RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 BMP6P22004 513 aa23.88■■□□□ 1.41
CPNE7-202ENST00000319518 TTF1Q15361 905 aaPredicted RBP23.88■■□□□ 1.41
CPNE7-202ENST00000319518 STRBPQ96SI9 672 aaKnown RBP23.88■■□□□ 1.41
CPNE7-202ENST00000319518 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.88■■□□□ 1.41
CPNE7-202ENST00000319518 EPB41L4AQ9HCS5 686 aaPredicted RBP23.88■■□□□ 1.41
CPNE7-202ENST00000319518 SRP68Q9UHB9 627 aaKnown RBP23.88■■□□□ 1.41
CPNE7-202ENST00000319518 IQSEC3Q9UPP2 1182 aaPredicted RBP23.88■■□□□ 1.41
CPNE7-202ENST00000319518 ZNF652Q9Y2D9 606 aa23.88■■□□□ 1.41
CPNE7-202ENST00000319518 TAF1P21675 1872 aa23.88■■□□□ 1.41
CPNE7-202ENST00000319518 ZBTB43O43298 467 aa23.88■■□□□ 1.41
CPNE7-202ENST00000319518 CDKL5O76039 1030 aa23.88■■□□□ 1.41
CPNE7-202ENST00000319518 CHRNDQ07001 517 aa23.88■■□□□ 1.41
CPNE7-202ENST00000319518 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.88■■□□□ 1.41
CPNE7-202ENST00000319518 FAM53CQ9NYF3 392 aa23.88■■□□□ 1.41
CPNE7-202ENST00000319518 USP21Q9UK80 565 aa23.88■■□□□ 1.41
CPNE7-202ENST00000319518 FOXN1O15353 648 aa23.87■■□□□ 1.41
CPNE7-202ENST00000319518 MYL5Q02045 173 aa23.87■■□□□ 1.41
CPNE7-202ENST00000319518 GOLGA8FQ08AF8 430 aa23.87■■□□□ 1.41
CPNE7-202ENST00000319518 GOLGA8DPQ0D2H9 430 aa23.87■■□□□ 1.41
CPNE7-202ENST00000319518 SGMS1Q86VZ5 419 aa23.87■■□□□ 1.41
CPNE7-202ENST00000319518 CCDC24Q8N4L8 307 aa23.87■■□□□ 1.41
CPNE7-202ENST00000319518 CICQ96RK0 1608 aaPredicted RBP23.87■■□□□ 1.41
CPNE7-202ENST00000319518 TMEM232C9JQI7 657 aa23.86■■□□□ 1.41
CPNE7-202ENST00000319518 UBASH3AP57075 661 aa23.86■■□□□ 1.41
CPNE7-202ENST00000319518 PDE4BQ07343 736 aa23.86■■□□□ 1.41
CPNE7-202ENST00000319518 TBC1D9BQ66K14 1250 aa23.86■■□□□ 1.41
CPNE7-202ENST00000319518 AMIGO3Q86WK7 504 aa23.86■■□□□ 1.41
CPNE7-202ENST00000319518 TMEM87BQ96K49 555 aa23.86■■□□□ 1.41
CPNE7-202ENST00000319518 TMX1Q9H3N1 280 aa23.86■■□□□ 1.41
CPNE7-202ENST00000319518 ZNF446Q9NWS9 450 aa23.86■■□□□ 1.41
CPNE7-202ENST00000319518 NPHP1O15259 732 aa23.86■■□□□ 1.41
CPNE7-202ENST00000319518 IARSP41252 1262 aaKnown RBP23.86■■□□□ 1.41
CPNE7-202ENST00000319518 INTS13Q9NVM9 706 aa23.86■■□□□ 1.41
CPNE7-202ENST00000319518 GOLGA8AA7E2F4 631 aa23.85■■□□□ 1.41
CPNE7-202ENST00000319518 ERCC6LQ2NKX8 1250 aa23.85■■□□□ 1.41
CPNE7-202ENST00000319518 FNBP4Q8N3X1 1017 aaPredicted RBP23.85■■□□□ 1.41
CPNE7-202ENST00000319518 MAGEB6Q8N7X4 407 aa23.85■■□□□ 1.41
CPNE7-202ENST00000319518 JMYQ8N9B5 988 aa23.85■■□□□ 1.41
CPNE7-202ENST00000319518 PCDHA5Q9Y5H7 936 aa23.85■■□□□ 1.41
CPNE7-202ENST00000319518 GUCY1A2P33402 732 aa23.85■■□□□ 1.41
CPNE7-202ENST00000319518 SPECC1Q5M775 1068 aa23.85■■□□□ 1.41
CPNE7-202ENST00000319518 KRBA2Q6ZNG9 492 aa23.85■■□□□ 1.41
CPNE7-202ENST00000319518 FANCLQ9NW38 375 aa23.85■■□□□ 1.41
CPNE7-202ENST00000319518 ZSWIM5Q9P217 1185 aa23.85■■□□□ 1.41
CPNE7-202ENST00000319518 CTDSPL2Q05D32 466 aa23.84■■□□□ 1.41
CPNE7-202ENST00000319518 GNL2Q13823 731 aaKnown RBP23.84■■□□□ 1.41
CPNE7-202ENST00000319518 TMEM67Q5HYA8 995 aa23.84■■□□□ 1.41
CPNE7-202ENST00000319518 STK11IPQ8N1F8 1099 aa23.84■■□□□ 1.41
CPNE7-202ENST00000319518 KCNH3Q9ULD8 1083 aa23.84■■□□□ 1.41
CPNE7-202ENST00000319518 BCORQ6W2J9 1755 aa23.84■■□□□ 1.41
CPNE7-202ENST00000319518 ARAP2Q8WZ64 1704 aa23.84■■□□□ 1.41
CPNE7-202ENST00000319518 MDM2Q00987 491 aaPredicted RBP23.84■■□□□ 1.41
CPNE7-202ENST00000319518 GRIN1Q05586 938 aa23.84■■□□□ 1.41
CPNE7-202ENST00000319518 TRIM65Q6PJ69 517 aa23.84■■□□□ 1.41
CPNE7-202ENST00000319518 NFXL1Q6ZNB6 911 aa23.84■■□□□ 1.41
CPNE7-202ENST00000319518 VSTM4Q8IW00 320 aa23.84■■□□□ 1.41
CPNE7-202ENST00000319518 EP400Q96L91 3159 aa23.84■■□□□ 1.41
CPNE7-202ENST00000319518 CUTAO60888 179 aa23.83■■□□□ 1.41
CPNE7-202ENST00000319518 SERPINC1P01008 464 aa23.83■■□□□ 1.41
CPNE7-202ENST00000319518 TOB1P50616 345 aaPredicted RBP23.83■■□□□ 1.41
CPNE7-202ENST00000319518 CPLX2Q6PUV4 134 aaKnown RBP23.83■■□□□ 1.41
CPNE7-202ENST00000319518 CLEC4GQ6UXB4 293 aa23.83■■□□□ 1.41
CPNE7-202ENST00000319518 SLC26A6Q9BXS9 759 aa23.83■■□□□ 1.41
CPNE7-202ENST00000319518 CFAP100Q494V2 611 aa23.83■■□□□ 1.41
CPNE7-202ENST00000319518 KIF20AO95235 890 aa23.82■■□□□ 1.4
CPNE7-202ENST00000319518 H2AFXP16104 143 aaPredicted RBP23.82■■□□□ 1.4
CPNE7-202ENST00000319518 ETF1P62495 437 aaKnown RBP23.82■■□□□ 1.4
CPNE7-202ENST00000319518 ALX1Q15699 326 aa23.82■■□□□ 1.4
CPNE7-202ENST00000319518 TMEM139Q8IV31 216 aa23.82■■□□□ 1.4
CPNE7-202ENST00000319518 AIDAQ96BJ3 306 aa23.82■■□□□ 1.4
CPNE7-202ENST00000319518 BTBD18B2RXH4 712 aa23.82■■□□□ 1.4
CPNE7-202ENST00000319518 GNPATO15228 680 aa23.82■■□□□ 1.4
CPNE7-202ENST00000319518 GTF2E1P29083 439 aaPredicted RBP23.82■■□□□ 1.4
CPNE7-202ENST00000319518 IFNL3Q8IZI9 196 aa23.82■■□□□ 1.4
CPNE7-202ENST00000319518 CNNM3Q8NE01 707 aa23.82■■□□□ 1.4
CPNE7-202ENST00000319518 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.82■■□□□ 1.43e-9■■■□□ 14.8
CPNE7-202ENST00000319518 RTL9Q8NET4 1388 aa23.82■■□□□ 1.4
CPNE7-202ENST00000319518 LIFRP42702 1097 aa23.81■■□□□ 1.4
CPNE7-202ENST00000319518 DHX8Q14562 1220 aaKnown RBP23.81■■□□□ 1.4
CPNE7-202ENST00000319518 REXO1L1PQ8IX06 675 aa23.81■■□□□ 1.4
CPNE7-202ENST00000319518 ARMT1Q9H993 441 aa23.81■■□□□ 1.4
CPNE7-202ENST00000319518 LAMB2P55268 1798 aa23.81■■□□□ 1.4
CPNE7-202ENST00000319518 CNTNAP4Q9C0A0 1308 aa23.81■■□□□ 1.4
CPNE7-202ENST00000319518 STK36Q9NRP7 1315 aa23.81■■□□□ 1.4
CPNE7-202ENST00000319518 MBD4O95243 580 aa23.81■■□□□ 1.4
CPNE7-202ENST00000319518 FMNL1O95466 1100 aaPredicted RBP23.81■■□□□ 1.4
CPNE7-202ENST00000319518 SLFN14P0C7P3 912 aa23.81■■□□□ 1.4
CPNE7-202ENST00000319518 GYG1P46976 350 aa23.81■■□□□ 1.4
CPNE7-202ENST00000319518 NOSTRINQ8IVI9 506 aa23.81■■□□□ 1.4
CPNE7-202ENST00000319518 GABPB1Q06547 395 aaPredicted RBP23.8■■□□□ 1.4
CPNE7-202ENST00000319518 HSP90AA4PQ58FG1 418 aa23.8■■□□□ 1.4
CPNE7-202ENST00000319518 KRT222Q8N1A0 295 aa23.8■■□□□ 1.4
CPNE7-202ENST00000319518 CELF1Q92879 486 aaKnown RBP23.8■■□□□ 1.4
CPNE7-202ENST00000319518 DNAI1Q9UI46 699 aa23.8■■□□□ 1.4
CPNE7-202ENST00000319518 SLC12A7Q9Y666 1083 aa23.8■■□□□ 1.4
CPNE7-202ENST00000319518 PATL2C9JE40 543 aaKnown RBP23.8■■□□□ 1.4
CPNE7-202ENST00000319518 IFIT3O14879 490 aaKnown RBP23.8■■□□□ 1.4
CPNE7-202ENST00000319518 TRIM29Q14134 588 aa23.8■■□□□ 1.4
CPNE7-202ENST00000319518 HOMER1Q86YM7 354 aa23.8■■□□□ 1.4
CPNE7-202ENST00000319518 ANKRD18AQ8IVF6 992 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms