RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 SECISBP2LQ93073 1101 aaKnown RBP13.78□□□□□ -0.2
ABCA3-201ENST00000301732 MRPS25P82663 173 aaKnown RBP13.78□□□□□ -0.2
ABCA3-201ENST00000301732 CNGA4Q8IV77 575 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 PHF8Q9UPP1 1060 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 KRT19P08727 400 aa13.77□□□□□ -0.2
ABCA3-201ENST00000301732 MYCLP12524 364 aaPredicted RBP13.77□□□□□ -0.2
ABCA3-201ENST00000301732 PRPHP41219 470 aa13.77□□□□□ -0.2
ABCA3-201ENST00000301732 SV2BQ7L1I2 683 aa13.77□□□□□ -0.2
ABCA3-201ENST00000301732 ANO3Q9BYT9 981 aa13.77□□□□□ -0.2
ABCA3-201ENST00000301732 VCX3BQ9H321 246 aa13.77□□□□□ -0.2
ABCA3-201ENST00000301732 RNF113AO15541 343 aaKnown RBP13.77□□□□□ -0.2
ABCA3-201ENST00000301732 POLD1P28340 1107 aa13.77□□□□□ -0.2
ABCA3-201ENST00000301732 PYM1Q9BRP8 204 aaKnown RBP13.77□□□□□ -0.2
ABCA3-201ENST00000301732 XAB2Q9HCS7 855 aaKnown RBP13.77□□□□□ -0.2
ABCA3-201ENST00000301732 TAF5LO75529 589 aa13.77□□□□□ -0.21
ABCA3-201ENST00000301732 CAVIN2O95810 425 aa13.77□□□□□ -0.21
ABCA3-201ENST00000301732 B4GALNT4Q76KP1 1039 aa13.77□□□□□ -0.21
ABCA3-201ENST00000301732 MYRIPQ8NFW9 859 aa13.77□□□□□ -0.21
ABCA3-201ENST00000301732 FNBP1Q96RU3 617 aa13.77□□□□□ -0.21
ABCA3-201ENST00000301732 SNRPA1P09661 255 aaKnown RBP13.77□□□□□ -0.21
ABCA3-201ENST00000301732 CTAGE3PQ8IX95 158 aa13.77□□□□□ -0.21
ABCA3-201ENST00000301732 STAC3Q96MF2 364 aa13.77□□□□□ -0.21
ABCA3-201ENST00000301732 CYP26C1Q6V0L0 522 aa13.77□□□□□ -0.21
ABCA3-201ENST00000301732 ANKRD13CQ8N6S4 541 aa13.77□□□□□ -0.21
ABCA3-201ENST00000301732 TMEM63CQ9P1W3 806 aa13.77□□□□□ -0.21
ABCA3-201ENST00000301732 NCKAP5LQ9HCH0 1330 aa13.77□□□□□ -0.21
ABCA3-201ENST00000301732 LDHCP07864 332 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 ALDH3A1P30838 453 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 IFRD2Q12894 506 aaPredicted RBP13.76□□□□□ -0.21
ABCA3-201ENST00000301732 E2F4Q16254 413 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 CCDC62Q6P9F0 684 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 KRT28Q7Z3Y7 464 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 MSH6P52701 1360 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 ARFGAP2Q8N6H7 521 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 IQUBQ8NA54 791 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 XPO4Q9C0E2 1151 aaKnown RBP13.76□□□□□ -0.21
ABCA3-201ENST00000301732 PLEKHH2Q8IVE3 1493 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 IFNAR2P48551 515 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 RRAGAQ7L523 313 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 DHX32Q7L7V1 743 aaKnown RBP13.76□□□□□ -0.21
ABCA3-201ENST00000301732 IFNB1P01574 187 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 SMC5Q8IY18 1101 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 IFT74Q96LB3 600 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 NFE2L3Q9Y4A8 694 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 ENC1O14682 589 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 ZNF202O95125 648 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 EPB41P11171 864 aaKnown RBP13.76□□□□□ -0.21
ABCA3-201ENST00000301732 SNX21Q969T3 373 aa13.76□□□□□ -0.21
ABCA3-201ENST00000301732 SPECC1L-ADORA2AF8WAN1 911 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 FAM89AQ96GI7 184 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 NRBP1Q9UHY1 535 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 ELP1O95163 1332 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 SLC27A2O14975 620 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 GAS8O95995 478 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 IFNL2Q8IZJ0 200 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 RNF10Q8N5U6 811 aaKnown RBP13.75□□□□□ -0.21
ABCA3-201ENST00000301732 CNNM2Q9H8M5 875 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 EFCC1Q9HA90 598 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 INTUQ9ULD6 942 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 PTPN22Q9Y2R2 807 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 ACEP12821 1306 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 WASLO00401 505 aaPredicted RBP13.75□□□□□ -0.21
ABCA3-201ENST00000301732 KAZNQ674X7 775 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 MTHFSDQ2M296 383 aaKnown RBP13.75□□□□□ -0.21
ABCA3-201ENST00000301732 TSGA10Q9BZW7 698 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 CASKIN1Q8WXD9 1431 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 ABTB1Q969K4 478 aaPredicted RBP13.75□□□□□ -0.21
ABCA3-201ENST00000301732 PHACTR3Q96KR7 559 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 CDK13Q14004 1512 aaKnown RBP13.75□□□□□ -0.21
ABCA3-201ENST00000301732 UQCRFS1P1P0C7P4 283 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 GYS2P54840 703 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 TCP10Q12799 353 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 CCDC38Q502W7 563 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 ANO1Q5XXA6 986 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 C2CD5Q86YS7 1000 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 RMDN2Q96LZ7 410 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 SETDB2Q96T68 719 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 SNX14Q9Y5W7 946 aa13.75□□□□□ -0.21
ABCA3-201ENST00000301732 DAPK1P53355 1430 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 SYNJ2BP-COX16A0A087WUM0 186 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 PHLDB2Q86SQ0 1253 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 NELFBQ8WX92 580 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 COX16Q9P0S2 106 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 CCT5P48643 541 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 IFT20Q8IY31 132 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 DDX12PQ92771 950 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 TFCP2L1Q9NZI6 479 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 HFM1A2PYH4 1435 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 CASP2P42575 452 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 RBM28Q9NW13 759 aaKnown RBP13.74□□□□□ -0.21
ABCA3-201ENST00000301732 SEPT10Q9P0V9 454 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 FAM47AQ5JRC9 791 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 GPR161Q8N6U8 529 aaKnown RBP13.74□□□□□ -0.21
ABCA3-201ENST00000301732 THOC1Q96FV9 657 aaKnown RBP13.74□□□□□ -0.21
ABCA3-201ENST00000301732 GBP5Q96PP8 586 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 ANLNQ9NQW6 1124 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 NR1I2O75469 434 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 GCNT3O95395 438 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 LONRF2Q1L5Z9 754 aa13.74□□□□□ -0.21
ABCA3-201ENST00000301732 PRR16Q569H4 304 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms