RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 PTPRFP10586 1907 aa18.64■□□□□ 0.58
TSFM-201ENST00000323833 FOXN1O15353 648 aa18.64■□□□□ 0.57
TSFM-201ENST00000323833 PRKAB2O43741 272 aa18.64■□□□□ 0.57
TSFM-201ENST00000323833 TBC1D12O60347 775 aa18.64■□□□□ 0.57
TSFM-201ENST00000323833 CENPBP07199 599 aaPredicted RBP18.64■□□□□ 0.57
TSFM-201ENST00000323833 ZBTB48P10074 688 aaPredicted RBP18.64■□□□□ 0.57
TSFM-201ENST00000323833 PDE4AP27815 886 aa18.64■□□□□ 0.57
TSFM-201ENST00000323833 AIDAQ96BJ3 306 aa18.64■□□□□ 0.57
TSFM-201ENST00000323833 PI4KBQ9UBF8 816 aa18.64■□□□□ 0.57
TSFM-201ENST00000323833 APPBP2Q92624 585 aa18.63■□□□□ 0.57
TSFM-201ENST00000323833 OSBP2Q969R2 916 aa18.63■□□□□ 0.57
TSFM-201ENST00000323833 OTUD5Q96G74 571 aa18.63■□□□□ 0.57
TSFM-201ENST00000323833 BEGAINQ9BUH8 593 aa18.63■□□□□ 0.57
TSFM-201ENST00000323833 OSBPL3Q9H4L5 887 aa18.63■□□□□ 0.57
TSFM-201ENST00000323833 SPDYE5A6NIY4 337 aa18.62■□□□□ 0.57
TSFM-201ENST00000323833 HLA-DOAP06340 250 aa18.62■□□□□ 0.57
TSFM-201ENST00000323833 ZFYP08048 801 aaPredicted RBP18.62■□□□□ 0.57
TSFM-201ENST00000323833 NOL9Q5SY16 702 aaKnown RBP18.62■□□□□ 0.57
TSFM-201ENST00000323833 ERO1BQ86YB8 467 aa18.62■□□□□ 0.57
TSFM-201ENST00000323833 EVI5LQ96CN4 794 aa18.62■□□□□ 0.57
TSFM-201ENST00000323833 DCP1AQ9NPI6 582 aaPredicted RBP18.62■□□□□ 0.57
TSFM-201ENST00000323833 TSKSQ9UJT2 592 aa18.62■□□□□ 0.57
TSFM-201ENST00000323833 CASP8AP2Q9UKL3 1982 aa18.62■□□□□ 0.57
TSFM-201ENST00000323833 TRIM6-TRIM34B2RNG4 842 aa18.61■□□□□ 0.57
TSFM-201ENST00000323833 M0R2C6 588 aa18.61■□□□□ 0.57
TSFM-201ENST00000323833 RRP1BQ14684 758 aaKnown RBP18.61■□□□□ 0.57
TSFM-201ENST00000323833 LRRFIP1Q32MZ4 808 aaKnown RBP18.61■□□□□ 0.57
TSFM-201ENST00000323833 FOXP4Q8IVH2 680 aaPredicted RBP18.61■□□□□ 0.57
TSFM-201ENST00000323833 REM2Q8IYK8 340 aaPredicted RBP18.61■□□□□ 0.57
TSFM-201ENST00000323833 CRACR2BQ8N4Y2 399 aaPredicted RBP18.61■□□□□ 0.57
TSFM-201ENST00000323833 SEC62Q99442 399 aaKnown RBP18.61■□□□□ 0.57
TSFM-201ENST00000323833 DNAJC18Q9H819 358 aa18.61■□□□□ 0.57
TSFM-201ENST00000323833 HERC5Q9UII4 1024 aaKnown RBP18.61■□□□□ 0.57
TSFM-201ENST00000323833 SLC4A4Q9Y6R1 1079 aa18.61■□□□□ 0.57
TSFM-201ENST00000323833 POLR3DP05423 398 aaPredicted RBP18.6■□□□□ 0.57
TSFM-201ENST00000323833 TM4SF4P48230 202 aa18.6■□□□□ 0.57
TSFM-201ENST00000323833 PLCD1P51178 756 aa18.6■□□□□ 0.57
TSFM-201ENST00000323833 EVX2Q03828 476 aa18.6■□□□□ 0.57
TSFM-201ENST00000323833 SCYL3Q8IZE3 742 aa18.6■□□□□ 0.57
TSFM-201ENST00000323833 RILPL2Q969X0 211 aa18.6■□□□□ 0.57
TSFM-201ENST00000323833 STRBPQ96SI9 672 aaKnown RBP18.6■□□□□ 0.57
TSFM-201ENST00000323833 TRIM34Q9BYJ4 488 aa18.6■□□□□ 0.57
TSFM-201ENST00000323833 RNF186Q9NXI6 227 aa18.6■□□□□ 0.57
TSFM-201ENST00000323833 MCM9Q9NXL9 1143 aa18.6■□□□□ 0.57
TSFM-201ENST00000323833 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.6■□□□□ 0.57
TSFM-201ENST00000323833 MANSC4A6NHS7 340 aaPredicted RBP18.59■□□□□ 0.57
TSFM-201ENST00000323833 IRF6O14896 467 aa18.59■□□□□ 0.57
TSFM-201ENST00000323833 CTNND1O60716 968 aaKnown RBP18.59■□□□□ 0.57
TSFM-201ENST00000323833 NEFLP07196 543 aa18.59■□□□□ 0.57
TSFM-201ENST00000323833 SREBF2Q12772 1141 aa18.59■□□□□ 0.57
TSFM-201ENST00000323833 ZMYM1Q5SVZ6 1142 aa18.59■□□□□ 0.57
TSFM-201ENST00000323833 TTC6Q86TZ1 520 aa18.59■□□□□ 0.57
TSFM-201ENST00000323833 METTL16Q86W50 562 aaKnown RBP18.59■□□□□ 0.57
TSFM-201ENST00000323833 ATP8A2Q9NTI2 1148 aa18.59■□□□□ 0.57
TSFM-201ENST00000323833 GPAA1O43292 621 aa18.58■□□□□ 0.56
TSFM-201ENST00000323833 TRPA1O75762 1119 aa18.58■□□□□ 0.56
TSFM-201ENST00000323833 CYP2D6P10635 497 aa18.58■□□□□ 0.56
TSFM-201ENST00000323833 HSPA8P11142 646 aaKnown RBP18.58■□□□□ 0.56
TSFM-201ENST00000323833 PPATQ06203 517 aa18.58■□□□□ 0.56
TSFM-201ENST00000323833 PPIL2Q13356 520 aa18.58■□□□□ 0.56
TSFM-201ENST00000323833 CCDC84Q86UT8 332 aaPredicted RBP18.58■□□□□ 0.56
TSFM-201ENST00000323833 MS4A4AQ96JQ5 239 aa18.58■□□□□ 0.56
TSFM-201ENST00000323833 PICK1Q9NRD5 415 aa18.58■□□□□ 0.56
TSFM-201ENST00000323833 PTPRAP18433 802 aa18.57■□□□□ 0.56
TSFM-201ENST00000323833 CAP2P40123 477 aa18.57■□□□□ 0.56
TSFM-201ENST00000323833 CTCFP49711 727 aaPredicted RBP18.57■□□□□ 0.56
TSFM-201ENST00000323833 LBX1P52954 281 aa18.57■□□□□ 0.56
TSFM-201ENST00000323833 EHD4Q9H223 541 aa18.57■□□□□ 0.56
TSFM-201ENST00000323833 SERPINB13Q9UIV8 391 aa18.57■□□□□ 0.56
TSFM-201ENST00000323833 ZHX2Q9Y6X8 837 aa18.57■□□□□ 0.56
TSFM-201ENST00000323833 CYP2D7A0A087X1C5 515 aa18.56■□□□□ 0.56
TSFM-201ENST00000323833 TESPA1A2RU30 521 aaPredicted RBP18.56■□□□□ 0.56
TSFM-201ENST00000323833 GSG1L2A8MUP6 293 aa18.56■□□□□ 0.56
TSFM-201ENST00000323833 SMIM22K7EJ46 135 aa18.56■□□□□ 0.56
TSFM-201ENST00000323833 IGF2BP3O00425 579 aaKnown RBP eCLIP18.56■□□□□ 0.56
TSFM-201ENST00000323833 GDF11O95390 407 aa18.56■□□□□ 0.56
TSFM-201ENST00000323833 GTF2A2P52657 109 aa18.56■□□□□ 0.56
TSFM-201ENST00000323833 INHBEP58166 350 aa18.56■□□□□ 0.56
TSFM-201ENST00000323833 JAG1P78504 1218 aa18.56■□□□□ 0.56
TSFM-201ENST00000323833 SHROOM1Q2M3G4 852 aaPredicted RBP18.56■□□□□ 0.56
TSFM-201ENST00000323833 CCDC129Q6ZRS4 1044 aa18.56■□□□□ 0.56
TSFM-201ENST00000323833 IFNL1Q8IU54 200 aa18.56■□□□□ 0.56
TSFM-201ENST00000323833 PTPN18Q99952 460 aa18.56■□□□□ 0.56
TSFM-201ENST00000323833 CCL15-CCL14A0A0B4J2E2 113 aa18.55■□□□□ 0.56
TSFM-201ENST00000323833 USP17L12C9JPN9 530 aa18.55■□□□□ 0.56
TSFM-201ENST00000323833 USP17L21D6R901 530 aa18.55■□□□□ 0.56
TSFM-201ENST00000323833 CA12O43570 354 aa18.55■□□□□ 0.56
TSFM-201ENST00000323833 CCL15Q16663 113 aa18.55■□□□□ 0.56
TSFM-201ENST00000323833 CENPQQ7L2Z9 268 aaPredicted RBP18.55■□□□□ 0.56
TSFM-201ENST00000323833 BRI3BPQ8WY22 251 aa18.55■□□□□ 0.56
TSFM-201ENST00000323833 DDRGK1Q96HY6 314 aa18.55■□□□□ 0.56
TSFM-201ENST00000323833 FAM227BQ96M60 508 aa18.55■□□□□ 0.56
TSFM-201ENST00000323833 SAGE1Q9NXZ1 904 aa18.55■□□□□ 0.56
TSFM-201ENST00000323833 A0A0D9SFI3 127 aa18.54■□□□□ 0.56
TSFM-201ENST00000323833 SHMT1P34896 483 aa18.54■□□□□ 0.56
TSFM-201ENST00000323833 GABPAQ06546 454 aa18.54■□□□□ 0.56
TSFM-201ENST00000323833 NMIQ13287 307 aaPredicted RBP18.54■□□□□ 0.56
TSFM-201ENST00000323833 SNAPC2Q13487 334 aa18.54■□□□□ 0.56
TSFM-201ENST00000323833 TTC22Q5TAA0 569 aa18.54■□□□□ 0.56
TSFM-201ENST00000323833 C12orf60Q5U649 245 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms