RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 FHOD1Q9Y613 1164 aa19.81■□□□□ 0.76
SCAMP4-201ENST00000316097 COL1A1P02452 1464 aaPredicted RBP19.81■□□□□ 0.76
SCAMP4-201ENST00000316097 DPCR1Q3MIW9 517 aa19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 ARHGAP29Q52LW3 1261 aa19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 TICAM2Q86XR7 235 aa19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 STRBPQ96SI9 672 aaKnown RBP19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 RAI14Q9P0K7 980 aa19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 CALCOCO1Q9P1Z2 691 aa19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 UBR3Q6ZT12 1888 aa19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 COL24A1Q17RW2 1714 aa19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 A0A1B0GVL5 298 aa19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 ZRSR1Q15695 479 aaKnown RBP19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 CCDC93Q567U6 631 aa19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 MSL1Q68DK7 614 aa19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 MRPS27Q92552 414 aaKnown RBP19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 ZNF804BA4D1E1 1349 aa19.8■□□□□ 0.76
SCAMP4-201ENST00000316097 POLRMTO00411 1230 aaKnown RBP19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 CDK11BP21127 795 aaKnown RBP19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 IMMTQ16891 758 aaKnown RBP19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 DHX32Q7L7V1 743 aaKnown RBP19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 LCORLQ8N3X6 602 aa19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 NCOA5Q9HCD5 579 aaKnown RBP19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 PSDA5PKW4 1024 aaPredicted RBP19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 FMR1NBQ8N0W7 255 aaPredicted RBP19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 RPGRQ92834 1020 aaKnown RBP19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 NBPF3Q9H094 633 aa19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 PCDHA7Q9UN72 937 aa19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 ZNF213O14771 459 aa19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 GRAPQ13588 217 aa19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 ILDR1Q86SU0 546 aaPredicted RBP19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 HOMER1Q86YM7 354 aa19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 GRAPLQ8TC17 118 aaPredicted RBP19.79■□□□□ 0.76
SCAMP4-201ENST00000316097 PLSCR1O15162 318 aa19.78■□□□□ 0.76
SCAMP4-201ENST00000316097 PNMA6AP0CW24 399 aaPredicted RBP19.78■□□□□ 0.76
SCAMP4-201ENST00000316097 FAM193AP78312 1265 aa19.78■□□□□ 0.76
SCAMP4-201ENST00000316097 EXOSC10Q01780 885 aaKnown RBP19.78■□□□□ 0.76
SCAMP4-201ENST00000316097 GNL3LQ9NVN8 582 aaKnown RBP19.78■□□□□ 0.76
SCAMP4-201ENST00000316097 ST5P78524 1137 aa19.78■□□□□ 0.76
SCAMP4-201ENST00000316097 ATL3Q6DD88 541 aa19.78■□□□□ 0.76
SCAMP4-201ENST00000316097 FBXO33Q7Z6M2 555 aa19.78■□□□□ 0.76
SCAMP4-201ENST00000316097 BIN1O00499 593 aa19.77■□□□□ 0.76
SCAMP4-201ENST00000316097 CYP7A1P22680 504 aa19.77■□□□□ 0.76
SCAMP4-201ENST00000316097 HIBADHP31937 336 aaKnown RBP19.77■□□□□ 0.76
SCAMP4-201ENST00000316097 CYP2C19P33261 490 aa19.77■□□□□ 0.76
SCAMP4-201ENST00000316097 NDUFA8P51970 172 aa19.77■□□□□ 0.76
SCAMP4-201ENST00000316097 CREBRFQ8IUR6 639 aa19.77■□□□□ 0.76
SCAMP4-201ENST00000316097 AKT1S1Q96B36 256 aa19.77■□□□□ 0.76
SCAMP4-201ENST00000316097 EPB41L4AQ9HCS5 686 aaPredicted RBP19.77■□□□□ 0.76
SCAMP4-201ENST00000316097 KIAA1468Q9P260 1216 aa19.77■□□□□ 0.76
SCAMP4-201ENST00000316097 ARAP2Q8WZ64 1704 aa19.77■□□□□ 0.75
SCAMP4-201ENST00000316097 NRDCO43847 1150 aa19.77■□□□□ 0.75
SCAMP4-201ENST00000316097 RAB11FIP4Q86YS3 637 aa19.77■□□□□ 0.75
SCAMP4-201ENST00000316097 ZNF384Q8TF68 577 aa19.77■□□□□ 0.75
SCAMP4-201ENST00000316097 ANKRD2Q9GZV1 360 aa19.77■□□□□ 0.75
SCAMP4-201ENST00000316097 DNAI1Q9UI46 699 aa19.77■□□□□ 0.75
SCAMP4-201ENST00000316097 SMIM22K7EJ46 135 aa19.76■□□□□ 0.75
SCAMP4-201ENST00000316097 PLA2G4AP47712 749 aa19.76■□□□□ 0.75
SCAMP4-201ENST00000316097 TBC1D10CQ8IV04 446 aa19.76■□□□□ 0.75
SCAMP4-201ENST00000316097 MYH15Q9Y2K3 1946 aa19.76■□□□□ 0.75
SCAMP4-201ENST00000316097 CTDSPL2Q05D32 466 aa19.75■□□□□ 0.75
SCAMP4-201ENST00000316097 IFNL3Q8IZI9 196 aa19.75■□□□□ 0.75
SCAMP4-201ENST00000316097 SDR42E1Q8WUS8 393 aa19.75■□□□□ 0.75
SCAMP4-201ENST00000316097 UBXN4Q92575 508 aa19.75■□□□□ 0.75
SCAMP4-201ENST00000316097 VGLL3A8MV65 326 aa19.75■□□□□ 0.75
SCAMP4-201ENST00000316097 DYNLL1P63167 89 aaKnown RBP19.75■□□□□ 0.75
SCAMP4-201ENST00000316097 GPSM2P81274 684 aa19.75■□□□□ 0.75
SCAMP4-201ENST00000316097 SF3A1Q15459 793 aaKnown RBP19.75■□□□□ 0.75
SCAMP4-201ENST00000316097 ADALQ6DHV7 355 aa19.75■□□□□ 0.75
SCAMP4-201ENST00000316097 OLFM4Q6UX06 510 aa19.75■□□□□ 0.75
SCAMP4-201ENST00000316097 SLC4A4Q9Y6R1 1079 aa19.75■□□□□ 0.75
SCAMP4-201ENST00000316097 GSG1L2A8MUP6 293 aa19.74■□□□□ 0.75
SCAMP4-201ENST00000316097 HMGB1P09429 215 aaKnown RBP19.74■□□□□ 0.75
SCAMP4-201ENST00000316097 KCNJ6P48051 423 aa19.74■□□□□ 0.75
SCAMP4-201ENST00000316097 TMCO3Q6UWJ1 677 aa19.74■□□□□ 0.75
SCAMP4-201ENST00000316097 PATL2C9JE40 543 aaKnown RBP19.74■□□□□ 0.75
SCAMP4-201ENST00000316097 PRDX5P30044 214 aa19.74■□□□□ 0.75
SCAMP4-201ENST00000316097 ETF1P62495 437 aaKnown RBP19.74■□□□□ 0.75
SCAMP4-201ENST00000316097 TPM4P67936 248 aa19.74■□□□□ 0.75
SCAMP4-201ENST00000316097 CRY2Q49AN0 593 aa19.74■□□□□ 0.75
SCAMP4-201ENST00000316097 ARGLU1Q9NWB6 273 aaPredicted RBP19.74■□□□□ 0.75
SCAMP4-201ENST00000316097 TACC3Q9Y6A5 838 aa19.74■□□□□ 0.75
SCAMP4-201ENST00000316097 MYH7P12883 1935 aa19.74■□□□□ 0.75
SCAMP4-201ENST00000316097 SALL1Q9NSC2 1324 aa19.74■□□□□ 0.75
SCAMP4-201ENST00000316097 ANTXR2P58335 489 aa19.73■□□□□ 0.75
SCAMP4-201ENST00000316097 EN1Q05925 392 aaPredicted RBP19.73■□□□□ 0.75
SCAMP4-201ENST00000316097 STK38Q15208 465 aa19.73■□□□□ 0.75
SCAMP4-201ENST00000316097 TRERF1Q96PN7 1200 aa19.73■□□□□ 0.75
SCAMP4-201ENST00000316097 BPIFA3Q9BQP9 254 aa19.73■□□□□ 0.75
SCAMP4-201ENST00000316097 ORC3Q9UBD5 711 aaPredicted RBP19.73■□□□□ 0.75
SCAMP4-201ENST00000316097 LMOD1P29536 600 aaPredicted RBP19.73■□□□□ 0.75
SCAMP4-201ENST00000316097 MNS1Q8NEH6 495 aa19.73■□□□□ 0.75
SCAMP4-201ENST00000316097 RTEL1Q9NZ71 1219 aa19.73■□□□□ 0.75
SCAMP4-201ENST00000316097 POLR3GO15318 223 aaPredicted RBP19.72■□□□□ 0.75
SCAMP4-201ENST00000316097 PRC1O43663 620 aa19.72■□□□□ 0.75
SCAMP4-201ENST00000316097 ZRANB2O95218 330 aaKnown RBP eCLIP19.72■□□□□ 0.75
SCAMP4-201ENST00000316097 HNRNPH2P55795 449 aaKnown RBP19.72■□□□□ 0.75
SCAMP4-201ENST00000316097 EZH2Q15910 746 aaKnown RBP19.72■□□□□ 0.75
SCAMP4-201ENST00000316097 OTUD7BQ6GQQ9 843 aa19.72■□□□□ 0.75
SCAMP4-201ENST00000316097 NAPBQ9H115 298 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms