RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 HDAC1Q13547 482 aaPredicted RBP11.55□□□□□ -0.56
KARS-202ENST00000319410 GRIK5Q16478 980 aa11.55□□□□□ -0.56
KARS-202ENST00000319410 CFAP100Q494V2 611 aa11.55□□□□□ -0.56
KARS-202ENST00000319410 CAVIN4Q5BKX8 364 aa11.55□□□□□ -0.56
KARS-202ENST00000319410 MFSD14BQ5SR56 506 aa11.55□□□□□ -0.56
KARS-202ENST00000319410 VPS37DQ86XT2 251 aa11.55□□□□□ -0.56
KARS-202ENST00000319410 TDRD7Q8NHU6 1098 aaKnown RBP11.55□□□□□ -0.56
KARS-202ENST00000319410 PRMT6Q96LA8 375 aaPredicted RBP11.55□□□□□ -0.56
KARS-202ENST00000319410 DCTPP1Q9H773 170 aa11.55□□□□□ -0.56
KARS-202ENST00000319410 PCDHB15Q9Y5E8 787 aa11.55□□□□□ -0.56
KARS-202ENST00000319410 CCDC189A1A4V9 331 aa11.54□□□□□ -0.56
KARS-202ENST00000319410 BCAMP50895 628 aa11.54□□□□□ -0.56
KARS-202ENST00000319410 FKBP1AP62942 108 aaKnown RBP11.54□□□□□ -0.56
KARS-202ENST00000319410 KIF23Q02241 960 aaPredicted RBP11.54□□□□□ -0.56
KARS-202ENST00000319410 MKRN3Q13064 507 aaKnown RBP11.54□□□□□ -0.56
KARS-202ENST00000319410 ITFG2Q969R8 447 aa11.54□□□□□ -0.56
KARS-202ENST00000319410 ZBED3Q96IU2 234 aaPredicted RBP11.54□□□□□ -0.56
KARS-202ENST00000319410 GSCP56915 257 aaPredicted RBP11.54□□□□□ -0.56
KARS-202ENST00000319410 MUM1L1Q5H9M0 696 aa11.54□□□□□ -0.56
KARS-202ENST00000319410 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
KARS-202ENST00000319410 TNPO1Q92973 898 aaKnown RBP11.54□□□□□ -0.56
KARS-202ENST00000319410 KIF1BPQ96EK5 621 aa11.54□□□□□ -0.56
KARS-202ENST00000319410 VEZTQ9HBM0 779 aa11.54□□□□□ -0.56
KARS-202ENST00000319410 SEMA3EO15041 775 aa11.53□□□□□ -0.56
KARS-202ENST00000319410 LIG1P18858 919 aa11.53□□□□□ -0.56
KARS-202ENST00000319410 SWT1Q5T5J6 900 aaKnown RBP11.53□□□□□ -0.56
KARS-202ENST00000319410 TMX1Q9H3N1 280 aa11.53□□□□□ -0.56
KARS-202ENST00000319410 TTF2Q9UNY4 1162 aaKnown RBP11.53□□□□□ -0.56
KARS-202ENST00000319410 ARAP2Q8WZ64 1704 aa11.53□□□□□ -0.56
KARS-202ENST00000319410 FAM205AQ6ZU69 1335 aa11.53□□□□□ -0.56
KARS-202ENST00000319410 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.56
KARS-202ENST00000319410 SLC10A3P09131 477 aa11.52□□□□□ -0.56
KARS-202ENST00000319410 SPDYE6P0CI01 402 aa11.52□□□□□ -0.56
KARS-202ENST00000319410 RPAINQ86UA6 219 aa11.52□□□□□ -0.56
KARS-202ENST00000319410 RASAL3Q86YV0 1011 aa11.52□□□□□ -0.56
KARS-202ENST00000319410 CCDC102AQ96A19 550 aa11.52□□□□□ -0.56
KARS-202ENST00000319410 DEFB129Q9H1M3 183 aa11.52□□□□□ -0.56
KARS-202ENST00000319410 A0A1B0GUL7 405 aa11.52□□□□□ -0.57
KARS-202ENST00000319410 APOBEC3FQ8IUX4 373 aaKnown RBP11.52□□□□□ -0.57
KARS-202ENST00000319410 RHPN1Q8TCX5 695 aa11.52□□□□□ -0.57
KARS-202ENST00000319410 FAM210AQ96ND0 272 aa11.52□□□□□ -0.57
KARS-202ENST00000319410 TOMM22Q9NS69 142 aa11.52□□□□□ -0.57
KARS-202ENST00000319410 GNL3LQ9NVN8 582 aaKnown RBP11.52□□□□□ -0.57
KARS-202ENST00000319410 PAPPA2Q9BXP8 1791 aa11.52□□□□□ -0.57
KARS-202ENST00000319410 PDS5AQ29RF7 1337 aaKnown RBP11.52□□□□□ -0.57
KARS-202ENST00000319410 SEC24BO95487 1268 aa11.51□□□□□ -0.57
KARS-202ENST00000319410 TNNI3KQ59H18 835 aa11.51□□□□□ -0.57
KARS-202ENST00000319410 NOM1Q5C9Z4 860 aaKnown RBP11.51□□□□□ -0.57
KARS-202ENST00000319410 ZNF512BQ96KM6 892 aaPredicted RBP11.51□□□□□ -0.57
KARS-202ENST00000319410 NBPF3Q9H094 633 aa11.51□□□□□ -0.57
KARS-202ENST00000319410 RWDD1Q9H446 243 aaPredicted RBP11.51□□□□□ -0.57
KARS-202ENST00000319410 EXOC6BQ9Y2D4 811 aa11.51□□□□□ -0.57
KARS-202ENST00000319410 DDX49Q9Y6V7 483 aaKnown RBP11.51□□□□□ -0.57
KARS-202ENST00000319410 FPGT-TNNI3KV9GXZ4 949 aa11.51□□□□□ -0.57
KARS-202ENST00000319410 CASP8AP2Q9UKL3 1982 aa11.51□□□□□ -0.57
KARS-202ENST00000319410 MPHOSPH10O00566 681 aaKnown RBP11.51□□□□□ -0.57
KARS-202ENST00000319410 TRPA1O75762 1119 aa11.51□□□□□ -0.57
KARS-202ENST00000319410 ATP2B1P20020 1258 aa11.51□□□□□ -0.57
KARS-202ENST00000319410 HSCBQ8IWL3 235 aa11.51□□□□□ -0.57
KARS-202ENST00000319410 GCC1Q96CN9 775 aa11.51□□□□□ -0.57
KARS-202ENST00000319410 CSRNP1Q96S65 589 aa11.51□□□□□ -0.57
KARS-202ENST00000319410 TDRD3Q9H7E2 651 aaKnown RBP11.51□□□□□ -0.57
KARS-202ENST00000319410 SPTLC3Q9NUV7 552 aa11.51□□□□□ -0.57
KARS-202ENST00000319410 KLHL33A6NCF5 533 aa11.5□□□□□ -0.57
KARS-202ENST00000319410 NF2P35240 595 aa11.5□□□□□ -0.57
KARS-202ENST00000319410 CDAN1Q8IWY9 1227 aa11.5□□□□□ -0.57
KARS-202ENST00000319410 MTMR14Q8NCE2 650 aa11.5□□□□□ -0.57
KARS-202ENST00000319410 KIF18AQ8NI77 898 aa11.5□□□□□ -0.57
KARS-202ENST00000319410 XAGE2Q96GT9 111 aa11.5□□□□□ -0.57
KARS-202ENST00000319410 CALR3Q96L12 384 aaKnown RBP11.5□□□□□ -0.57
KARS-202ENST00000319410 PAIP2Q9BPZ3 127 aaKnown RBP11.5□□□□□ -0.57
KARS-202ENST00000319410 CWC15Q9P013 229 aaKnown RBP11.5□□□□□ -0.57
KARS-202ENST00000319410 ANGEL1Q9UNK9 670 aaKnown RBP11.5□□□□□ -0.57
KARS-202ENST00000319410 MYO1BO43795 1136 aa11.5□□□□□ -0.57
KARS-202ENST00000319410 DDIT3P35638 169 aa11.5□□□□□ -0.57
KARS-202ENST00000319410 TIMM10P62072 90 aa11.5□□□□□ -0.57
KARS-202ENST00000319410 FKBP1BP68106 108 aa11.5□□□□□ -0.57
KARS-202ENST00000319410 RAB3GAP1Q15042 981 aa11.5□□□□□ -0.57
KARS-202ENST00000319410 CLASRPQ8N2M8 674 aaKnown RBP11.5□□□□□ -0.57
KARS-202ENST00000319410 LRRCC1Q9C099 1032 aa11.5□□□□□ -0.57
KARS-202ENST00000319410 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.5□□□□□ -0.572e-6■□□□□ 9.3
KARS-202ENST00000319410 SSC5DA1L4H1 1573 aa11.5□□□□□ -0.57
KARS-202ENST00000319410 MYO1CO00159 1063 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 UQCRFS1P1P0C7P4 283 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 CRKP46108 304 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 CACNB3P54284 484 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 DNAJC21Q5F1R6 531 aaKnown RBP11.49□□□□□ -0.57
KARS-202ENST00000319410 NBPF12Q5TAG4 269 aaPredicted RBP11.49□□□□□ -0.57
KARS-202ENST00000319410 TXLNBQ8N3L3 684 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 TBC1D22AQ8WUA7 517 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 NOL10Q9BSC4 688 aaKnown RBP11.49□□□□□ -0.57
KARS-202ENST00000319410 RBSNQ9H1K0 784 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 SUGT1Q9Y2Z0 365 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 TCP10L2B9ZVM9 353 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 RASA3Q14644 834 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 CCDC102BQ68D86 513 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 DRC1Q96MC2 740 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 NEUROD6Q96NK8 337 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 RNF186Q9NXI6 227 aa11.49□□□□□ -0.57
KARS-202ENST00000319410 ZNF70Q9UC06 446 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms