RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 MFAP3LO75121 409 aa14.53□□□□□ -0.08
CCDC60-201ENST00000327554 ARHGAP25P42331 645 aa14.53□□□□□ -0.08
CCDC60-201ENST00000327554 TTC39AQ5SRH9 613 aa14.53□□□□□ -0.08
CCDC60-201ENST00000327554 CCDC91Q7Z6B0 441 aa14.53□□□□□ -0.08
CCDC60-201ENST00000327554 ACRBPQ8NEB7 543 aa14.53□□□□□ -0.08
CCDC60-201ENST00000327554 CPLX3Q8WVH0 158 aa14.53□□□□□ -0.08
CCDC60-201ENST00000327554 METTL22Q9BUU2 404 aaPredicted RBP14.53□□□□□ -0.08
CCDC60-201ENST00000327554 DACH1Q9UI36 760 aa14.53□□□□□ -0.08
CCDC60-201ENST00000327554 TTF2Q9UNY4 1162 aaKnown RBP14.53□□□□□ -0.08
CCDC60-201ENST00000327554 MYO5AQ9Y4I1 1855 aaKnown RBP14.53□□□□□ -0.08
CCDC60-201ENST00000327554 NCAPH2Q6IBW4 605 aa14.53□□□□□ -0.08
CCDC60-201ENST00000327554 PPFIBP1Q86W92 1011 aa14.53□□□□□ -0.08
CCDC60-201ENST00000327554 IP6K1Q92551 441 aa14.53□□□□□ -0.08
CCDC60-201ENST00000327554 FAM107BQ9H098 131 aa14.53□□□□□ -0.08
CCDC60-201ENST00000327554 PLCD1P51178 756 aa14.52□□□□□ -0.08
CCDC60-201ENST00000327554 PLEKHO1Q53GL0 409 aaPredicted RBP14.52□□□□□ -0.08
CCDC60-201ENST00000327554 SPECC1Q5M775 1068 aa14.52□□□□□ -0.08
CCDC60-201ENST00000327554 OSBP2Q969R2 916 aa14.52□□□□□ -0.08
CCDC60-201ENST00000327554 HOOK1Q9UJC3 728 aaKnown RBP14.52□□□□□ -0.08
CCDC60-201ENST00000327554 MYO6Q9UM54 1294 aa14.52□□□□□ -0.08
CCDC60-201ENST00000327554 ERLIN2O94905 339 aa14.52□□□□□ -0.09
CCDC60-201ENST00000327554 USP14P54578 494 aa14.52□□□□□ -0.09
CCDC60-201ENST00000327554 ABTB2Q8N961 1025 aa14.52□□□□□ -0.09
CCDC60-201ENST00000327554 RIN2Q8WYP3 895 aaPredicted RBP14.52□□□□□ -0.09
CCDC60-201ENST00000327554 SEC31BQ9NQW1 1179 aa14.52□□□□□ -0.09
CCDC60-201ENST00000327554 CPDO75976 1380 aa14.52□□□□□ -0.09
CCDC60-201ENST00000327554 PLEKHG1Q9ULL1 1385 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 STK11IPQ8N1F8 1099 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 KRI1Q8N9T8 703 aaKnown RBP14.51□□□□□ -0.09
CCDC60-201ENST00000327554 TRIML1Q8N9V2 468 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 XAGE3Q8WTP9 111 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 MYO1AQ9UBC5 1043 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 ADD3Q9UEY8 706 aaKnown RBP14.51□□□□□ -0.09
CCDC60-201ENST00000327554 SERTAD1Q9UHV2 236 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 ZMYM6O95789 1325 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 ERCC5P28715 1186 aaPredicted RBP14.51□□□□□ -0.09
CCDC60-201ENST00000327554 CASP14P31944 242 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 LIG3P49916 1009 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 GRIN1Q05586 938 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 IMMTQ16891 758 aaKnown RBP14.51□□□□□ -0.09
CCDC60-201ENST00000327554 KCNV1Q6PIU1 500 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 GRAMD1CQ8IYS0 662 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 CCDC148Q8NFR7 591 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 SMARCC1Q92922 1105 aaPredicted RBP14.51□□□□□ -0.09
CCDC60-201ENST00000327554 NEUROD6Q96NK8 337 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 NFAT5O94916 1531 aa14.51□□□□□ -0.09
CCDC60-201ENST00000327554 GYPCP04921 128 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 FXR1P51114 621 aaKnown RBP eCLIP14.5□□□□□ -0.09
CCDC60-201ENST00000327554 ERVK-24P63145 666 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 SKIDA1Q1XH10 827 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 UBE3BQ7Z3V4 1068 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 COG1Q8WTW3 980 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 CXorf56Q9H5V9 222 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 ADAMTS7Q9UKP4 1686 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 MYL6BP14649 208 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 HNRNPH1P31943 449 aaKnown RBP14.5□□□□□ -0.09
CCDC60-201ENST00000327554 CCT5P48643 541 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 TIMM10P62072 90 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 COPS6Q7L5N1 327 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 ATG9AQ7Z3C6 839 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 NCOA7Q8NI08 942 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 SPATA20Q8TB22 786 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 CCDC51Q96ER9 411 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 KAT14Q9H8E8 782 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 WWC3Q9ULE0 1092 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 FAM169AQ9Y6X4 670 aa14.5□□□□□ -0.09
CCDC60-201ENST00000327554 KDM6AO15550 1401 aaPredicted RBP14.5□□□□□ -0.09
CCDC60-201ENST00000327554 WDR19Q8NEZ3 1342 aa14.49□□□□□ -0.09
CCDC60-201ENST00000327554 ARFGEF2Q9Y6D5 1785 aa14.49□□□□□ -0.09
CCDC60-201ENST00000327554 AGPSO00116 658 aa14.49□□□□□ -0.09
CCDC60-201ENST00000327554 POLR2DO15514 142 aaKnown RBP14.49□□□□□ -0.09
CCDC60-201ENST00000327554 FGAP02671 866 aa14.49□□□□□ -0.09
CCDC60-201ENST00000327554 LTKP29376 864 aa14.49□□□□□ -0.09
CCDC60-201ENST00000327554 GGCXP38435 758 aa14.49□□□□□ -0.09
CCDC60-201ENST00000327554 AKAP17AQ02040 695 aaKnown RBP14.49□□□□□ -0.09
CCDC60-201ENST00000327554 STIM1Q13586 685 aa14.49□□□□□ -0.09
CCDC60-201ENST00000327554 CT47A1Q5JQC4 288 aaPredicted RBP14.49□□□□□ -0.09
CCDC60-201ENST00000327554 CNGA4Q8IV77 575 aa14.49□□□□□ -0.09
CCDC60-201ENST00000327554 LRRC59Q96AG4 307 aaKnown RBP14.49□□□□□ -0.09
CCDC60-201ENST00000327554 IRAK1P51617 712 aa14.49□□□□□ -0.09
CCDC60-201ENST00000327554 C1orf141Q5JVX7 400 aa14.49□□□□□ -0.09
CCDC60-201ENST00000327554 CDKAL1Q5VV42 579 aa14.49□□□□□ -0.09
CCDC60-201ENST00000327554 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.49□□□□□ -0.09
CCDC60-201ENST00000327554 TRAPPC11Q7Z392 1133 aa14.49□□□□□ -0.09
CCDC60-201ENST00000327554 PHKBQ93100 1093 aa14.49□□□□□ -0.09
CCDC60-201ENST00000327554 RNF216Q9NWF9 866 aaPredicted RBP14.49□□□□□ -0.09
CCDC60-201ENST00000327554 FBXO2Q9UK22 296 aaPredicted RBP14.49□□□□□ -0.09
CCDC60-201ENST00000327554 ACTN4O43707 911 aaKnown RBP14.48□□□□□ -0.09
CCDC60-201ENST00000327554 MAP9Q49MG5 647 aa14.48□□□□□ -0.09
CCDC60-201ENST00000327554 AMOTQ4VCS5 1084 aa14.48□□□□□ -0.09
CCDC60-201ENST00000327554 SPATA1Q5VX52 437 aa14.48□□□□□ -0.09
CCDC60-201ENST00000327554 TMTC1Q8IUR5 882 aa14.48□□□□□ -0.09
CCDC60-201ENST00000327554 TAOK2Q9UL54 1235 aa14.48□□□□□ -0.09
CCDC60-201ENST00000327554 PARP4Q9UKK3 1724 aaKnown RBP14.48□□□□□ -0.09
CCDC60-201ENST00000327554 TNRQ92752 1358 aa14.48□□□□□ -0.09
CCDC60-201ENST00000327554 IFIT1P09914 478 aaKnown RBP14.48□□□□□ -0.09
CCDC60-201ENST00000327554 CASP7P55210 303 aa14.48□□□□□ -0.09
CCDC60-201ENST00000327554 FBXW10Q5XX13 1052 aa14.48□□□□□ -0.09
CCDC60-201ENST00000327554 NKX2-3Q8TAU0 364 aa14.48□□□□□ -0.09
CCDC60-201ENST00000327554 NBPF3Q9H094 633 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms