RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 GTF2A2P52657 109 aa23.81■■□□□ 1.4
VEGFB-201ENST00000309422 NOL9Q5SY16 702 aaKnown RBP23.81■■□□□ 1.4
VEGFB-201ENST00000309422 RILPL2Q969X0 211 aa23.81■■□□□ 1.4
VEGFB-201ENST00000309422 ZNF112Q9UJU3 913 aa23.81■■□□□ 1.4
VEGFB-201ENST00000309422 SNCAIPQ9Y6H5 919 aa23.81■■□□□ 1.4
VEGFB-201ENST00000309422 CTNND1O60716 968 aaKnown RBP23.8■■□□□ 1.4
VEGFB-201ENST00000309422 ALDH1A1P00352 501 aa23.8■■□□□ 1.4
VEGFB-201ENST00000309422 PPATQ06203 517 aa23.8■■□□□ 1.4
VEGFB-201ENST00000309422 PPIL2Q13356 520 aa23.8■■□□□ 1.4
VEGFB-201ENST00000309422 SLC4A8Q2Y0W8 1093 aa23.8■■□□□ 1.4
VEGFB-201ENST00000309422 TICAM2Q86XR7 235 aa23.8■■□□□ 1.4
VEGFB-201ENST00000309422 SDR42E1Q8WUS8 393 aa23.8■■□□□ 1.4
VEGFB-201ENST00000309422 SAGE1Q9NXZ1 904 aa23.8■■□□□ 1.4
VEGFB-201ENST00000309422 SERPINB13Q9UIV8 391 aa23.8■■□□□ 1.4
VEGFB-201ENST00000309422 CENPQQ7L2Z9 268 aaPredicted RBP23.79■■□□□ 1.4
VEGFB-201ENST00000309422 SNAPC2Q13487 334 aa23.78■■□□□ 1.4
VEGFB-201ENST00000309422 CCDC136Q96JN2 1154 aa23.78■■□□□ 1.4
VEGFB-201ENST00000309422 NACAP1Q9BZK3 213 aa23.78■■□□□ 1.4
VEGFB-201ENST00000309422 PUS7LQ9H0K6 701 aaKnown RBP23.78■■□□□ 1.4
VEGFB-201ENST00000309422 EHD4Q9H223 541 aa23.78■■□□□ 1.4
VEGFB-201ENST00000309422 OSBPL3Q9H4L5 887 aa23.78■■□□□ 1.4
VEGFB-201ENST00000309422 MYO5AQ9Y4I1 1855 aaKnown RBP23.78■■□□□ 1.4
VEGFB-201ENST00000309422 APPP05067 770 aa23.78■■□□□ 1.4
VEGFB-201ENST00000309422 MAP3K10Q02779 954 aa23.78■■□□□ 1.4
VEGFB-201ENST00000309422 PLEKHM2Q8IWE5 1019 aa23.78■■□□□ 1.4
VEGFB-201ENST00000309422 ZIC5Q96T25 663 aa23.78■■□□□ 1.4
VEGFB-201ENST00000309422 TBC1D2Q9BYX2 928 aa23.78■■□□□ 1.4
VEGFB-201ENST00000309422 DCP1AQ9NPI6 582 aaPredicted RBP23.78■■□□□ 1.4
VEGFB-201ENST00000309422 TAOK2Q9UL54 1235 aa23.78■■□□□ 1.4
VEGFB-201ENST00000309422 FAM196BA6NMK8 535 aa23.77■■□□□ 1.4
VEGFB-201ENST00000309422 HIP1O00291 1037 aa23.77■■□□□ 1.4
VEGFB-201ENST00000309422 GPAA1O43292 621 aa23.77■■□□□ 1.4
VEGFB-201ENST00000309422 CETPP11597 493 aa23.77■■□□□ 1.4
VEGFB-201ENST00000309422 AS3MTQ9HBK9 375 aa23.77■■□□□ 1.4
VEGFB-201ENST00000309422 GINM1Q9NU53 330 aa23.77■■□□□ 1.4
VEGFB-201ENST00000309422 ARPP21Q9UBL0 812 aaPredicted RBP23.77■■□□□ 1.4
VEGFB-201ENST00000309422 OTOFQ9HC10 1997 aa23.77■■□□□ 1.39
VEGFB-201ENST00000309422 CCL15-CCL14A0A0B4J2E2 113 aa23.76■■□□□ 1.39
VEGFB-201ENST00000309422 FOXN1O15353 648 aa23.76■■□□□ 1.39
VEGFB-201ENST00000309422 ASNSP08243 561 aa23.76■■□□□ 1.39
VEGFB-201ENST00000309422 TDO2P48775 406 aa23.76■■□□□ 1.39
VEGFB-201ENST00000309422 CCL15Q16663 113 aa23.76■■□□□ 1.39
VEGFB-201ENST00000309422 SLFNL1Q499Z3 407 aa23.76■■□□□ 1.39
VEGFB-201ENST00000309422 PHF20L1A8MW92 1017 aa23.75■■□□□ 1.39
VEGFB-201ENST00000309422 TM4SF4P48230 202 aa23.75■■□□□ 1.39
VEGFB-201ENST00000309422 MFAP1P55081 439 aaKnown RBP23.75■■□□□ 1.39
VEGFB-201ENST00000309422 OSBP2Q969R2 916 aa23.75■■□□□ 1.39
VEGFB-201ENST00000309422 ZHX2Q9Y6X8 837 aa23.75■■□□□ 1.39
VEGFB-201ENST00000309422 MYH7P12883 1935 aa23.74■■□□□ 1.39
VEGFB-201ENST00000309422 NAV1Q8NEY1 1877 aa23.74■■□□□ 1.39
VEGFB-201ENST00000309422 TRPA1O75762 1119 aa23.74■■□□□ 1.39
VEGFB-201ENST00000309422 GIMAP6Q6P9H5 292 aa23.74■■□□□ 1.39
VEGFB-201ENST00000309422 CNKSR2Q8WXI2 1034 aa23.74■■□□□ 1.39
VEGFB-201ENST00000309422 STRBPQ96SI9 672 aaKnown RBP23.74■■□□□ 1.39
VEGFB-201ENST00000309422 CABP5Q9NP86 173 aa23.74■■□□□ 1.39
VEGFB-201ENST00000309422 DIAPH3Q9NSV4 1193 aa23.74■■□□□ 1.39
VEGFB-201ENST00000309422 RNF186Q9NXI6 227 aa23.74■■□□□ 1.39
VEGFB-201ENST00000309422 SWAP70Q9UH65 585 aa23.74■■□□□ 1.39
VEGFB-201ENST00000309422 FOCADQ5VW36 1801 aa23.73■■□□□ 1.39
VEGFB-201ENST00000309422 IRF6O14896 467 aa23.73■■□□□ 1.39
VEGFB-201ENST00000309422 CAP2P40123 477 aa23.73■■□□□ 1.39
VEGFB-201ENST00000309422 ZMYM1Q5SVZ6 1142 aa23.73■■□□□ 1.39
VEGFB-201ENST00000309422 HELLSQ9NRZ9 838 aa23.73■■□□□ 1.39
VEGFB-201ENST00000309422 PRKAB2O43741 272 aa23.72■■□□□ 1.39
VEGFB-201ENST00000309422 CHGBP05060 677 aa23.72■■□□□ 1.39
VEGFB-201ENST00000309422 PTPRAP18433 802 aa23.72■■□□□ 1.39
VEGFB-201ENST00000309422 GJA5P36382 358 aa23.72■■□□□ 1.39
VEGFB-201ENST00000309422 METTL16Q86W50 562 aaKnown RBP23.72■■□□□ 1.39
VEGFB-201ENST00000309422 IFNL1Q8IU54 200 aa23.72■■□□□ 1.39
VEGFB-201ENST00000309422 ZNF287Q9HBT7 754 aa23.72■■□□□ 1.39
VEGFB-201ENST00000309422 M0R2C6 588 aa23.71■■□□□ 1.39
VEGFB-201ENST00000309422 CXCL11O14625 94 aa23.71■■□□□ 1.39
VEGFB-201ENST00000309422 SLC3A2P08195 630 aaKnown RBP23.71■■□□□ 1.39
VEGFB-201ENST00000309422 HSPA8P11142 646 aaKnown RBP23.71■■□□□ 1.39
VEGFB-201ENST00000309422 CERKLQ49MI3 558 aaPredicted RBP23.71■■□□□ 1.39
VEGFB-201ENST00000309422 NAPBQ9H115 298 aa23.71■■□□□ 1.39
VEGFB-201ENST00000309422 USP17L5A8MUK1 530 aa23.7■■□□□ 1.38
VEGFB-201ENST00000309422 LBX1P52954 281 aa23.7■■□□□ 1.38
VEGFB-201ENST00000309422 FASTKD5Q7L8L6 764 aaKnown RBP23.7■■□□□ 1.38
VEGFB-201ENST00000309422 PRDM10Q9NQV6 1147 aa23.7■■□□□ 1.38
VEGFB-201ENST00000309422 TSKSQ9UJT2 592 aa23.7■■□□□ 1.38
VEGFB-201ENST00000309422 TRIM75PA6NK02 468 aa23.69■■□□□ 1.38
VEGFB-201ENST00000309422 USP17L12C9JPN9 530 aa23.69■■□□□ 1.38
VEGFB-201ENST00000309422 USP17L21D6R901 530 aa23.69■■□□□ 1.38
VEGFB-201ENST00000309422 MPHOSPH10O00566 681 aaKnown RBP23.69■■□□□ 1.38
VEGFB-201ENST00000309422 GDF11O95390 407 aa23.69■■□□□ 1.38
VEGFB-201ENST00000309422 PLCD1P51178 756 aa23.69■■□□□ 1.38
VEGFB-201ENST00000309422 MCMDC2Q4G0Z9 681 aa23.69■■□□□ 1.38
VEGFB-201ENST00000309422 ZBTB21Q9ULJ3 1066 aa23.69■■□□□ 1.38
VEGFB-201ENST00000309422 KCNH4Q9UQ05 1017 aa23.69■■□□□ 1.38
VEGFB-201ENST00000309422 TESPA1A2RU30 521 aaPredicted RBP23.68■■□□□ 1.38
VEGFB-201ENST00000309422 PATL2C9JE40 543 aaKnown RBP23.68■■□□□ 1.38
VEGFB-201ENST00000309422 ABCB5Q2M3G0 1257 aa23.68■■□□□ 1.38
VEGFB-201ENST00000309422 TTC22Q5TAA0 569 aa23.68■■□□□ 1.38
VEGFB-201ENST00000309422 ERICH6BQ5W0A0 696 aa23.68■■□□□ 1.38
VEGFB-201ENST00000309422 ZNF280CQ8ND82 737 aa23.68■■□□□ 1.38
VEGFB-201ENST00000309422 DNAJC18Q9H819 358 aa23.68■■□□□ 1.38
VEGFB-201ENST00000309422 ZCCHC17Q9NP64 241 aaKnown RBP23.68■■□□□ 1.38
VEGFB-201ENST00000309422 DOCK1Q14185 1865 aa23.68■■□□□ 1.38
VEGFB-201ENST00000309422 PCNTO95613 3336 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms