKSQ9UJT2 592 aa22.69■■□□□ 1.22
MRPL54-201ENST00000330133 TAOK2Q9UL54 1235 aa22.69■■□□□ 1.22
MRPL54-201ENST00000330133 KCNH4Q9UQ05 1017 aa22.69■■□□□ 1.22
MRPL54-201ENST00000330133 CDK5RAP2Q96SN8 1893 aa22.68■■□□□ 1.22
MRPL54-201ENST00000330133 HIP1O00291 1037 aa22.68■■□□□ 1.22
MRPL54-201ENST00000330133 ASNSP08243 561 aa22.68■■□□□ 1.22
MRPL54-201ENST00000330133 TDO2P48775 406 aa22.68■■□□□ 1.22
MRPL54-201ENST00000330133 CERKLQ49MI3 558 aaPredicted RBP22.68■■□□□ 1.22
MRPL54-201ENST00000330133 ERICH6BQ5W0A0 696 aa22.68■■□□□ 1.22
MRPL54-201ENST00000330133 BRI3BPQ8WY22 251 aa22.68■■□□□ 1.22
MRPL54-201ENST00000330133 FAM227BQ96M60 508 aa22.68■■□□□ 1.22
MRPL54-201ENST00000330133 TBC1D2Q9BYX2 928 aa22.68■■□□□ 1.22
MRPL54-201ENST00000330133 SWAP70Q9UH65 585 aa22.68■■□□□ 1.22
MRPL54-201ENST00000330133 USP17L5A8MUK1 530 aa22.67■■□□□ 1.22
MRPL54-201ENST00000330133 GDF11O95390 407 aa22.67■■□□□ 1.22
MRPL54-201ENST00000330133 LBX1P52954 281 aa22.67■■□□□ 1.22
MRPL54-201ENST00000330133 GABPAQ06546 454 aa22.67■■□□□ 1.22
MRPL54-201ENST00000330133 NMIQ13287 307 aaPredicted RBP22.67■■□□□ 1.22
MRPL54-201ENST00000330133 SBK1Q52WX2 424 aa22.67■■□□□ 1.22
MRPL54-201ENST00000330133 CCDC129Q6ZRS4 1044 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms