RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 CCDC122Q5T0U0 273 aa14.42□□□□□ -0.1
DNMT3A-202ENST00000321117 TCP11L1Q9NUJ3 509 aa14.42□□□□□ -0.1
DNMT3A-202ENST00000321117 FAM114A1Q8IWE2 563 aa14.42□□□□□ -0.1
DNMT3A-202ENST00000321117 ALS2CR12Q96Q35 445 aa14.42□□□□□ -0.1
DNMT3A-202ENST00000321117 CEMIPQ8WUJ3 1361 aa14.42□□□□□ -0.1
DNMT3A-202ENST00000321117 AKR1B10O60218 316 aa14.42□□□□□ -0.1
DNMT3A-202ENST00000321117 DNA2P51530 1060 aa14.42□□□□□ -0.1
DNMT3A-202ENST00000321117 EXOSC10Q01780 885 aaKnown RBP14.42□□□□□ -0.1
DNMT3A-202ENST00000321117 STAMQ92783 540 aa14.42□□□□□ -0.1
DNMT3A-202ENST00000321117 WWC3Q9ULE0 1092 aa14.42□□□□□ -0.1
DNMT3A-202ENST00000321117 ADGRL3Q9HAR2 1447 aa14.42□□□□□ -0.1
DNMT3A-202ENST00000321117 TSPY2A6NKD2 308 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 CIAO1O76071 339 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 TRIM14Q14142 442 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 LONRF3Q496Y0 759 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 TDRD12Q587J7 1177 aaKnown RBP14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 CEP89Q96ST8 783 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 VGLL3A8MV65 326 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 SSBP05455 408 aaKnown RBP eCLIP14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 KIF5AQ12840 1032 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 LONRF2Q1L5Z9 754 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 CCDC96Q2M329 555 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 DRC1Q96MC2 740 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 SLF1Q9BQI6 1058 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 MCM7P33993 719 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 AKNAD1Q5T1N1 836 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 ENGASEQ8NFI3 743 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 PARD6BQ9BYG5 372 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 PUS7LQ9H0K6 701 aaKnown RBP14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 TAB2Q9NYJ8 693 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 PCDH11XQ9BZA7 1347 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 PCDH11YQ9BZA8 1340 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 PLCD1P51178 756 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 TCIRG1Q13488 830 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 SRGAP1Q7Z6B7 1085 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 TAF4BQ92750 862 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 MAPK8IP1Q9UQF2 711 aa14.41□□□□□ -0.1
DNMT3A-202ENST00000321117 CLTCQ00610 1675 aaKnown RBP14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 CLSTN1O94985 981 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 KRT18P05783 430 aaKnown RBP14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 PDE6AP16499 860 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 TICAM2Q86XR7 235 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 MKNK2Q9HBH9 465 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 CDC23Q9UJX2 597 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 HNRNPH2P55795 449 aaKnown RBP14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 PI16Q6UXB8 463 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 CCDC51Q96ER9 411 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 ST7Q9NRC1 585 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 FBXO3Q9UK99 471 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 V9GY48 417 aaPredicted RBP14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 TCHHQ07283 1943 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 CCDC151A5D8V7 595 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 TMEM232C9JQI7 657 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 CALM1P0DP23 149 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 CALM2P0DP24 149 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 CALM3P0DP25 149 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 KCNJ6P48051 423 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 SPATA1Q5VX52 437 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 CMTR1Q8N1G2 835 aaKnown RBP14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 ZHX3Q9H4I2 956 aa14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.4□□□□□ -0.1
DNMT3A-202ENST00000321117 TACC1O75410 805 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 CTDNEP1O95476 244 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 FGFR1OPO95684 399 aaKnown RBP14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 PAK1Q13153 545 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 BMP2KQ9NSY1 1161 aaPredicted RBP14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 MAN1B1Q9UKM7 699 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 ERBB3P21860 1342 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 PUM3Q15397 648 aaKnown RBP14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 ODF2Q5BJF6 829 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 ENOX1Q8TC92 643 aaKnown RBP14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 CCDC42Q96M95 316 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 EXOC1Q9NV70 894 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 MAGEB6P1A0A0J9YX57 407 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 CCDC178Q5BJE1 867 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 WWC2Q6AWC2 1192 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 AFAP1L1Q8TED9 768 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 FERMT2Q96AC1 680 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 KAZALD1Q96I82 304 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 PDE11AQ9HCR9 933 aa14.39□□□□□ -0.11
DNMT3A-202ENST00000321117 H7C1W4 665 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 IL2RBP14784 551 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 ERCC5P28715 1186 aaPredicted RBP14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 AMPD3Q01432 767 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 PDE4BQ07343 736 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 TTC38Q5R3I4 469 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 KAT14Q9H8E8 782 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 VPS54Q9P1Q0 977 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 PATL2C9JE40 543 aaKnown RBP14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 USP5P45974 858 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 WHAMMP3Q1A5X7 153 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 TTC31Q49AM3 519 aaPredicted RBP14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 GRAMD1CQ8IYS0 662 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 SAMSN1Q9NSI8 373 aaKnown RBP14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 hCG_1642624A0A1W2PR95 340 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 SLFN14P0C7P3 912 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 IDEP14735 1019 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 CALML3P27482 149 aa14.38□□□□□ -0.11
DNMT3A-202ENST00000321117 IFNL3Q8IZI9 196 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms