RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 CDC27P30260 824 aa12.36□□□□□ -0.43
CLP1-201ENST00000302731 IARSP41252 1262 aaKnown RBP12.36□□□□□ -0.43
CLP1-201ENST00000302731 USP5P45974 858 aa12.36□□□□□ -0.43
CLP1-201ENST00000302731 PODNQ7Z5L7 613 aa12.36□□□□□ -0.43
CLP1-201ENST00000302731 TTC6Q86TZ1 520 aa12.36□□□□□ -0.43
CLP1-201ENST00000302731 SH3RF3Q8TEJ3 882 aaPredicted RBP12.36□□□□□ -0.43
CLP1-201ENST00000302731 SLC16A10Q8TF71 515 aa12.36□□□□□ -0.43
CLP1-201ENST00000302731 WASF1Q92558 559 aa12.36□□□□□ -0.43
CLP1-201ENST00000302731 ZNF396Q96N95 335 aaPredicted RBP12.36□□□□□ -0.43
CLP1-201ENST00000302731 CYP2D7A0A087X1C5 515 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 LETM1O95202 739 aaPredicted RBP12.35□□□□□ -0.43
CLP1-201ENST00000302731 CALM1P0DP23 149 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 CALM2P0DP24 149 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 CALM3P0DP25 149 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 BTDP43251 543 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 FKBP1AP62942 108 aaKnown RBP12.35□□□□□ -0.43
CLP1-201ENST00000302731 GTF2IP78347 998 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 RTN1Q16799 776 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 GRIPAP1Q4V328 841 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 CCDC178Q5BJE1 867 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 BRAPQ7Z569 592 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 ZNF654Q8IZM8 581 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 LEO1Q8WVC0 666 aaPredicted RBP12.35□□□□□ -0.43
CLP1-201ENST00000302731 SPATA32Q96LK8 384 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 GRPEL1Q9HAV7 217 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 MYH15Q9Y2K3 1946 aa12.35□□□□□ -0.43
CLP1-201ENST00000302731 RANBP6O60518 1105 aaKnown RBP12.34□□□□□ -0.43
CLP1-201ENST00000302731 DDAH1O94760 285 aa12.34□□□□□ -0.43
CLP1-201ENST00000302731 FMNL1O95466 1100 aaPredicted RBP12.34□□□□□ -0.43
CLP1-201ENST00000302731 CCDC183Q5T5S1 534 aa12.34□□□□□ -0.43
CLP1-201ENST00000302731 IFIT1BQ5T764 474 aaKnown RBP12.34□□□□□ -0.43
CLP1-201ENST00000302731 FAM173BQ6P4H8 233 aa12.34□□□□□ -0.43
CLP1-201ENST00000302731 GAS2L3Q86XJ1 694 aa12.34□□□□□ -0.43
CLP1-201ENST00000302731 RAB11FIP4Q86YS3 637 aa12.34□□□□□ -0.43
CLP1-201ENST00000302731 ENAHQ8N8S7 591 aaPredicted RBP12.34□□□□□ -0.43
CLP1-201ENST00000302731 FANCBQ8NB91 859 aa12.34□□□□□ -0.43
CLP1-201ENST00000302731 ZKSCAN3Q9BRR0 538 aa12.34□□□□□ -0.43
CLP1-201ENST00000302731 ZNF287Q9HBT7 754 aa12.34□□□□□ -0.43
CLP1-201ENST00000302731 RBM28Q9NW13 759 aaKnown RBP12.34□□□□□ -0.43
CLP1-201ENST00000302731 RBM27Q9P2N5 1060 aaKnown RBP12.34□□□□□ -0.43
CLP1-201ENST00000302731 NAV1Q8NEY1 1877 aa12.34□□□□□ -0.43
CLP1-201ENST00000302731 C10orf71Q711Q0 1435 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 SMIM22K7EJ46 135 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 RIMBP2O15034 1052 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 RXRAP19793 462 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 RHBDL3P58872 404 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 SSRP1Q08945 709 aaKnown RBP12.33□□□□□ -0.43
CLP1-201ENST00000302731 LRSAM1Q6UWE0 723 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 CATIPQ7Z7H3 387 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 TRIM22Q8IYM9 498 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 TGFBRAP1Q8WUH2 860 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 C7orf43Q8WVR3 580 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 ANKS1AQ92625 1134 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 ALG1Q9BT22 464 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 MRIQ9BWK5 157 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 RCOR1Q9UKL0 485 aa12.33□□□□□ -0.43
CLP1-201ENST00000302731 DDX60LQ5H9U9 1706 aaKnown RBP12.33□□□□□ -0.44
CLP1-201ENST00000302731 SNED1Q8TER0 1413 aa12.33□□□□□ -0.44
CLP1-201ENST00000302731 PRDM1O75626 825 aa12.33□□□□□ -0.44
CLP1-201ENST00000302731 USP17L8P0C7I0 530 aa12.33□□□□□ -0.44
CLP1-201ENST00000302731 XRCC6P12956 609 aaKnown RBP eCLIP12.33□□□□□ -0.44
CLP1-201ENST00000302731 DGKHQ86XP1 1220 aa12.33□□□□□ -0.44
CLP1-201ENST00000302731 TEX11Q8IYF3 940 aa12.33□□□□□ -0.44
CLP1-201ENST00000302731 STK11IPQ8N1F8 1099 aa12.33□□□□□ -0.44
CLP1-201ENST00000302731 SUPT20HQ8NEM7 779 aa12.33□□□□□ -0.44
CLP1-201ENST00000302731 MYL10Q9BUA6 226 aa12.33□□□□□ -0.44
CLP1-201ENST00000302731 RNF26Q9BY78 433 aaPredicted RBP12.33□□□□□ -0.44
CLP1-201ENST00000302731 TCP11L1Q9NUJ3 509 aa12.33□□□□□ -0.44
CLP1-201ENST00000302731 SLX4Q8IY92 1834 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 CDK5RAP2Q96SN8 1893 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 TSPY2A6NKD2 308 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 G3V3G9 751 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 DEXIO95424 95 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 CYP2D6P10635 497 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 TROAPQ12815 778 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 DCAF8Q5TAQ9 597 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 HHIPL2Q6UWX4 724 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 OLFM4Q6UX06 510 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 ILDR1Q86SU0 546 aaPredicted RBP12.32□□□□□ -0.44
CLP1-201ENST00000302731 NBPF11Q86T75 865 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 CCDC125Q86Z20 511 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 CRACR2BQ8N4Y2 399 aaPredicted RBP12.32□□□□□ -0.44
CLP1-201ENST00000302731 MAP3K14Q99558 947 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 TFIP11Q9UBB9 837 aaKnown RBP12.32□□□□□ -0.44
CLP1-201ENST00000302731 DAGLAQ9Y4D2 1042 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 FOCADQ5VW36 1801 aa12.32□□□□□ -0.44
CLP1-201ENST00000302731 FLT1P17948 1338 aa12.31□□□□□ -0.44
CLP1-201ENST00000302731 GOLGA6L4A6NEF3 574 aa12.31□□□□□ -0.44
CLP1-201ENST00000302731 POLR3DP05423 398 aaPredicted RBP12.31□□□□□ -0.44
CLP1-201ENST00000302731 HDLBPQ00341 1268 aaKnown RBP12.31□□□□□ -0.44
CLP1-201ENST00000302731 GUCY1B3Q02153 619 aa12.31□□□□□ -0.44
CLP1-201ENST00000302731 KIF23Q02241 960 aaPredicted RBP12.31□□□□□ -0.44
CLP1-201ENST00000302731 TRIM29Q14134 588 aa12.31□□□□□ -0.44
CLP1-201ENST00000302731 STRIP1Q5VSL9 837 aa12.31□□□□□ -0.44
CLP1-201ENST00000302731 CCDC144CPQ8IYA2 1237 aa12.31□□□□□ -0.44
CLP1-201ENST00000302731 CERS5Q8N5B7 392 aa12.31□□□□□ -0.44
CLP1-201ENST00000302731 PHKBQ93100 1093 aa12.31□□□□□ -0.44
CLP1-201ENST00000302731 SLC26A6Q9BXS9 759 aa12.31□□□□□ -0.44
CLP1-201ENST00000302731 POLR3EQ9NVU0 708 aa12.31□□□□□ -0.44
CLP1-201ENST00000302731 RTEL1Q9NZ71 1219 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms