RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 MS4A4AQ96JQ5 239 aa21.99■■□□□ 1.11
SPSB3-201ENST00000301717 CRNKL1Q9BZJ0 848 aaKnown RBP21.99■■□□□ 1.11
SPSB3-201ENST00000301717 PI4KBQ9UBF8 816 aa21.99■■□□□ 1.11
SPSB3-201ENST00000301717 FOCADQ5VW36 1801 aa21.99■■□□□ 1.11
SPSB3-201ENST00000301717 CYP2D6P10635 497 aa21.98■■□□□ 1.11
SPSB3-201ENST00000301717 NOL9Q5SY16 702 aaKnown RBP21.98■■□□□ 1.11
SPSB3-201ENST00000301717 TMED8Q6PL24 325 aaPredicted RBP21.98■■□□□ 1.11
SPSB3-201ENST00000301717 PTPN18Q99952 460 aa21.98■■□□□ 1.11
SPSB3-201ENST00000301717 FSD1Q9BTV5 496 aa21.98■■□□□ 1.11
SPSB3-201ENST00000301717 DHX36Q9H2U1 1008 aaKnown RBP21.98■■□□□ 1.11
SPSB3-201ENST00000301717 MANSC4A6NHS7 340 aaPredicted RBP21.97■■□□□ 1.11
SPSB3-201ENST00000301717 SMIM22K7EJ46 135 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 RNF113AO15541 343 aaKnown RBP21.97■■□□□ 1.11
SPSB3-201ENST00000301717 TBC1D12O60347 775 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 TBC1D8O95759 1140 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 PLCD1P51178 756 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 JAG1P78504 1218 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 SREBF2Q12772 1141 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 ZSCAN25Q6NSZ9 544 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 PLEKHM2Q8IWE5 1019 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 SCYL3Q8IZE3 742 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 BRI3BPQ8WY22 251 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 SEC62Q99442 399 aaKnown RBP21.97■■□□□ 1.11
SPSB3-201ENST00000301717 R3HDMLQ9H3Y0 253 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 M0R2C6 588 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 PDE4AP27815 886 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 CERS3Q8IU89 383 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 DCP1AQ9NPI6 582 aaPredicted RBP21.97■■□□□ 1.11
SPSB3-201ENST00000301717 MCM9Q9NXL9 1143 aa21.97■■□□□ 1.11
SPSB3-201ENST00000301717 CCL15-CCL14A0A0B4J2E2 113 aa21.96■■□□□ 1.11
SPSB3-201ENST00000301717 PPIL2Q13356 520 aa21.96■■□□□ 1.11
SPSB3-201ENST00000301717 CCL15Q16663 113 aa21.96■■□□□ 1.11
SPSB3-201ENST00000301717 IFNL1Q8IU54 200 aa21.96■■□□□ 1.11
SPSB3-201ENST00000301717 CRACR2BQ8N4Y2 399 aaPredicted RBP21.96■■□□□ 1.11
SPSB3-201ENST00000301717 APPBP2Q92624 585 aa21.96■■□□□ 1.11
SPSB3-201ENST00000301717 MYH7P12883 1935 aa21.95■■□□□ 1.1
SPSB3-201ENST00000301717 CYP2D7A0A087X1C5 515 aa21.95■■□□□ 1.1
SPSB3-201ENST00000301717 CA12O43570 354 aa21.95■■□□□ 1.1
SPSB3-201ENST00000301717 GDF11O95390 407 aa21.95■■□□□ 1.1
SPSB3-201ENST00000301717 PTPRAP18433 802 aa21.95■■□□□ 1.1
SPSB3-201ENST00000301717 PPATQ06203 517 aa21.95■■□□□ 1.1
SPSB3-201ENST00000301717 PICK1Q9NRD5 415 aa21.95■■□□□ 1.1
SPSB3-201ENST00000301717 SLC4A4Q9Y6R1 1079 aa21.95■■□□□ 1.1
SPSB3-201ENST00000301717 DDX60LQ5H9U9 1706 aaKnown RBP21.94■■□□□ 1.1
SPSB3-201ENST00000301717 CTNND1O60716 968 aaKnown RBP21.94■■□□□ 1.1
SPSB3-201ENST00000301717 POLR3DP05423 398 aaPredicted RBP21.94■■□□□ 1.1
SPSB3-201ENST00000301717 HLA-DOAP06340 250 aa21.94■■□□□ 1.1
SPSB3-201ENST00000301717 METTL16Q86W50 562 aaKnown RBP21.94■■□□□ 1.1
SPSB3-201ENST00000301717 REM2Q8IYK8 340 aaPredicted RBP21.94■■□□□ 1.1
SPSB3-201ENST00000301717 SAGE1Q9NXZ1 904 aa21.94■■□□□ 1.1
SPSB3-201ENST00000301717 HERC5Q9UII4 1024 aaKnown RBP21.94■■□□□ 1.1
SPSB3-201ENST00000301717 ZHX2Q9Y6X8 837 aa21.94■■□□□ 1.1
SPSB3-201ENST00000301717 TESPA1A2RU30 521 aaPredicted RBP21.93■■□□□ 1.1
SPSB3-201ENST00000301717 GTF2A2P52657 109 aa21.93■■□□□ 1.1
SPSB3-201ENST00000301717 FAM43AQ8N2R8 423 aa21.93■■□□□ 1.1
SPSB3-201ENST00000301717 STRBPQ96SI9 672 aaKnown RBP21.93■■□□□ 1.1
SPSB3-201ENST00000301717 TRIM34Q9BYJ4 488 aa21.93■■□□□ 1.1
SPSB3-201ENST00000301717 NAV1Q8NEY1 1877 aa21.93■■□□□ 1.1
SPSB3-201ENST00000301717 MYH1P12882 1939 aa21.93■■□□□ 1.1
SPSB3-201ENST00000301717 GPAA1O43292 621 aa21.92■■□□□ 1.1
SPSB3-201ENST00000301717 CAP2P40123 477 aa21.92■■□□□ 1.1
SPSB3-201ENST00000301717 FOXP4Q8IVH2 680 aaPredicted RBP21.92■■□□□ 1.1
SPSB3-201ENST00000301717 ZFYP08048 801 aaPredicted RBP21.91■■□□□ 1.1
SPSB3-201ENST00000301717 INHBEP58166 350 aa21.91■■□□□ 1.1
SPSB3-201ENST00000301717 SNAPC2Q13487 334 aa21.91■■□□□ 1.1
SPSB3-201ENST00000301717 CCDC129Q6ZRS4 1044 aa21.91■■□□□ 1.1
SPSB3-201ENST00000301717 SLC44A5Q8NCS7 719 aa21.91■■□□□ 1.1
SPSB3-201ENST00000301717 EVI5LQ96CN4 794 aa21.91■■□□□ 1.1
SPSB3-201ENST00000301717 DYNLL2Q96FJ2 89 aa21.91■■□□□ 1.1
SPSB3-201ENST00000301717 PRDM10Q9NQV6 1147 aa21.91■■□□□ 1.1
SPSB3-201ENST00000301717 SERPINB13Q9UIV8 391 aa21.91■■□□□ 1.1
SPSB3-201ENST00000301717 KCNH4Q9UQ05 1017 aa21.91■■□□□ 1.1
SPSB3-201ENST00000301717 TRIM75PA6NK02 468 aa21.9■■□□□ 1.1
SPSB3-201ENST00000301717 TRIM6-TRIM34B2RNG4 842 aa21.9■■□□□ 1.1
SPSB3-201ENST00000301717 DGKZQ13574 1117 aa21.9■■□□□ 1.1
SPSB3-201ENST00000301717 MOGSQ13724 837 aa21.9■■□□□ 1.1
SPSB3-201ENST00000301717 DOCK1Q14185 1865 aa21.9■■□□□ 1.1
SPSB3-201ENST00000301717 ZMYM1Q5SVZ6 1142 aa21.9■■□□□ 1.1
SPSB3-201ENST00000301717 TTC6Q86TZ1 520 aa21.9■■□□□ 1.1
SPSB3-201ENST00000301717 SKAP1Q86WV1 359 aa21.9■■□□□ 1.1
SPSB3-201ENST00000301717 RILPL2Q969X0 211 aa21.9■■□□□ 1.1
SPSB3-201ENST00000301717 EPB41L4AQ9HCS5 686 aaPredicted RBP21.9■■□□□ 1.1
SPSB3-201ENST00000301717 AFG3L2Q9Y4W6 797 aa21.9■■□□□ 1.1
SPSB3-201ENST00000301717 GSG1L2A8MUP6 293 aa21.89■■□□□ 1.1
SPSB3-201ENST00000301717 BTBD19C9JJ37 291 aa21.89■■□□□ 1.1
SPSB3-201ENST00000301717 USP17L12C9JPN9 530 aa21.89■■□□□ 1.1
SPSB3-201ENST00000301717 USP17L21D6R901 530 aa21.89■■□□□ 1.1
SPSB3-201ENST00000301717 SHMT1P34896 483 aa21.89■■□□□ 1.1
SPSB3-201ENST00000301717 EHD4Q9H223 541 aa21.89■■□□□ 1.1
SPSB3-201ENST00000301717 OSBPL3Q9H4L5 887 aa21.89■■□□□ 1.1
SPSB3-201ENST00000301717 CETPP11597 493 aa21.89■■□□□ 1.09
SPSB3-201ENST00000301717 GABPAQ06546 454 aa21.89■■□□□ 1.09
SPSB3-201ENST00000301717 CRHR2Q13324 411 aa21.89■■□□□ 1.09
SPSB3-201ENST00000301717 FAM227BQ96M60 508 aa21.89■■□□□ 1.09
SPSB3-201ENST00000301717 ATP8A2Q9NTI2 1148 aa21.89■■□□□ 1.09
SPSB3-201ENST00000301717 ZBTB21Q9ULJ3 1066 aa21.89■■□□□ 1.09
SPSB3-201ENST00000301717 LAMB1P07942 1786 aa21.88■■□□□ 1.09
SPSB3-201ENST00000301717 GH2P01242 217 aa21.88■■□□□ 1.09
SPSB3-201ENST00000301717 TATDN1Q6P1N9 297 aa21.88■■□□□ 1.09
SPSB3-201ENST00000301717 STK11IPQ8N1F8 1099 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms