RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 RIOK3O14730 519 aaKnown RBP22.83■■□□□ 1.25
NFIL3-201ENST00000297689 CTIFO43310 598 aaKnown RBP22.83■■□□□ 1.25
NFIL3-201ENST00000297689 GUCY1A2P33402 732 aa22.83■■□□□ 1.25
NFIL3-201ENST00000297689 CCZ1BP86790 482 aa22.83■■□□□ 1.25
NFIL3-201ENST00000297689 CCZ1P86791 482 aaPredicted RBP22.83■■□□□ 1.25
NFIL3-201ENST00000297689 SLC10A5Q5PT55 438 aa22.83■■□□□ 1.25
NFIL3-201ENST00000297689 CDC5LQ99459 802 aaKnown RBP22.83■■□□□ 1.25
NFIL3-201ENST00000297689 KCND1Q9NSA2 647 aa22.83■■□□□ 1.25
NFIL3-201ENST00000297689 GNPATO15228 680 aa22.83■■□□□ 1.24
NFIL3-201ENST00000297689 CUTAO60888 179 aa22.83■■□□□ 1.24
NFIL3-201ENST00000297689 TDO2P48775 406 aa22.83■■□□□ 1.24
NFIL3-201ENST00000297689 TMTC2Q8N394 836 aa22.83■■□□□ 1.24
NFIL3-201ENST00000297689 WASF1Q92558 559 aa22.83■■□□□ 1.24
NFIL3-201ENST00000297689 CACNA1SQ13698 1873 aa22.83■■□□□ 1.24
NFIL3-201ENST00000297689 COL1A1P02452 1464 aaPredicted RBP22.82■■□□□ 1.24
NFIL3-201ENST00000297689 IKBKBO14920 756 aa22.82■■□□□ 1.24
NFIL3-201ENST00000297689 MMP1P03956 469 aa22.82■■□□□ 1.24
NFIL3-201ENST00000297689 TOB1P50616 345 aaPredicted RBP22.82■■□□□ 1.24
NFIL3-201ENST00000297689 TRIM29Q14134 588 aa22.82■■□□□ 1.24
NFIL3-201ENST00000297689 ZNF772Q68DY9 489 aaPredicted RBP22.82■■□□□ 1.24
NFIL3-201ENST00000297689 NOSTRINQ8IVI9 506 aa22.82■■□□□ 1.24
NFIL3-201ENST00000297689 ELOA2Q8IYF1 753 aaPredicted RBP22.82■■□□□ 1.24
NFIL3-201ENST00000297689 TSC1Q92574 1164 aa22.82■■□□□ 1.24
NFIL3-201ENST00000297689 HSD3B7Q9H2F3 369 aa22.82■■□□□ 1.24
NFIL3-201ENST00000297689 LRP2BPQ9P2M1 347 aa22.82■■□□□ 1.24
NFIL3-201ENST00000297689 UBE4AQ14139 1066 aa22.81■■□□□ 1.24
NFIL3-201ENST00000297689 WTAPQ15007 396 aa22.81■■□□□ 1.24
NFIL3-201ENST00000297689 SEC23AQ15436 765 aa22.81■■□□□ 1.24
NFIL3-201ENST00000297689 CRACR2BQ8N4Y2 399 aaPredicted RBP22.81■■□□□ 1.24
NFIL3-201ENST00000297689 MIGA1Q8NAN2 632 aa22.81■■□□□ 1.24
NFIL3-201ENST00000297689 RNF41Q9H4P4 317 aaPredicted RBP22.81■■□□□ 1.24
NFIL3-201ENST00000297689 IMPACTQ9P2X3 320 aa22.81■■□□□ 1.24
NFIL3-201ENST00000297689 BRWD3Q6RI45 1802 aa22.81■■□□□ 1.24
NFIL3-201ENST00000297689 WTIPA6NIX2 430 aaPredicted RBP22.81■■□□□ 1.24
NFIL3-201ENST00000297689 PPARAQ07869 468 aa22.81■■□□□ 1.24
NFIL3-201ENST00000297689 CHAF1AQ13111 956 aaPredicted RBP22.81■■□□□ 1.24
NFIL3-201ENST00000297689 RTN1Q16799 776 aa22.81■■□□□ 1.24
NFIL3-201ENST00000297689 RIOK1Q9BRS2 568 aaKnown RBP22.81■■□□□ 1.24
NFIL3-201ENST00000297689 EP400Q96L91 3159 aa22.81■■□□□ 1.24
NFIL3-201ENST00000297689 CYP7A1P22680 504 aa22.8■■□□□ 1.24
NFIL3-201ENST00000297689 SART3Q15020 963 aaKnown RBP22.8■■□□□ 1.24
NFIL3-201ENST00000297689 FBXW7Q969H0 707 aa22.8■■□□□ 1.24
NFIL3-201ENST00000297689 CLIC6Q96NY7 704 aa22.8■■□□□ 1.24
NFIL3-201ENST00000297689 BSDC1Q9NW68 430 aaPredicted RBP22.8■■□□□ 1.24
NFIL3-201ENST00000297689 BTBD18B2RXH4 712 aa22.8■■□□□ 1.24
NFIL3-201ENST00000297689 BIN1O00499 593 aa22.8■■□□□ 1.24
NFIL3-201ENST00000297689 ANKRD18AQ8IVF6 992 aa22.8■■□□□ 1.24
NFIL3-201ENST00000297689 STK11IPQ8N1F8 1099 aa22.8■■□□□ 1.24
NFIL3-201ENST00000297689 ZKSCAN3Q9BRR0 538 aa22.8■■□□□ 1.24
NFIL3-201ENST00000297689 FOXP1Q9H334 677 aaPredicted RBP22.8■■□□□ 1.24
NFIL3-201ENST00000297689 SKILP12757 684 aa22.79■■□□□ 1.24
NFIL3-201ENST00000297689 GSDMDP57764 484 aa22.79■■□□□ 1.24
NFIL3-201ENST00000297689 GNL2Q13823 731 aaKnown RBP22.79■■□□□ 1.24
NFIL3-201ENST00000297689 FANCBQ8NB91 859 aa22.79■■□□□ 1.24
NFIL3-201ENST00000297689 ARHGEF1Q92888 912 aaKnown RBP22.79■■□□□ 1.24
NFIL3-201ENST00000297689 SMTNL1A8MU46 457 aa22.78■■□□□ 1.24
NFIL3-201ENST00000297689 ZRSR1Q15695 479 aaKnown RBP22.78■■□□□ 1.24
NFIL3-201ENST00000297689 METTL16Q86W50 562 aaKnown RBP22.78■■□□□ 1.24
NFIL3-201ENST00000297689 FOXP4Q8IVH2 680 aaPredicted RBP22.78■■□□□ 1.24
NFIL3-201ENST00000297689 CELF1Q92879 486 aaKnown RBP22.78■■□□□ 1.24
NFIL3-201ENST00000297689 C16orf45Q96MC5 204 aaPredicted RBP22.78■■□□□ 1.24
NFIL3-201ENST00000297689 XPO4Q9C0E2 1151 aaKnown RBP22.78■■□□□ 1.24
NFIL3-201ENST00000297689 RTCBQ9Y3I0 505 aaKnown RBP22.78■■□□□ 1.24
NFIL3-201ENST00000297689 CCDC196A0A1B0GTZ2 297 aa22.78■■□□□ 1.24
NFIL3-201ENST00000297689 DEXIO95424 95 aa22.78■■□□□ 1.24
NFIL3-201ENST00000297689 FGRP09769 529 aa22.78■■□□□ 1.24
NFIL3-201ENST00000297689 TNNT1P13805 278 aa22.78■■□□□ 1.24
NFIL3-201ENST00000297689 MDM2Q00987 491 aaPredicted RBP22.78■■□□□ 1.24
NFIL3-201ENST00000297689 RRP12Q5JTH9 1297 aaKnown RBP22.78■■□□□ 1.24
NFIL3-201ENST00000297689 NYAP1Q6ZVC0 841 aa22.78■■□□□ 1.24
NFIL3-201ENST00000297689 FILIP1Q7Z7B0 1213 aa22.78■■□□□ 1.24
NFIL3-201ENST00000297689 DIS3L2Q8IYB7 885 aaKnown RBP22.78■■□□□ 1.24
NFIL3-201ENST00000297689 ZNF654Q8IZM8 581 aa22.78■■□□□ 1.24
NFIL3-201ENST00000297689 ZNF384Q8TF68 577 aa22.78■■□□□ 1.24
NFIL3-201ENST00000297689 ZPR1O75312 459 aa22.77■■□□□ 1.24
NFIL3-201ENST00000297689 PTPREP23469 700 aa22.77■■□□□ 1.24
NFIL3-201ENST00000297689 GYG1P46976 350 aa22.77■■□□□ 1.24
NFIL3-201ENST00000297689 LONRF3Q496Y0 759 aa22.77■■□□□ 1.24
NFIL3-201ENST00000297689 TRIM22Q8IYM9 498 aa22.77■■□□□ 1.24
NFIL3-201ENST00000297689 SETDB2Q96T68 719 aa22.77■■□□□ 1.24
NFIL3-201ENST00000297689 PPP2R5BQ15173 497 aa22.77■■□□□ 1.23
NFIL3-201ENST00000297689 KRBA2Q6ZNG9 492 aa22.77■■□□□ 1.23
NFIL3-201ENST00000297689 KRI1Q8N9T8 703 aaKnown RBP22.77■■□□□ 1.23
NFIL3-201ENST00000297689 SDR42E1Q8WUS8 393 aa22.77■■□□□ 1.23
NFIL3-201ENST00000297689 IFNKQ9P0W0 207 aa22.77■■□□□ 1.23
NFIL3-201ENST00000297689 KCNH3Q9ULD8 1083 aa22.77■■□□□ 1.23
NFIL3-201ENST00000297689 MINPP1Q9UNW1 487 aa22.77■■□□□ 1.23
NFIL3-201ENST00000297689 KCNJ14Q9UNX9 436 aa22.77■■□□□ 1.23
NFIL3-201ENST00000297689 IQSEC3Q9UPP2 1182 aaPredicted RBP22.77■■□□□ 1.23
NFIL3-201ENST00000297689 MORC2Q9Y6X9 1032 aaPredicted RBP22.77■■□□□ 1.23
NFIL3-201ENST00000297689 MAGEB6P1A0A0J9YX57 407 aa22.76■■□□□ 1.23
NFIL3-201ENST00000297689 SMIM22K7EJ46 135 aa22.76■■□□□ 1.23
NFIL3-201ENST00000297689 GTF2E1P29083 439 aaPredicted RBP22.76■■□□□ 1.23
NFIL3-201ENST00000297689 CCDC24Q8N4L8 307 aa22.76■■□□□ 1.23
NFIL3-201ENST00000297689 FAM84BQ96KN1 310 aaPredicted RBP22.76■■□□□ 1.23
NFIL3-201ENST00000297689 NYXQ9GZU5 481 aa22.76■■□□□ 1.23
NFIL3-201ENST00000297689 FBXO2Q9UK22 296 aaPredicted RBP22.76■■□□□ 1.23
NFIL3-201ENST00000297689 ERICH2A1L162 156 aa22.75■■□□□ 1.23
NFIL3-201ENST00000297689 USP27XA6NNY8 438 aa22.75■■□□□ 1.23
NFIL3-201ENST00000297689 FUT2Q10981 343 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms