RNA–Protein interactions for RNA: ENST00000284384.6

PRKCA-201, Transcript of protein kinase C alpha, humanhuman

TSL 5

Gene PRKCA, Length 2,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-201ENST00000284384 MTMR6Q9Y217 621 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 VGLL3A8MV65 326 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 RNF113AO15541 343 aaKnown RBP9.25□□□□□ -0.93
PRKCA-201ENST00000284384 ADCY5O95622 1261 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 TNNI2P48788 182 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 SETDB1Q15047 1291 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 CCDC183Q5T5S1 534 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 TMEM164Q5U3C3 297 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 ZSCAN25Q6NSZ9 544 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 NLRP10Q86W26 655 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 DNAJC10Q8IXB1 793 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 GTF3C6Q969F1 213 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 EPAS1Q99814 870 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 CTNNA3Q9UI47 895 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 TPCN1Q9ULQ1 816 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 NHSQ6T4R5 1651 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 C4AP0C0L4 1744 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 C4BP0C0L5 1744 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 SCAMP3O14828 347 aaKnown RBP9.25□□□□□ -0.93
PRKCA-201ENST00000284384 GNPATO15228 680 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 IFIT1P09914 478 aaKnown RBP9.25□□□□□ -0.93
PRKCA-201ENST00000284384 PYGBP11216 843 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 CTSWP56202 376 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 ST3GAL1Q11201 340 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 MFSD10Q14728 455 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 TTF1Q15361 905 aaPredicted RBP9.25□□□□□ -0.93
PRKCA-201ENST00000284384 ODR4Q5SWX8 454 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 CCDC83Q8IWF9 413 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 UCN2Q96RP3 112 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 NAP1L4Q99733 375 aaKnown RBP9.25□□□□□ -0.93
PRKCA-201ENST00000284384 OGFRQ9NZT2 677 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 CHMP3Q9Y3E7 222 aa9.25□□□□□ -0.93
PRKCA-201ENST00000284384 FARP1Q9Y4F1 1045 aaPredicted RBP9.25□□□□□ -0.93
PRKCA-201ENST00000284384 SPATA31A1Q5TZJ5 1347 aa9.24□□□□□ -0.93
PRKCA-201ENST00000284384 MAST2Q6P0Q8 1798 aa9.24□□□□□ -0.93
PRKCA-201ENST00000284384 EVCP57679 992 aa9.24□□□□□ -0.93
PRKCA-201ENST00000284384 ATL3Q6DD88 541 aa9.24□□□□□ -0.93
PRKCA-201ENST00000284384 PPP1R18Q6NYC8 613 aa9.24□□□□□ -0.93
PRKCA-201ENST00000284384 ASAP1Q9ULH1 1129 aa9.24□□□□□ -0.93
PRKCA-201ENST00000284384 MROH5Q6ZUA9 1318 aa9.24□□□□□ -0.93
PRKCA-201ENST00000284384 PDE8AO60658 829 aa9.24□□□□□ -0.93
PRKCA-201ENST00000284384 ADAMTS2O95450 1211 aa9.24□□□□□ -0.93
PRKCA-201ENST00000284384 LARGE1O95461 756 aa9.24□□□□□ -0.93
PRKCA-201ENST00000284384 CEP120Q8N960 986 aa9.24□□□□□ -0.93
PRKCA-201ENST00000284384 ANKRD7Q92527 254 aa9.24□□□□□ -0.93
PRKCA-201ENST00000284384 ANKRD18BA2A2Z9 1011 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 CYP21A2P08686 494 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 KRT85P78386 507 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 PARP10Q53GL7 1025 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 DHX32Q7L7V1 743 aaKnown RBP9.23□□□□□ -0.93
PRKCA-201ENST00000284384 USP48Q86UV5 1035 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 RAVER1Q8IY67 606 aaKnown RBP9.23□□□□□ -0.93
PRKCA-201ENST00000284384 ZNF34Q8IZ26 560 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 LRRC27Q9C0I9 530 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.23□□□□□ -0.936e-7■■■■□ 21.6
PRKCA-201ENST00000284384 SCAND2PQ9GZW5 306 aaPredicted RBP9.23□□□□□ -0.93
PRKCA-201ENST00000284384 ZSCAN16Q9H4T2 348 aaPredicted RBP9.23□□□□□ -0.93
PRKCA-201ENST00000284384 MYH14Q7Z406 1995 aaKnown RBP9.23□□□□□ -0.93
PRKCA-201ENST00000284384 MAST3O60307 1309 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 PFKFB2O60825 505 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 FAM163BP0C2L3 166 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 LRRC24Q50LG9 513 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 TTC39AQ5SRH9 613 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 METTL16Q86W50 562 aaKnown RBP9.23□□□□□ -0.93
PRKCA-201ENST00000284384 VGLL2Q8N8G2 317 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 SMARCC2Q8TAQ2 1214 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 APPBP2Q92624 585 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 BEGAINQ9BUH8 593 aa9.23□□□□□ -0.93
PRKCA-201ENST00000284384 MYH13Q9UKX3 1938 aa9.22□□□□□ -0.93
PRKCA-201ENST00000284384 CCDC66A2RUB6 948 aa9.22□□□□□ -0.93
PRKCA-201ENST00000284384 PDGFRBP09619 1106 aa9.22□□□□□ -0.93
PRKCA-201ENST00000284384 UQCRFS1P1P0C7P4 283 aa9.22□□□□□ -0.93
PRKCA-201ENST00000284384 AMPD3Q01432 767 aa9.22□□□□□ -0.93
PRKCA-201ENST00000284384 RASSF7Q02833 373 aa9.22□□□□□ -0.93
PRKCA-201ENST00000284384 GABPB1Q06547 395 aaPredicted RBP9.22□□□□□ -0.93
PRKCA-201ENST00000284384 ZNF274Q96GC6 653 aaPredicted RBP9.22□□□□□ -0.93
PRKCA-201ENST00000284384 ECM29Q5VYK3 1845 aa9.22□□□□□ -0.93
PRKCA-201ENST00000284384 MYO5AQ9Y4I1 1855 aaKnown RBP9.22□□□□□ -0.93
PRKCA-201ENST00000284384 LY75O60449 1722 aa9.22□□□□□ -0.93
PRKCA-201ENST00000284384 LDHCP07864 332 aa9.22□□□□□ -0.93
PRKCA-201ENST00000284384 HSPD1P10809 573 aaKnown RBP9.22□□□□□ -0.93
PRKCA-201ENST00000284384 EXOSC10Q01780 885 aaKnown RBP9.22□□□□□ -0.93
PRKCA-201ENST00000284384 NAA16Q6N069 864 aaPredicted RBP9.22□□□□□ -0.93
PRKCA-201ENST00000284384 TTLL11Q8NHH1 800 aa9.22□□□□□ -0.93
PRKCA-201ENST00000284384 SMARCC1Q92922 1105 aaPredicted RBP9.22□□□□□ -0.93
PRKCA-201ENST00000284384 XAGE2Q96GT9 111 aa9.22□□□□□ -0.93
PRKCA-201ENST00000284384 ZMIZ1Q9ULJ6 1067 aa9.22□□□□□ -0.93
PRKCA-201ENST00000284384 EIF5P55010 431 aaKnown RBP9.21□□□□□ -0.93
PRKCA-201ENST00000284384 MYSM1Q5VVJ2 828 aa9.21□□□□□ -0.93
PRKCA-201ENST00000284384 LARP1BQ659C4 914 aaKnown RBP9.21□□□□□ -0.93
PRKCA-201ENST00000284384 IER2Q9BTL4 223 aa9.21□□□□□ -0.93
PRKCA-201ENST00000284384 FEZ2Q9UHY8 353 aaPredicted RBP9.21□□□□□ -0.93
PRKCA-201ENST00000284384 SPATA31A5Q5VU36 1347 aa9.21□□□□□ -0.93
PRKCA-201ENST00000284384 SPATA31A7Q8IWB4 1347 aa9.21□□□□□ -0.93
PRKCA-201ENST00000284384 SALL1Q9NSC2 1324 aa9.21□□□□□ -0.93
PRKCA-201ENST00000284384 CTIFO43310 598 aaKnown RBP9.21□□□□□ -0.94
PRKCA-201ENST00000284384 TPM3P06753 285 aa9.21□□□□□ -0.94
PRKCA-201ENST00000284384 VDRP11473 427 aa9.21□□□□□ -0.94
PRKCA-201ENST00000284384 CPA1P15085 419 aa9.21□□□□□ -0.94
PRKCA-201ENST00000284384 SF3B2Q13435 895 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms