RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 SYF2O95926 243 aaKnown RBP13.03□□□□□ -0.32
SHROOM3-201ENST00000296043 DRC3Q9H069 523 aa13.03□□□□□ -0.32
SHROOM3-201ENST00000296043 RNF41Q9H4P4 317 aaPredicted RBP13.03□□□□□ -0.32
SHROOM3-201ENST00000296043 TAB2Q9NYJ8 693 aa13.03□□□□□ -0.32
SHROOM3-201ENST00000296043 SUPT6HQ7KZ85 1726 aaKnown RBP13.02□□□□□ -0.32
SHROOM3-201ENST00000296043 TRIM75PA6NK02 468 aa13.02□□□□□ -0.32
SHROOM3-201ENST00000296043 HEATR3Q7Z4Q2 680 aa13.02□□□□□ -0.32
SHROOM3-201ENST00000296043 CROCCP2Q86T23 111 aa13.02□□□□□ -0.32
SHROOM3-201ENST00000296043 ZRANB2O95218 330 aaKnown RBP eCLIP13.02□□□□□ -0.32
SHROOM3-201ENST00000296043 MYO1EQ12965 1108 aa13.02□□□□□ -0.32
SHROOM3-201ENST00000296043 NOC4LQ9BVI4 516 aaKnown RBP13.02□□□□□ -0.32
SHROOM3-201ENST00000296043 SPZ1Q9BXG8 430 aa13.02□□□□□ -0.32
SHROOM3-201ENST00000296043 ZNF513Q8N8E2 541 aaPredicted RBP13.02□□□□□ -0.32
SHROOM3-201ENST00000296043 AGTPBP1Q9UPW5 1226 aa13.02□□□□□ -0.32
SHROOM3-201ENST00000296043 PPP2R2CQ9Y2T4 447 aa13.02□□□□□ -0.32
SHROOM3-201ENST00000296043 ARHGEF9O43307 516 aa13.02□□□□□ -0.33
SHROOM3-201ENST00000296043 CCDC89Q8N998 374 aa13.02□□□□□ -0.33
SHROOM3-201ENST00000296043 DTNBO60941 627 aa13.02□□□□□ -0.33
SHROOM3-201ENST00000296043 RABGGTAQ92696 567 aa13.02□□□□□ -0.33
SHROOM3-201ENST00000296043 SNRKQ9NRH2 765 aa13.02□□□□□ -0.33
SHROOM3-201ENST00000296043 SBNO1A3KN83 1393 aa13.02□□□□□ -0.33
SHROOM3-201ENST00000296043 LONRF2Q1L5Z9 754 aa13.02□□□□□ -0.33
SHROOM3-201ENST00000296043 TMTC1Q8IUR5 882 aa13.02□□□□□ -0.33
SHROOM3-201ENST00000296043 BMP15O95972 392 aa13.02□□□□□ -0.33
SHROOM3-201ENST00000296043 CHST3Q7LGC8 479 aa13.02□□□□□ -0.33
SHROOM3-201ENST00000296043 PEX26Q7Z412 305 aa13.02□□□□□ -0.33
SHROOM3-201ENST00000296043 SART1O43290 800 aaKnown RBP13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 TTLL11Q8NHH1 800 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 NLRP7Q8WX94 980 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 ANGPTL2Q9UKU9 493 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 EIF2AQ9BY44 585 aaKnown RBP13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 RHBDL2Q9NX52 303 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 RPS6KA1Q15418 735 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 PPP1R13BQ96KQ4 1090 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 KAT6AQ92794 2004 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 DNAJC6O75061 913 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 KRT5P13647 590 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 CSRNP2Q9H175 543 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 USP26Q9BXU7 913 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 BIN2Q9UBW5 565 aaPredicted RBP13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 EVI5O60447 810 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 CWF19L2Q2TBE0 894 aaKnown RBP13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 ZBTB41Q5SVQ8 909 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 RPGRQ92834 1020 aaKnown RBP13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 HELLSQ9NRZ9 838 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 NLRP12P59046 1061 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 NBPF20Q3BBV1 942 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 MPHOSPH6Q99547 160 aaKnown RBP13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 HOMER3Q9NSC5 361 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 ZPR1O75312 459 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 WTAPQ15007 396 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 HDAC9Q9UKV0 1011 aa13.01□□□□□ -0.33
SHROOM3-201ENST00000296043 HIBCHQ6NVY1 386 aaPredicted RBP13□□□□□ -0.33
SHROOM3-201ENST00000296043 USP37Q86T82 979 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 CASC4Q6P4E1 433 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 ADAT2Q7Z6V5 191 aaKnown RBP13□□□□□ -0.33
SHROOM3-201ENST00000296043 TBC1D8BQ0IIM8 1120 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 TYW1BQ6NUM6 668 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 GTF3C5Q9Y5Q8 519 aaPredicted RBP13□□□□□ -0.33
SHROOM3-201ENST00000296043 H0Y3Z8 333 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 PMS1P54277 932 aaKnown RBP13□□□□□ -0.33
SHROOM3-201ENST00000296043 TEKT1Q969V4 418 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 HELBQ8NG08 1087 aaPredicted RBP13□□□□□ -0.33
SHROOM3-201ENST00000296043 GDAP1Q8TB36 358 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 INTS4Q96HW7 963 aaKnown RBP13□□□□□ -0.33
SHROOM3-201ENST00000296043 RAP1GDS1P52306 607 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 ANKRD20A4Q4UJ75 823 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 ANKRD20A8PQ5CZ79 823 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 ANKRD20A2Q5SQ80 823 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 ANKRD20A1Q5TYW2 823 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 TRMT44Q8IYL2 757 aaKnown RBP13□□□□□ -0.33
SHROOM3-201ENST00000296043 KRIT1O00522 736 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 MAP3K12Q12852 859 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 ACTR5Q9H9F9 607 aaPredicted RBP13□□□□□ -0.33
SHROOM3-201ENST00000296043 RASSF10A6NK89 507 aa13□□□□□ -0.33
SHROOM3-201ENST00000296043 ZNF644Q9H582 1327 aaPredicted RBP12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 PTPDC1A2A3K4 754 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 ABTB2Q8N961 1025 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 RAB17Q9H0T7 212 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 MSH2P43246 934 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 CAPN12Q6ZSI9 719 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 PPP1R42Q7Z4L9 355 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 CCDC125Q86Z20 511 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 SDCCAG3Q96C92 435 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 CYTH2Q99418 400 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 KRT12Q99456 494 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 MYD88Q99836 296 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 GAS2L3Q86XJ1 694 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 ABCC11Q96J66 1382 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 VWA3AA6NCI4 1184 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 TADA3O75528 432 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 KRT9P35527 623 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 PDE1AP54750 535 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 KIFC2Q96AC6 838 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 DTNBP1Q96EV8 351 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 MAP3K1Q13233 1512 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 TRIM66O15016 1216 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 KLHL29Q96CT2 875 aa12.99□□□□□ -0.33
SHROOM3-201ENST00000296043 CCDC68Q9H2F9 335 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms