RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 TM4SF4P48230 202 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 TNNI2P48788 182 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 RGS3P49796 1198 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 GSTO1P78417 241 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 KIF23Q02241 960 aaPredicted RBP11.17□□□□□ -0.62
HMGN1-201ENST00000288344 NOGQ13253 232 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 DZIP1Q86YF9 867 aaKnown RBP11.17□□□□□ -0.62
HMGN1-201ENST00000288344 SLF2Q8IX21 1173 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 SH3RF3Q8TEJ3 882 aaPredicted RBP11.17□□□□□ -0.62
HMGN1-201ENST00000288344 GCC1Q96CN9 775 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 BOLA2Q9H3K6 86 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 ECHDC1Q9NTX5 307 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 RAI14Q9P0K7 980 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 STAP2Q9UGK3 403 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 ANGEL1Q9UNK9 670 aaKnown RBP11.17□□□□□ -0.62
HMGN1-201ENST00000288344 COL2A1P02458 1487 aaPredicted RBP11.17□□□□□ -0.62
HMGN1-201ENST00000288344 OTOFQ9HC10 1997 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 SIPA1L1O43166 1804 aa11.17□□□□□ -0.62
HMGN1-201ENST00000288344 MAST2Q6P0Q8 1798 aa11.16□□□□□ -0.62
HMGN1-201ENST00000288344 FOXN1O15353 648 aa11.16□□□□□ -0.62
HMGN1-201ENST00000288344 PPP1R12BO60237 982 aaPredicted RBP11.16□□□□□ -0.62
HMGN1-201ENST00000288344 TBC1D12O60347 775 aa11.16□□□□□ -0.62
HMGN1-201ENST00000288344 DYNLL1P63167 89 aaKnown RBP11.16□□□□□ -0.62
HMGN1-201ENST00000288344 SLFNL1Q499Z3 407 aa11.16□□□□□ -0.62
HMGN1-201ENST00000288344 SPRYD7Q5W111 196 aa11.16□□□□□ -0.62
HMGN1-201ENST00000288344 NAA16Q6N069 864 aaPredicted RBP11.16□□□□□ -0.62
HMGN1-201ENST00000288344 ARMC9Q7Z3E5 817 aa11.16□□□□□ -0.62
HMGN1-201ENST00000288344 HTTP42858 3142 aa11.16□□□□□ -0.62
HMGN1-201ENST00000288344 PDE6AP16499 860 aa11.15□□□□□ -0.62
HMGN1-201ENST00000288344 NF2P35240 595 aa11.15□□□□□ -0.62
HMGN1-201ENST00000288344 MAP3K9P80192 1104 aa11.15□□□□□ -0.62
HMGN1-201ENST00000288344 MAP2K1Q02750 393 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-201ENST00000288344 TCP10Q12799 353 aa11.15□□□□□ -0.62
HMGN1-201ENST00000288344 PRKG1Q13976 671 aa11.15□□□□□ -0.62
HMGN1-201ENST00000288344 RRP1BQ14684 758 aaKnown RBP11.15□□□□□ -0.62
HMGN1-201ENST00000288344 ANKRD13AQ8IZ07 590 aa11.15□□□□□ -0.62
HMGN1-201ENST00000288344 OSBPL5Q9H0X9 879 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-201ENST00000288344 SNCAIPQ9Y6H5 919 aa11.15□□□□□ -0.62
HMGN1-201ENST00000288344 GOLIM4O00461 696 aa11.14□□□□□ -0.63
HMGN1-201ENST00000288344 CYP7A1P22680 504 aa11.14□□□□□ -0.63
HMGN1-201ENST00000288344 ADD2P35612 726 aa11.14□□□□□ -0.63
HMGN1-201ENST00000288344 MAP3K12Q12852 859 aa11.14□□□□□ -0.63
HMGN1-201ENST00000288344 VGLL4Q14135 290 aa11.14□□□□□ -0.63
HMGN1-201ENST00000288344 TTF1Q15361 905 aaPredicted RBP11.14□□□□□ -0.63
HMGN1-201ENST00000288344 MIGA2Q7L4E1 593 aa11.14□□□□□ -0.63
HMGN1-201ENST00000288344 MAGEB6Q8N7X4 407 aa11.14□□□□□ -0.63
HMGN1-201ENST00000288344 WNK4Q96J92 1243 aa11.14□□□□□ -0.63
HMGN1-201ENST00000288344 PTPN18Q99952 460 aa11.14□□□□□ -0.63
HMGN1-201ENST00000288344 CFHR5Q9BXR6 569 aa11.14□□□□□ -0.63
HMGN1-201ENST00000288344 PAG1Q9NWQ8 432 aa11.14□□□□□ -0.63
HMGN1-201ENST00000288344 AATFQ9NY61 560 aaKnown RBP eCLIP11.14□□□□□ -0.63
HMGN1-201ENST00000288344 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.14□□□□□ -0.63
HMGN1-201ENST00000288344 CENPFP49454 3210 aa11.14□□□□□ -0.63
HMGN1-201ENST00000288344 TTC41PQ6P2S7 1318 aa11.14□□□□□ -0.63
HMGN1-201ENST00000288344 IDH1O75874 414 aaKnown RBP11.13□□□□□ -0.63
HMGN1-201ENST00000288344 ZBTB48P10074 688 aaPredicted RBP11.13□□□□□ -0.63
HMGN1-201ENST00000288344 HSPA8P11142 646 aaKnown RBP11.13□□□□□ -0.63
HMGN1-201ENST00000288344 INPP5BP32019 993 aa11.13□□□□□ -0.63
HMGN1-201ENST00000288344 IREB2P48200 963 aaKnown RBP11.13□□□□□ -0.63
HMGN1-201ENST00000288344 NUCB1Q02818 461 aa11.13□□□□□ -0.63
HMGN1-201ENST00000288344 MOGSQ13724 837 aa11.13□□□□□ -0.63
HMGN1-201ENST00000288344 UBE3CQ15386 1083 aa11.13□□□□□ -0.63
HMGN1-201ENST00000288344 NOL9Q5SY16 702 aaKnown RBP11.13□□□□□ -0.63
HMGN1-201ENST00000288344 SLC9C2Q5TAH2 1124 aa11.13□□□□□ -0.63
HMGN1-201ENST00000288344 TSHZ3Q63HK5 1081 aa11.13□□□□□ -0.63
HMGN1-201ENST00000288344 ZKSCAN4Q969J2 545 aaPredicted RBP11.13□□□□□ -0.63
HMGN1-201ENST00000288344 SLC10A4Q96EP9 437 aa11.13□□□□□ -0.63
HMGN1-201ENST00000288344 DNAJC18Q9H819 358 aa11.13□□□□□ -0.63
HMGN1-201ENST00000288344 GPHNQ9NQX3 736 aaPredicted RBP11.13□□□□□ -0.63
HMGN1-201ENST00000288344 TMOD2Q9NZR1 351 aa11.13□□□□□ -0.63
HMGN1-201ENST00000288344 BOLA1Q9Y3E2 137 aa11.13□□□□□ -0.63
HMGN1-201ENST00000288344 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 BAG3O95817 575 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 PDE1AP54750 535 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 JAG1P78504 1218 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 ANKRD45Q5TZF3 282 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 TEX11Q8IYF3 940 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 KBTBD3Q8NAB2 608 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 ZNF341Q9BYN7 854 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 RWDD1Q9H446 243 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-201ENST00000288344 OSBPL3Q9H4L5 887 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 RNF186Q9NXI6 227 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 FLT1P17948 1338 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 ZNF532Q9HCE3 1301 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 PHIPQ8WWQ0 1821 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 MYH7P12883 1935 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 AK9Q5TCS8 1911 aa11.12□□□□□ -0.63
HMGN1-201ENST00000288344 GABPAQ06546 454 aa11.11□□□□□ -0.63
HMGN1-201ENST00000288344 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
HMGN1-201ENST00000288344 MIGA1Q8NAN2 632 aa11.11□□□□□ -0.63
HMGN1-201ENST00000288344 SLAIN1Q8ND83 568 aa11.11□□□□□ -0.63
HMGN1-201ENST00000288344 TGFBRAP1Q8WUH2 860 aa11.11□□□□□ -0.63
HMGN1-201ENST00000288344 HOOK2Q96ED9 719 aa11.11□□□□□ -0.63
HMGN1-201ENST00000288344 DNAJC2Q99543 621 aaKnown RBP11.11□□□□□ -0.63
HMGN1-201ENST00000288344 PUS7LQ9H0K6 701 aaKnown RBP11.11□□□□□ -0.63
HMGN1-201ENST00000288344 R3HDMLQ9H3Y0 253 aa11.11□□□□□ -0.63
HMGN1-201ENST00000288344 PRDM10Q9NQV6 1147 aa11.11□□□□□ -0.63
HMGN1-201ENST00000288344 SAGE1Q9NXZ1 904 aa11.11□□□□□ -0.63
HMGN1-201ENST00000288344 KCNH4Q9UQ05 1017 aa11.11□□□□□ -0.63
HMGN1-201ENST00000288344 DDX60LQ5H9U9 1706 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms