RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 CRACR2BQ8N4Y2 399 aaPredicted RBP18.34■□□□□ 0.53
NCK1-201ENST00000288986 TRIM34Q9BYJ4 488 aa18.34■□□□□ 0.53
NCK1-201ENST00000288986 IL25Q9H293 177 aa18.34■□□□□ 0.53
NCK1-201ENST00000288986 HUNKP57058 714 aa18.33■□□□□ 0.53
NCK1-201ENST00000288986 HTRA3P83110 453 aa18.33■□□□□ 0.53
NCK1-201ENST00000288986 SAPCD2Q86UD0 394 aa18.33■□□□□ 0.53
NCK1-201ENST00000288986 FOXP4Q8IVH2 680 aaPredicted RBP18.33■□□□□ 0.53
NCK1-201ENST00000288986 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.33■□□□□ 0.53
NCK1-201ENST00000288986 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.33■□□□□ 0.53
NCK1-201ENST00000288986 COL2A1P02458 1487 aaPredicted RBP18.33■□□□□ 0.53
NCK1-201ENST00000288986 FAM196BA6NMK8 535 aa18.33■□□□□ 0.52
NCK1-201ENST00000288986 HSPD1P10809 573 aaKnown RBP18.33■□□□□ 0.52
NCK1-201ENST00000288986 CTR9Q6PD62 1173 aa18.33■□□□□ 0.52
NCK1-201ENST00000288986 ZNF341Q9BYN7 854 aa18.33■□□□□ 0.52
NCK1-201ENST00000288986 NAPBQ9H115 298 aa18.33■□□□□ 0.52
NCK1-201ENST00000288986 EPB41L4AQ9HCS5 686 aaPredicted RBP18.33■□□□□ 0.52
NCK1-201ENST00000288986 TLL2Q9Y6L7 1015 aa18.33■□□□□ 0.52
NCK1-201ENST00000288986 CDK5RAP2Q96SN8 1893 aa18.33■□□□□ 0.52
NCK1-201ENST00000288986 TRPM7Q96QT4 1865 aa18.32■□□□□ 0.52
NCK1-201ENST00000288986 KLRG1Q96E93 195 aa18.32■□□□□ 0.52
NCK1-201ENST00000288986 WRNIP1Q96S55 665 aa18.32■□□□□ 0.52
NCK1-201ENST00000288986 ARPP21Q9UBL0 812 aaPredicted RBP18.32■□□□□ 0.52
NCK1-201ENST00000288986 HERC5Q9UII4 1024 aaKnown RBP18.32■□□□□ 0.52
NCK1-201ENST00000288986 SERPINB13Q9UIV8 391 aa18.32■□□□□ 0.52
NCK1-201ENST00000288986 FOCADQ5VW36 1801 aa18.31■□□□□ 0.52
NCK1-201ENST00000288986 PCNTO95613 3336 aa18.31■□□□□ 0.52
NCK1-201ENST00000288986 CYP2D7A0A087X1C5 515 aa18.31■□□□□ 0.52
NCK1-201ENST00000288986 MINDY4BA8MYZ0 360 aa18.31■□□□□ 0.52
NCK1-201ENST00000288986 FOXP2O15409 715 aa18.31■□□□□ 0.52
NCK1-201ENST00000288986 TBC1D12O60347 775 aa18.31■□□□□ 0.52
NCK1-201ENST00000288986 CYP2D6P10635 497 aa18.31■□□□□ 0.52
NCK1-201ENST00000288986 MAP3K11Q16584 847 aa18.31■□□□□ 0.52
NCK1-201ENST00000288986 RAD50Q92878 1312 aa18.31■□□□□ 0.52
NCK1-201ENST00000288986 MAP3K10Q02779 954 aa18.31■□□□□ 0.52
NCK1-201ENST00000288986 EVX2Q03828 476 aa18.31■□□□□ 0.52
NCK1-201ENST00000288986 C12orf60Q5U649 245 aa18.31■□□□□ 0.52
NCK1-201ENST00000288986 IL17RAQ96F46 866 aa18.31■□□□□ 0.52
NCK1-201ENST00000288986 FGAP02671 866 aa18.3■□□□□ 0.52
NCK1-201ENST00000288986 PAXIP1Q6ZW49 1069 aaPredicted RBP18.3■□□□□ 0.52
NCK1-201ENST00000288986 ANKRD13AQ8IZ07 590 aa18.3■□□□□ 0.52
NCK1-201ENST00000288986 MAP3K9P80192 1104 aa18.29■□□□□ 0.52
NCK1-201ENST00000288986 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.29■□□□□ 0.52
NCK1-201ENST00000288986 ZKSCAN4Q969J2 545 aaPredicted RBP18.29■□□□□ 0.52
NCK1-201ENST00000288986 EHD4Q9H223 541 aa18.29■□□□□ 0.52
NCK1-201ENST00000288986 MYH1P12882 1939 aa18.29■□□□□ 0.52
NCK1-201ENST00000288986 SMIM22K7EJ46 135 aa18.29■□□□□ 0.52
NCK1-201ENST00000288986 DEFB115Q30KQ5 88 aa18.29■□□□□ 0.52
NCK1-201ENST00000288986 SBK1Q52WX2 424 aa18.29■□□□□ 0.52
NCK1-201ENST00000288986 LDLRAD1Q5T700 205 aa18.29■□□□□ 0.52
NCK1-201ENST00000288986 METTL16Q86W50 562 aaKnown RBP18.29■□□□□ 0.52
NCK1-201ENST00000288986 STK11IPQ8N1F8 1099 aa18.29■□□□□ 0.52
NCK1-201ENST00000288986 DYNLL2Q96FJ2 89 aa18.29■□□□□ 0.52
NCK1-201ENST00000288986 CSADQ9Y600 493 aa18.29■□□□□ 0.52
NCK1-201ENST00000288986 PHF20L1A8MW92 1017 aa18.28■□□□□ 0.52
NCK1-201ENST00000288986 INPP5BP32019 993 aa18.28■□□□□ 0.52
NCK1-201ENST00000288986 ZNF157P51786 506 aaPredicted RBP18.28■□□□□ 0.52
NCK1-201ENST00000288986 GRM1Q13255 1194 aa18.28■□□□□ 0.52
NCK1-201ENST00000288986 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.28■□□□□ 0.52
NCK1-201ENST00000288986 KIAA1211Q6ZU35 1233 aa18.28■□□□□ 0.52
NCK1-201ENST00000288986 DSCC1Q9BVC3 393 aa18.28■□□□□ 0.52
NCK1-201ENST00000288986 LSG1Q9H089 658 aaKnown RBP18.28■□□□□ 0.52
NCK1-201ENST00000288986 DNAJC18Q9H819 358 aa18.28■□□□□ 0.52
NCK1-201ENST00000288986 ZNF112Q9UJU3 913 aa18.28■□□□□ 0.52
NCK1-201ENST00000288986 BAZ2AQ9UIF9 1905 aaKnown RBP18.28■□□□□ 0.52
NCK1-201ENST00000288986 PAPPA2Q9BXP8 1791 aa18.28■□□□□ 0.52
NCK1-201ENST00000288986 NAV1Q8NEY1 1877 aa18.28■□□□□ 0.52
NCK1-201ENST00000288986 ALX1Q15699 326 aa18.27■□□□□ 0.52
NCK1-201ENST00000288986 SLC10A4Q96EP9 437 aa18.27■□□□□ 0.52
NCK1-201ENST00000288986 CLMNQ96JQ2 1002 aa18.27■□□□□ 0.52
NCK1-201ENST00000288986 ANO2Q9NQ90 1003 aa18.27■□□□□ 0.52
NCK1-201ENST00000288986 PPARAQ07869 468 aa18.27■□□□□ 0.51
NCK1-201ENST00000288986 VGLL4Q14135 290 aa18.27■□□□□ 0.51
NCK1-201ENST00000288986 RGMBQ6NW40 437 aa18.27■□□□□ 0.51
NCK1-201ENST00000288986 UNCXA6NJT0 531 aa18.26■□□□□ 0.51
NCK1-201ENST00000288986 RASSF10A6NK89 507 aa18.26■□□□□ 0.51
NCK1-201ENST00000288986 GABPAQ06546 454 aa18.26■□□□□ 0.51
NCK1-201ENST00000288986 SLC44A5Q8NCS7 719 aa18.26■□□□□ 0.51
NCK1-201ENST00000288986 SNX21Q969T3 373 aa18.26■□□□□ 0.51
NCK1-201ENST00000288986 HHIPL1Q96JK4 782 aa18.26■□□□□ 0.51
NCK1-201ENST00000288986 ELP3Q9H9T3 547 aa18.26■□□□□ 0.51
NCK1-201ENST00000288986 CTNND1O60716 968 aaKnown RBP18.25■□□□□ 0.51
NCK1-201ENST00000288986 PTH1RQ03431 593 aa18.25■□□□□ 0.51
NCK1-201ENST00000288986 SWAP70Q9UH65 585 aa18.25■□□□□ 0.51
NCK1-201ENST00000288986 SLC3A2P08195 630 aaKnown RBP18.25■□□□□ 0.51
NCK1-201ENST00000288986 CDK8P49336 464 aa18.25■□□□□ 0.51
NCK1-201ENST00000288986 ANAPC15P60006 121 aa18.25■□□□□ 0.51
NCK1-201ENST00000288986 BECN1Q14457 450 aa18.25■□□□□ 0.51
NCK1-201ENST00000288986 CERKLQ49MI3 558 aaPredicted RBP18.25■□□□□ 0.51
NCK1-201ENST00000288986 CYP4F22Q6NT55 531 aa18.25■□□□□ 0.51
NCK1-201ENST00000288986 TATDN1Q6P1N9 297 aa18.25■□□□□ 0.51
NCK1-201ENST00000288986 C16orf86Q6ZW13 317 aa18.25■□□□□ 0.51
NCK1-201ENST00000288986 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
NCK1-201ENST00000288986 DDX60LQ5H9U9 1706 aaKnown RBP18.25■□□□□ 0.51
NCK1-201ENST00000288986 ZNF213O14771 459 aa18.24■□□□□ 0.51
NCK1-201ENST00000288986 GDF11O95390 407 aa18.24■□□□□ 0.51
NCK1-201ENST00000288986 ZMYM6O95789 1325 aa18.24■□□□□ 0.51
NCK1-201ENST00000288986 SHMT1P34896 483 aa18.24■□□□□ 0.51
NCK1-201ENST00000288986 HSPA4P34932 840 aa18.24■□□□□ 0.51
NCK1-201ENST00000288986 CAP2P40123 477 aa18.24■□□□□ 0.51
NCK1-201ENST00000288986 HAND2P61296 217 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms