RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 IL17RAQ96F46 866 aa19.66■□□□□ 0.74
PDLIM1-201ENST00000329399 RIOK1Q9BRS2 568 aaKnown RBP19.66■□□□□ 0.74
PDLIM1-201ENST00000329399 OSBPL5Q9H0X9 879 aaPredicted RBP19.66■□□□□ 0.74
PDLIM1-201ENST00000329399 NPM3O75607 178 aaKnown RBP19.65■□□□□ 0.74
PDLIM1-201ENST00000329399 BAG3O95817 575 aa19.65■□□□□ 0.74
PDLIM1-201ENST00000329399 RRP1BQ14684 758 aaKnown RBP19.65■□□□□ 0.74
PDLIM1-201ENST00000329399 RABEP1Q15276 862 aa19.65■□□□□ 0.74
PDLIM1-201ENST00000329399 OPTNQ96CV9 577 aa19.65■□□□□ 0.74
PDLIM1-201ENST00000329399 RNF186Q9NXI6 227 aa19.65■□□□□ 0.74
PDLIM1-201ENST00000329399 SLC4A8Q2Y0W8 1093 aa19.64■□□□□ 0.73
PDLIM1-201ENST00000329399 ZNF341Q9BYN7 854 aa19.64■□□□□ 0.73
PDLIM1-201ENST00000329399 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.64■□□□□ 0.73
PDLIM1-201ENST00000329399 SAP30BPQ9UHR5 308 aaKnown RBP19.64■□□□□ 0.73
PDLIM1-201ENST00000329399 MAST2Q6P0Q8 1798 aa19.63■□□□□ 0.73
PDLIM1-201ENST00000329399 UNCXA6NJT0 531 aa19.63■□□□□ 0.73
PDLIM1-201ENST00000329399 TRPA1O75762 1119 aa19.63■□□□□ 0.73
PDLIM1-201ENST00000329399 ADD2P35612 726 aa19.63■□□□□ 0.73
PDLIM1-201ENST00000329399 TM4SF4P48230 202 aa19.63■□□□□ 0.73
PDLIM1-201ENST00000329399 EVX2Q03828 476 aa19.63■□□□□ 0.73
PDLIM1-201ENST00000329399 DCAF15Q66K64 600 aa19.63■□□□□ 0.73
PDLIM1-201ENST00000329399 AIDAQ96BJ3 306 aa19.63■□□□□ 0.73
PDLIM1-201ENST00000329399 FSD1Q9BTV5 496 aa19.63■□□□□ 0.73
PDLIM1-201ENST00000329399 PALD1Q9ULE6 856 aa19.63■□□□□ 0.73
PDLIM1-201ENST00000329399 FLT1P17948 1338 aa19.63■□□□□ 0.73
PDLIM1-201ENST00000329399 KBTBD3Q8NAB2 608 aa19.62■□□□□ 0.73
PDLIM1-201ENST00000329399 MS4A4AQ96JQ5 239 aa19.62■□□□□ 0.73
PDLIM1-201ENST00000329399 PTPN18Q99952 460 aa19.62■□□□□ 0.73
PDLIM1-201ENST00000329399 NOL10Q9BSC4 688 aaKnown RBP19.62■□□□□ 0.73
PDLIM1-201ENST00000329399 R3HDMLQ9H3Y0 253 aa19.62■□□□□ 0.73
PDLIM1-201ENST00000329399 CDK5RAP2Q96SN8 1893 aa19.61■□□□□ 0.73
PDLIM1-201ENST00000329399 IGSF3O75054 1194 aa19.61■□□□□ 0.73
PDLIM1-201ENST00000329399 CTCFP49711 727 aaPredicted RBP19.61■□□□□ 0.73
PDLIM1-201ENST00000329399 LCORLQ8N3X6 602 aa19.61■□□□□ 0.73
PDLIM1-201ENST00000329399 OTUD5Q96G74 571 aa19.61■□□□□ 0.73
PDLIM1-201ENST00000329399 ANO2Q9NQ90 1003 aa19.61■□□□□ 0.73
PDLIM1-201ENST00000329399 MAGEB6P1A0A0J9YX57 407 aa19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 IGF2BP3O00425 579 aaKnown RBP eCLIP19.6■□□□□ 0.738e-7■■■□□ 16.8
PDLIM1-201ENST00000329399 PRKAB2O43741 272 aa19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 ZFYP08048 801 aaPredicted RBP19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 ZBTB48P10074 688 aaPredicted RBP19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 PLCG2P16885 1265 aa19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 HOOK2Q96ED9 719 aa19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 PUS7LQ9H0K6 701 aaKnown RBP19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 DNAJC18Q9H819 358 aa19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 ARMT1Q9H993 441 aa19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 CSADQ9Y600 493 aa19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 SPDYE5A6NIY4 337 aa19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 IRF6O14896 467 aa19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 JAG1P78504 1218 aa19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 SHROOM1Q2M3G4 852 aaPredicted RBP19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 CCDC84Q86UT8 332 aaPredicted RBP19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 HSCBQ8IWL3 235 aa19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 BEGAINQ9BUH8 593 aa19.6■□□□□ 0.73
PDLIM1-201ENST00000329399 SMIM22K7EJ46 135 aa19.59■□□□□ 0.73
PDLIM1-201ENST00000329399 CWC27Q6UX04 472 aaKnown RBP19.59■□□□□ 0.73
PDLIM1-201ENST00000329399 SDR42E1Q8WUS8 393 aa19.59■□□□□ 0.73
PDLIM1-201ENST00000329399 KIF2CQ99661 725 aa19.59■□□□□ 0.73
PDLIM1-201ENST00000329399 HELLSQ9NRZ9 838 aa19.59■□□□□ 0.73
PDLIM1-201ENST00000329399 TBC1D12O60347 775 aa19.58■□□□□ 0.72
PDLIM1-201ENST00000329399 TBC1D8O95759 1140 aa19.58■□□□□ 0.72
PDLIM1-201ENST00000329399 ZSCAN25Q6NSZ9 544 aa19.58■□□□□ 0.72
PDLIM1-201ENST00000329399 ERO1BQ86YB8 467 aa19.58■□□□□ 0.72
PDLIM1-201ENST00000329399 BRI3BPQ8WY22 251 aa19.58■□□□□ 0.72
PDLIM1-201ENST00000329399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.58■□□□□ 0.72
PDLIM1-201ENST00000329399 SIPA1L1O43166 1804 aa19.58■□□□□ 0.72
PDLIM1-201ENST00000329399 MBD4O95243 580 aa19.57■□□□□ 0.72
PDLIM1-201ENST00000329399 HSPA4P34932 840 aa19.57■□□□□ 0.72
PDLIM1-201ENST00000329399 USP5P45974 858 aa19.57■□□□□ 0.72
PDLIM1-201ENST00000329399 MCM2P49736 904 aa19.57■□□□□ 0.72
PDLIM1-201ENST00000329399 PLCD1P51178 756 aa19.57■□□□□ 0.72
PDLIM1-201ENST00000329399 UBE3CQ15386 1083 aa19.57■□□□□ 0.72
PDLIM1-201ENST00000329399 NOL9Q5SY16 702 aaKnown RBP19.57■□□□□ 0.72
PDLIM1-201ENST00000329399 IFNL1Q8IU54 200 aa19.57■□□□□ 0.72
PDLIM1-201ENST00000329399 OSBP2Q969R2 916 aa19.57■□□□□ 0.72
PDLIM1-201ENST00000329399 PI4KBQ9UBF8 816 aa19.57■□□□□ 0.72
PDLIM1-201ENST00000329399 CASP8AP2Q9UKL3 1982 aa19.56■□□□□ 0.72
PDLIM1-201ENST00000329399 COL2A1P02458 1487 aaPredicted RBP19.56■□□□□ 0.72
PDLIM1-201ENST00000329399 TESPA1A2RU30 521 aaPredicted RBP19.56■□□□□ 0.72
PDLIM1-201ENST00000329399 MANSC4A6NHS7 340 aaPredicted RBP19.56■□□□□ 0.72
PDLIM1-201ENST00000329399 ST18O60284 1047 aa19.56■□□□□ 0.72
PDLIM1-201ENST00000329399 TMED8Q6PL24 325 aaPredicted RBP19.56■□□□□ 0.72
PDLIM1-201ENST00000329399 METTL16Q86W50 562 aaKnown RBP19.56■□□□□ 0.72
PDLIM1-201ENST00000329399 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.56■□□□□ 0.72
PDLIM1-201ENST00000329399 LSG1Q9H089 658 aaKnown RBP19.56■□□□□ 0.72
PDLIM1-201ENST00000329399 FOCADQ5VW36 1801 aa19.55■□□□□ 0.72
PDLIM1-201ENST00000329399 CYP2D6P10635 497 aa19.55■□□□□ 0.72
PDLIM1-201ENST00000329399 PTPRAP18433 802 aa19.55■□□□□ 0.72
PDLIM1-201ENST00000329399 MCMDC2Q4G0Z9 681 aa19.55■□□□□ 0.72
PDLIM1-201ENST00000329399 SCYL3Q8IZE3 742 aa19.55■□□□□ 0.72
PDLIM1-201ENST00000329399 TBC1D2Q9BYX2 928 aa19.55■□□□□ 0.72
PDLIM1-201ENST00000329399 DHX36Q9H2U1 1008 aaKnown RBP19.55■□□□□ 0.72
PDLIM1-201ENST00000329399 PRDM10Q9NQV6 1147 aa19.55■□□□□ 0.72
PDLIM1-201ENST00000329399 RNF113AO15541 343 aaKnown RBP19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 CA12O43570 354 aa19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 SREBF2Q12772 1141 aa19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 NMIQ13287 307 aaPredicted RBP19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 PPIL2Q13356 520 aa19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 MOGSQ13724 837 aa19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 REM2Q8IYK8 340 aaPredicted RBP19.54■□□□□ 0.72
PDLIM1-201ENST00000329399 SEC62Q99442 399 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms