RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 CUTAO60888 179 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 MMP1P03956 469 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 ZNF827Q17R98 1081 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 KRBA2Q6ZNG9 492 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 NYAP1Q6ZVC0 841 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 CABP5Q9NP86 173 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 ZNF215Q9UL58 517 aaPredicted RBP20.04■□□□□ 0.8
COL9A1-201ENST00000320755 MYL5Q02045 173 aa20.03■□□□□ 0.8
COL9A1-201ENST00000320755 PPARAQ07869 468 aa20.03■□□□□ 0.8
COL9A1-201ENST00000320755 E4F1Q66K89 784 aaPredicted RBP20.03■□□□□ 0.8
COL9A1-201ENST00000320755 TIGD1Q96MW7 591 aa20.03■□□□□ 0.8
COL9A1-201ENST00000320755 C4AP0C0L4 1744 aa20.03■□□□□ 0.8
COL9A1-201ENST00000320755 C4BP0C0L5 1744 aa20.03■□□□□ 0.8
COL9A1-201ENST00000320755 LRP6O75581 1613 aa20.03■□□□□ 0.8
COL9A1-201ENST00000320755 CAMTA2O94983 1202 aa20.03■□□□□ 0.8
COL9A1-201ENST00000320755 ZNF654Q8IZM8 581 aa20.03■□□□□ 0.8
COL9A1-201ENST00000320755 FANCBQ8NB91 859 aa20.03■□□□□ 0.8
COL9A1-201ENST00000320755 HSD3B7Q9H2F3 369 aa20.03■□□□□ 0.8
COL9A1-201ENST00000320755 IMPACTQ9P2X3 320 aa20.03■□□□□ 0.8
COL9A1-201ENST00000320755 TUBE1Q9UJT0 475 aa20.03■□□□□ 0.8
COL9A1-201ENST00000320755 SLIT2O94813 1529 aa20.03■□□□□ 0.8
COL9A1-201ENST00000320755 WASF1Q92558 559 aa20.02■□□□□ 0.8
COL9A1-201ENST00000320755 ABCA3Q99758 1704 aa20.02■□□□□ 0.8
COL9A1-201ENST00000320755 PDE4BQ07343 736 aa20.02■□□□□ 0.8
COL9A1-201ENST00000320755 CRACR2BQ8N4Y2 399 aaPredicted RBP20.02■□□□□ 0.8
COL9A1-201ENST00000320755 KIF18AQ8NI77 898 aa20.02■□□□□ 0.8
COL9A1-201ENST00000320755 STAG1Q8WVM7 1258 aa20.02■□□□□ 0.8
COL9A1-201ENST00000320755 TMEM232C9JQI7 657 aa20.01■□□□□ 0.79
COL9A1-201ENST00000320755 DYNLL1P63167 89 aaKnown RBP20.01■□□□□ 0.79
COL9A1-201ENST00000320755 USP49Q70CQ1 688 aa20.01■□□□□ 0.79
COL9A1-201ENST00000320755 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.01■□□□□ 0.79
COL9A1-201ENST00000320755 FAM205CA6NFA0 338 aa20.01■□□□□ 0.79
COL9A1-201ENST00000320755 GNAT2P19087 354 aa20.01■□□□□ 0.79
COL9A1-201ENST00000320755 HOMER1Q86YM7 354 aa20.01■□□□□ 0.79
COL9A1-201ENST00000320755 CCDC150Q8NCX0 1101 aa20.01■□□□□ 0.79
COL9A1-201ENST00000320755 SERTAD1Q9UHV2 236 aa20.01■□□□□ 0.79
COL9A1-201ENST00000320755 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.01■□□□□ 0.79
COL9A1-201ENST00000320755 MAGEB6P1A0A0J9YX57 407 aa20.01■□□□□ 0.79
COL9A1-201ENST00000320755 GTF2E1P29083 439 aaPredicted RBP20.01■□□□□ 0.79
COL9A1-201ENST00000320755 SYT10Q6XYQ8 523 aa20.01■□□□□ 0.79
COL9A1-201ENST00000320755 VPS54Q9P1Q0 977 aa20.01■□□□□ 0.79
COL9A1-201ENST00000320755 BAZ2BQ9UIF8 2168 aaKnown RBP20■□□□□ 0.79
COL9A1-201ENST00000320755 IKBKBO14920 756 aa20■□□□□ 0.79
COL9A1-201ENST00000320755 BMP6P22004 513 aa20■□□□□ 0.79
COL9A1-201ENST00000320755 AKAP17AQ02040 695 aaKnown RBP20■□□□□ 0.79
COL9A1-201ENST00000320755 C3orf67Q6ZVT6 689 aa20■□□□□ 0.79
COL9A1-201ENST00000320755 TRMT44Q8IYL2 757 aaKnown RBP20■□□□□ 0.79
COL9A1-201ENST00000320755 TNKSO95271 1327 aa20■□□□□ 0.79
COL9A1-201ENST00000320755 KCNQ2O43526 872 aa20■□□□□ 0.79
COL9A1-201ENST00000320755 NRDCO43847 1150 aa20■□□□□ 0.79
COL9A1-201ENST00000320755 NTSR2O95665 410 aa20■□□□□ 0.79
COL9A1-201ENST00000320755 PRR29P0C7W0 189 aa20■□□□□ 0.79
COL9A1-201ENST00000320755 SLC4A8Q2Y0W8 1093 aa20■□□□□ 0.79
COL9A1-201ENST00000320755 PPP1R13BQ96KQ4 1090 aa20■□□□□ 0.79
COL9A1-201ENST00000320755 NUTM2BA6NNL0 878 aaPredicted RBP19.99■□□□□ 0.79
COL9A1-201ENST00000320755 NUTM2EB1AL46 878 aaPredicted RBP19.99■□□□□ 0.79
COL9A1-201ENST00000320755 CDK11BP21127 795 aaKnown RBP19.99■□□□□ 0.79
COL9A1-201ENST00000320755 NUTM2AQ8IVF1 878 aaPredicted RBP19.99■□□□□ 0.79
COL9A1-201ENST00000320755 CCDC24Q8N4L8 307 aa19.99■□□□□ 0.79
COL9A1-201ENST00000320755 AK7Q96M32 723 aa19.99■□□□□ 0.79
COL9A1-201ENST00000320755 RNF41Q9H4P4 317 aaPredicted RBP19.99■□□□□ 0.79
COL9A1-201ENST00000320755 DEXIO95424 95 aa19.99■□□□□ 0.79
COL9A1-201ENST00000320755 PARP10Q53GL7 1025 aa19.99■□□□□ 0.79
COL9A1-201ENST00000320755 DISP2A7MBM2 1401 aa19.99■□□□□ 0.79
COL9A1-201ENST00000320755 CCDC196A0A1B0GTZ2 297 aa19.99■□□□□ 0.79
COL9A1-201ENST00000320755 ERFEQ4G0M1 354 aa19.99■□□□□ 0.79
COL9A1-201ENST00000320755 JAG2Q9Y219 1238 aa19.99■□□□□ 0.79
COL9A1-201ENST00000320755 STK36Q9NRP7 1315 aa19.98■□□□□ 0.79
COL9A1-201ENST00000320755 MARCH10Q8NA82 808 aaPredicted RBP19.98■□□□□ 0.79
COL9A1-201ENST00000320755 PNPLA7Q6ZV29 1317 aa19.98■□□□□ 0.79
COL9A1-201ENST00000320755 EVX2Q03828 476 aa19.98■□□□□ 0.79
COL9A1-201ENST00000320755 FAM177A1Q8N128 213 aaPredicted RBP19.98■□□□□ 0.79
COL9A1-201ENST00000320755 ESR2Q92731 530 aa19.98■□□□□ 0.79
COL9A1-201ENST00000320755 FBXO2Q9UK22 296 aaPredicted RBP19.98■□□□□ 0.79
COL9A1-201ENST00000320755 V9GY48 417 aaPredicted RBP19.98■□□□□ 0.79
COL9A1-201ENST00000320755 TOP1P11387 765 aaKnown RBP19.97■□□□□ 0.79
COL9A1-201ENST00000320755 POSTNQ15063 836 aa19.97■□□□□ 0.79
COL9A1-201ENST00000320755 RILPL1Q5EBL4 403 aa19.97■□□□□ 0.79
COL9A1-201ENST00000320755 ANKRD18AQ8IVF6 992 aa19.97■□□□□ 0.79
COL9A1-201ENST00000320755 TMTC2Q8N394 836 aa19.97■□□□□ 0.79
COL9A1-201ENST00000320755 CDC5LQ99459 802 aaKnown RBP19.97■□□□□ 0.79
COL9A1-201ENST00000320755 MAN1B1Q9UKM7 699 aa19.97■□□□□ 0.79
COL9A1-201ENST00000320755 PTPREP23469 700 aa19.96■□□□□ 0.79
COL9A1-201ENST00000320755 AFMP43652 599 aa19.96■□□□□ 0.79
COL9A1-201ENST00000320755 CSRNP2Q9H175 543 aa19.96■□□□□ 0.79
COL9A1-201ENST00000320755 CASP1P29466 404 aa19.96■□□□□ 0.79
COL9A1-201ENST00000320755 FOXP1Q9H334 677 aaPredicted RBP19.96■□□□□ 0.79
COL9A1-201ENST00000320755 GNL3LQ9NVN8 582 aaKnown RBP19.96■□□□□ 0.79
COL9A1-201ENST00000320755 HOOK1Q9UJC3 728 aaKnown RBP19.96■□□□□ 0.79
COL9A1-201ENST00000320755 FMR1Q06787 632 aaKnown RBP eCLIP19.96■□□□□ 0.79
COL9A1-201ENST00000320755 ELF2Q15723 593 aa19.96■□□□□ 0.79
COL9A1-201ENST00000320755 ENAHQ8N8S7 591 aaPredicted RBP19.96■□□□□ 0.79
COL9A1-201ENST00000320755 SMARCE1Q969G3 411 aa19.96■□□□□ 0.79
COL9A1-201ENST00000320755 DHX58Q96C10 678 aa19.96■□□□□ 0.79
COL9A1-201ENST00000320755 CBFA2T2O43439 604 aa19.95■□□□□ 0.78
COL9A1-201ENST00000320755 IGSF3O75054 1194 aa19.95■□□□□ 0.78
COL9A1-201ENST00000320755 PLEKHA8P1O95397 391 aa19.95■□□□□ 0.78
COL9A1-201ENST00000320755 EARS2Q5JPH6 523 aaKnown RBP19.95■□□□□ 0.78
COL9A1-201ENST00000320755 KLHL10Q6JEL2 608 aa19.95■□□□□ 0.78
COL9A1-201ENST00000320755 NFE2L3Q9Y4A8 694 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms