RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 GSDMBQ8TAX9 411 aa17.2■□□□□ 0.34
PTPN21-201ENST00000328736 POLR3AO14802 1390 aaPredicted RBP17.2■□□□□ 0.34
PTPN21-201ENST00000328736 ZBTB24O43167 697 aaPredicted RBP17.2■□□□□ 0.34
PTPN21-201ENST00000328736 PUM3Q15397 648 aaKnown RBP17.2■□□□□ 0.34
PTPN21-201ENST00000328736 FCHSD1Q86WN1 690 aa17.2■□□□□ 0.34
PTPN21-201ENST00000328736 GIGYF1O75420 1035 aaPredicted RBP17.2■□□□□ 0.34
PTPN21-201ENST00000328736 HOXC9P31274 260 aa17.2■□□□□ 0.34
PTPN21-201ENST00000328736 CYP26C1Q6V0L0 522 aa17.2■□□□□ 0.34
PTPN21-201ENST00000328736 INTS4Q96HW7 963 aaKnown RBP17.2■□□□□ 0.34
PTPN21-201ENST00000328736 NUP58Q9BVL2 599 aa17.2■□□□□ 0.34
PTPN21-201ENST00000328736 DCTPP1Q9H773 170 aa17.2■□□□□ 0.34
PTPN21-201ENST00000328736 NDUFB9Q9Y6M9 179 aa17.2■□□□□ 0.34
PTPN21-201ENST00000328736 CHMLP26374 656 aa17.2■□□□□ 0.34
PTPN21-201ENST00000328736 CETN3O15182 167 aa17.2■□□□□ 0.34
PTPN21-201ENST00000328736 HACE1Q8IYU2 909 aa17.2■□□□□ 0.34
PTPN21-201ENST00000328736 PDE6BP35913 854 aa17.19■□□□□ 0.34
PTPN21-201ENST00000328736 TBC1D8BQ0IIM8 1120 aa17.19■□□□□ 0.34
PTPN21-201ENST00000328736 CEP57Q86XR8 500 aa17.19■□□□□ 0.34
PTPN21-201ENST00000328736 NPATQ14207 1427 aa17.19■□□□□ 0.34
PTPN21-201ENST00000328736 ATP11AP98196 1134 aa17.19■□□□□ 0.34
PTPN21-201ENST00000328736 CEP85LQ5SZL2 805 aa17.19■□□□□ 0.34
PTPN21-201ENST00000328736 EPSTI1Q96J88 318 aa17.19■□□□□ 0.34
PTPN21-201ENST00000328736 BEGAINQ9BUH8 593 aa17.19■□□□□ 0.34
PTPN21-201ENST00000328736 SYT10Q6XYQ8 523 aa17.19■□□□□ 0.34
PTPN21-201ENST00000328736 RNMTO43148 476 aaKnown RBP17.19■□□□□ 0.34
PTPN21-201ENST00000328736 SATB1Q01826 763 aa17.19■□□□□ 0.34
PTPN21-201ENST00000328736 VIMP08670 466 aaKnown RBP17.18■□□□□ 0.34
PTPN21-201ENST00000328736 MYCLP12524 364 aaPredicted RBP17.18■□□□□ 0.34
PTPN21-201ENST00000328736 EIF2AK4Q9P2K8 1649 aaKnown RBP17.18■□□□□ 0.34
PTPN21-201ENST00000328736 KCNG1Q9UIX4 513 aa17.18■□□□□ 0.34
PTPN21-201ENST00000328736 TTF2Q9UNY4 1162 aaKnown RBP17.18■□□□□ 0.34
PTPN21-201ENST00000328736 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.18■□□□□ 0.34
PTPN21-201ENST00000328736 LGSNQ5TDP6 509 aa17.18■□□□□ 0.34
PTPN21-201ENST00000328736 USP26Q9BXU7 913 aa17.18■□□□□ 0.34
PTPN21-201ENST00000328736 PPANQ9NQ55 473 aaKnown RBP17.18■□□□□ 0.34
PTPN21-201ENST00000328736 NEDD9Q14511 834 aa17.18■□□□□ 0.34
PTPN21-201ENST00000328736 NCAPH2Q6IBW4 605 aa17.18■□□□□ 0.34
PTPN21-201ENST00000328736 CACNA2D3Q8IZS8 1091 aa17.18■□□□□ 0.34
PTPN21-201ENST00000328736 WDR66Q8TBY9 1149 aa17.18■□□□□ 0.34
PTPN21-201ENST00000328736 LZTS2Q9BRK4 669 aa17.18■□□□□ 0.34
PTPN21-201ENST00000328736 ZKSCAN5Q9Y2L8 839 aa17.18■□□□□ 0.34
PTPN21-201ENST00000328736 ZFYVE9O95405 1425 aa17.17■□□□□ 0.34
PTPN21-201ENST00000328736 RSRC1Q96IZ7 334 aaKnown RBP17.17■□□□□ 0.34
PTPN21-201ENST00000328736 ZNF594Q96JF6 807 aaPredicted RBP17.17■□□□□ 0.34
PTPN21-201ENST00000328736 NAPGQ99747 312 aaPredicted RBP17.17■□□□□ 0.34
PTPN21-201ENST00000328736 TRPM2O94759 1503 aa17.17■□□□□ 0.34
PTPN21-201ENST00000328736 UNC13AQ9UPW8 1703 aa17.17■□□□□ 0.34
PTPN21-201ENST00000328736 FAM160A1Q05DH4 1040 aa17.17■□□□□ 0.34
PTPN21-201ENST00000328736 PIK3AP1Q6ZUJ8 805 aa17.17■□□□□ 0.34
PTPN21-201ENST00000328736 ADCY7P51828 1080 aa17.17■□□□□ 0.34
PTPN21-201ENST00000328736 YWHAEP62258 255 aaKnown RBP17.17■□□□□ 0.34
PTPN21-201ENST00000328736 DNAJC21Q5F1R6 531 aaKnown RBP17.17■□□□□ 0.34
PTPN21-201ENST00000328736 RAB3IPQ96QF0 476 aaPredicted RBP17.17■□□□□ 0.34
PTPN21-201ENST00000328736 VCX3BQ9H321 246 aa17.17■□□□□ 0.34
PTPN21-201ENST00000328736 P4HA1P13674 534 aa17.17■□□□□ 0.34
PTPN21-201ENST00000328736 C8orf74Q6P047 294 aa17.17■□□□□ 0.34
PTPN21-201ENST00000328736 KRT25Q7Z3Z0 450 aa17.17■□□□□ 0.34
PTPN21-201ENST00000328736 GKAP1Q5VSY0 366 aaPredicted RBP17.16■□□□□ 0.34
PTPN21-201ENST00000328736 IGSF22Q8N9C0 903 aa17.16■□□□□ 0.34
PTPN21-201ENST00000328736 CARD10Q9BWT7 1032 aa17.16■□□□□ 0.34
PTPN21-201ENST00000328736 ZNF408Q9H9D4 720 aa17.16■□□□□ 0.34
PTPN21-201ENST00000328736 AFG3L2Q9Y4W6 797 aa17.16■□□□□ 0.34
PTPN21-201ENST00000328736 CASQ2O14958 399 aaPredicted RBP17.16■□□□□ 0.34
PTPN21-201ENST00000328736 RIOK1Q9BRS2 568 aaKnown RBP17.16■□□□□ 0.34
PTPN21-201ENST00000328736 CCNL1Q9UK58 526 aaPredicted RBP17.16■□□□□ 0.34
PTPN21-201ENST00000328736 PDE8AO60658 829 aa17.16■□□□□ 0.34
PTPN21-201ENST00000328736 PRPF6O94906 941 aaKnown RBP17.16■□□□□ 0.34
PTPN21-201ENST00000328736 ITGA6P23229 1130 aa17.16■□□□□ 0.34
PTPN21-201ENST00000328736 RPS6KB1P23443 525 aa17.16■□□□□ 0.34
PTPN21-201ENST00000328736 PPP2R3AQ06190 1150 aa17.16■□□□□ 0.34
PTPN21-201ENST00000328736 TTC31Q49AM3 519 aaPredicted RBP17.16■□□□□ 0.34
PTPN21-201ENST00000328736 PLBD2Q8NHP8 589 aa17.16■□□□□ 0.34
PTPN21-201ENST00000328736 DNM3Q9UQ16 869 aa17.16■□□□□ 0.34
PTPN21-201ENST00000328736 TIMM10P62072 90 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 SYCE1Q8N0S2 351 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 MAIP1Q8WWC4 291 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 LLPHQ9BRT6 129 aaKnown RBP17.15■□□□□ 0.34
PTPN21-201ENST00000328736 SYNRGQ9UMZ2 1314 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 BCRP11274 1271 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 DCUN1D2Q6PH85 259 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 B4GALNT4Q76KP1 1039 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.15■□□□□ 0.34
PTPN21-201ENST00000328736 RIOK3O14730 519 aaKnown RBP17.15■□□□□ 0.34
PTPN21-201ENST00000328736 ZBTB7BO15156 539 aaPredicted RBP17.15■□□□□ 0.34
PTPN21-201ENST00000328736 PAK1Q13153 545 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 SDCCAG8Q86SQ7 713 aaPredicted RBP17.15■□□□□ 0.34
PTPN21-201ENST00000328736 IFT20Q8IY31 132 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 C19orf44Q9H6X5 657 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 B4E1Z4 1266 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 H0YIN7 160 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 GBP1P32455 592 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 TCIRG1Q13488 830 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 CSGALNACT2Q8N6G5 542 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 NUP160Q12769 1436 aa17.15■□□□□ 0.34
PTPN21-201ENST00000328736 A0A1B0GVL5 298 aa17.14■□□□□ 0.34
PTPN21-201ENST00000328736 TXKP42681 527 aa17.14■□□□□ 0.34
PTPN21-201ENST00000328736 SPOUT1Q5T280 376 aaKnown RBP17.14■□□□□ 0.34
PTPN21-201ENST00000328736 CD2APQ9Y5K6 639 aa17.14■□□□□ 0.34
PTPN21-201ENST00000328736 YTHDC2Q9H6S0 1430 aaKnown RBP17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms