RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 UQCRFS1P1P0C7P4 283 aa28.02■■■□□ 2.08
SPTSSA-201ENST00000298130 UTP14CQ5TAP6 766 aaKnown RBP28.02■■■□□ 2.08
SPTSSA-201ENST00000298130 MYH7P12883 1935 aa28.02■■■□□ 2.08
SPTSSA-201ENST00000298130 PSDA5PKW4 1024 aaPredicted RBP28.02■■■□□ 2.08
SPTSSA-201ENST00000298130 FGFR2P21802 821 aa28.02■■■□□ 2.08
SPTSSA-201ENST00000298130 RTN1Q16799 776 aa28.02■■■□□ 2.08
SPTSSA-201ENST00000298130 ZNF512BQ96KM6 892 aaPredicted RBP28.02■■■□□ 2.08
SPTSSA-201ENST00000298130 MAN1B1Q9UKM7 699 aa28.02■■■□□ 2.08
SPTSSA-201ENST00000298130 MMP1P03956 469 aa28.01■■■□□ 2.07
SPTSSA-201ENST00000298130 WTAPQ15007 396 aa28.01■■■□□ 2.07
SPTSSA-201ENST00000298130 VSTM4Q8IW00 320 aa28.01■■■□□ 2.07
SPTSSA-201ENST00000298130 CABP5Q9NP86 173 aa28.01■■■□□ 2.07
SPTSSA-201ENST00000298130 NRDCO43847 1150 aa28.01■■■□□ 2.07
SPTSSA-201ENST00000298130 CDK11BP21127 795 aaKnown RBP28.01■■■□□ 2.07
SPTSSA-201ENST00000298130 ABCF2Q9UG63 623 aa28.01■■■□□ 2.07
SPTSSA-201ENST00000298130 SOS2Q07890 1332 aaPredicted RBP28.01■■■□□ 2.07
SPTSSA-201ENST00000298130 GTPBP4Q9BZE4 634 aaKnown RBP28■■■□□ 2.07
SPTSSA-201ENST00000298130 EIF4ENIF1Q9NRA8 985 aaKnown RBP28■■■□□ 2.07
SPTSSA-201ENST00000298130 KCND1Q9NSA2 647 aa28■■■□□ 2.07
SPTSSA-201ENST00000298130 PAPPAQ13219 1627 aa28■■■□□ 2.07
SPTSSA-201ENST00000298130 PRDM1O75626 825 aa28■■■□□ 2.07
SPTSSA-201ENST00000298130 URI1O94763 535 aaPredicted RBP28■■■□□ 2.07
SPTSSA-201ENST00000298130 SLC5A1P13866 664 aa28■■■□□ 2.07
SPTSSA-201ENST00000298130 ADGRA1Q86SQ6 560 aa28■■■□□ 2.07
SPTSSA-201ENST00000298130 NFE2L3Q9Y4A8 694 aa28■■■□□ 2.07
SPTSSA-201ENST00000298130 LIFRP42702 1097 aa27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 SAFBQ15424 915 aaKnown RBP eCLIP27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 ZNF771Q7L3S4 317 aaPredicted RBP27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 SAMSN1Q9NSI8 373 aaKnown RBP27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 LRP2BPQ9P2M1 347 aa27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 CYP2D7A0A087X1C5 515 aa27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 COBLO75128 1261 aa27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 MDM2Q00987 491 aaPredicted RBP27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 POSTNQ15063 836 aa27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 L2HGDHQ9H9P8 463 aa27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 FBXO2Q9UK22 296 aaPredicted RBP27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 ATRNO75882 1429 aa27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 IFNAR1P17181 557 aa27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 ETF1P62495 437 aaKnown RBP27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 MORC2Q9Y6X9 1032 aaPredicted RBP27.99■■■□□ 2.07
SPTSSA-201ENST00000298130 ARHGAP29Q52LW3 1261 aa27.98■■■□□ 2.07
SPTSSA-201ENST00000298130 TRIM65Q6PJ69 517 aa27.98■■■□□ 2.07
SPTSSA-201ENST00000298130 MED15Q96RN5 788 aa27.98■■■□□ 2.07
SPTSSA-201ENST00000298130 SHANK3Q9BYB0 1731 aa27.98■■■□□ 2.07
SPTSSA-201ENST00000298130 KIF2AO00139 706 aaPredicted RBP27.98■■■□□ 2.07
SPTSSA-201ENST00000298130 KLHL10Q6JEL2 608 aa27.98■■■□□ 2.07
SPTSSA-201ENST00000298130 TRIM22Q8IYM9 498 aa27.98■■■□□ 2.07
SPTSSA-201ENST00000298130 SHISA4Q96DD7 197 aa27.98■■■□□ 2.07
SPTSSA-201ENST00000298130 CCDC93Q567U6 631 aa27.97■■■□□ 2.07
SPTSSA-201ENST00000298130 REXO1L1PQ8IX06 675 aa27.97■■■□□ 2.07
SPTSSA-201ENST00000298130 DESI2Q9BSY9 194 aa27.97■■■□□ 2.07
SPTSSA-201ENST00000298130 VPS54Q9P1Q0 977 aa27.97■■■□□ 2.07
SPTSSA-201ENST00000298130 AFMP43652 599 aa27.97■■■□□ 2.07
SPTSSA-201ENST00000298130 STX17P56962 302 aa27.97■■■□□ 2.07
SPTSSA-201ENST00000298130 EARS2Q5JPH6 523 aaKnown RBP27.97■■■□□ 2.07
SPTSSA-201ENST00000298130 CSRNP2Q9H175 543 aa27.97■■■□□ 2.07
SPTSSA-201ENST00000298130 CBFA2T2O43439 604 aa27.96■■■□□ 2.07
SPTSSA-201ENST00000298130 NOM1Q5C9Z4 860 aaKnown RBP27.96■■■□□ 2.07
SPTSSA-201ENST00000298130 CRACR2BQ8N4Y2 399 aaPredicted RBP27.96■■■□□ 2.07
SPTSSA-201ENST00000298130 FAM237AA0A1B0GTK4 181 aa27.95■■■□□ 2.07
SPTSSA-201ENST00000298130 TOGARAM2Q6ZUX3 1019 aa27.95■■■□□ 2.07
SPTSSA-201ENST00000298130 STAMQ92783 540 aa27.95■■■□□ 2.07
SPTSSA-201ENST00000298130 MROH5Q6ZUA9 1318 aa27.95■■■□□ 2.07
SPTSSA-201ENST00000298130 ERICH2A1L162 156 aa27.95■■■□□ 2.06
SPTSSA-201ENST00000298130 WNT7AO00755 349 aa27.95■■■□□ 2.06
SPTSSA-201ENST00000298130 ALX1Q15699 326 aa27.95■■■□□ 2.06
SPTSSA-201ENST00000298130 DHX58Q96C10 678 aa27.95■■■□□ 2.06
SPTSSA-201ENST00000298130 EPSTI1Q96J88 318 aa27.95■■■□□ 2.06
SPTSSA-201ENST00000298130 CARD6Q9BX69 1037 aa27.95■■■□□ 2.06
SPTSSA-201ENST00000298130 KRT23Q9C075 422 aa27.95■■■□□ 2.06
SPTSSA-201ENST00000298130 DDX60Q8IY21 1712 aaKnown RBP27.95■■■□□ 2.06
SPTSSA-201ENST00000298130 EVX2Q03828 476 aa27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 TMEM139Q8IV31 216 aa27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 SMYD4Q8IYR2 804 aaPredicted RBP27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 ZNF654Q8IZM8 581 aa27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 PTPREP23469 700 aa27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 ZNF34Q8IZ26 560 aa27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 FANCBQ8NB91 859 aa27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 ZBTB9Q96C00 473 aa27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 ACSBG1Q96GR2 724 aa27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 ZNF335Q9H4Z2 1342 aaPredicted RBP27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 CYP7A1P22680 504 aa27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 CLCN6P51797 869 aa27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 KRT222Q8N1A0 295 aa27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 SMARCE1Q969G3 411 aa27.94■■■□□ 2.06
SPTSSA-201ENST00000298130 MTF1Q14872 753 aa27.93■■■□□ 2.06
SPTSSA-201ENST00000298130 WDR24Q96S15 920 aa27.93■■■□□ 2.06
SPTSSA-201ENST00000298130 NACAP1Q9BZK3 213 aa27.93■■■□□ 2.06
SPTSSA-201ENST00000298130 PPP2R2CQ9Y2T4 447 aa27.93■■■□□ 2.06
SPTSSA-201ENST00000298130 A0A087X0B3 334 aa27.93■■■□□ 2.06
SPTSSA-201ENST00000298130 VWA3AA6NCI4 1184 aa27.93■■■□□ 2.06
SPTSSA-201ENST00000298130 CPLX3Q8WVH0 158 aa27.93■■■□□ 2.06
SPTSSA-201ENST00000298130 UBAC1Q9BSL1 405 aa27.93■■■□□ 2.06
SPTSSA-201ENST00000298130 CNNM2Q9H8M5 875 aa27.93■■■□□ 2.06
SPTSSA-201ENST00000298130 SLIT2O94813 1529 aa27.92■■■□□ 2.06
SPTSSA-201ENST00000298130 SART3Q15020 963 aaKnown RBP27.92■■■□□ 2.06
SPTSSA-201ENST00000298130 GYG1P46976 350 aa27.92■■■□□ 2.06
SPTSSA-201ENST00000298130 PPARAQ07869 468 aa27.92■■■□□ 2.06
SPTSSA-201ENST00000298130 KARSQ15046 597 aaKnown RBP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms