RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 FBXW7Q969H0 707 aa25.81■■□□□ 1.72
CCDC7-201ENST00000277657 ZSCAN10Q96SZ4 725 aaPredicted RBP25.81■■□□□ 1.72
CCDC7-201ENST00000277657 DBNDD1Q9H9R9 158 aa25.81■■□□□ 1.72
CCDC7-201ENST00000277657 GDPD2Q9HCC8 539 aa25.81■■□□□ 1.72
CCDC7-201ENST00000277657 GOLGA8AA7E2F4 631 aa25.8■■□□□ 1.72
CCDC7-201ENST00000277657 CDKL5O76039 1030 aa25.8■■□□□ 1.72
CCDC7-201ENST00000277657 RXRAP19793 462 aa25.8■■□□□ 1.72
CCDC7-201ENST00000277657 RESTQ13127 1097 aa25.8■■□□□ 1.72
CCDC7-201ENST00000277657 NTRK3Q16288 839 aa25.8■■□□□ 1.72
CCDC7-201ENST00000277657 SYNE3Q6ZMZ3 975 aa25.8■■□□□ 1.72
CCDC7-201ENST00000277657 TEX11Q8IYF3 940 aa25.8■■□□□ 1.72
CCDC7-201ENST00000277657 ZSCAN16Q9H4T2 348 aaPredicted RBP25.8■■□□□ 1.72
CCDC7-201ENST00000277657 ZNF646O15015 1829 aaPredicted RBP25.8■■□□□ 1.72
CCDC7-201ENST00000277657 FOCADQ5VW36 1801 aa25.8■■□□□ 1.72
CCDC7-201ENST00000277657 PPFIA3O75145 1194 aa25.79■■□□□ 1.72
CCDC7-201ENST00000277657 FKBP1AP62942 108 aaKnown RBP25.79■■□□□ 1.72
CCDC7-201ENST00000277657 GRIPAP1Q4V328 841 aa25.79■■□□□ 1.72
CCDC7-201ENST00000277657 IQCA1Q86XH1 822 aa25.79■■□□□ 1.72
CCDC7-201ENST00000277657 TTLL6Q8N841 843 aa25.79■■□□□ 1.72
CCDC7-201ENST00000277657 ENAHQ8N8S7 591 aaPredicted RBP25.79■■□□□ 1.72
CCDC7-201ENST00000277657 MYL10Q9BUA6 226 aa25.79■■□□□ 1.72
CCDC7-201ENST00000277657 ORC3Q9UBD5 711 aaPredicted RBP25.79■■□□□ 1.72
CCDC7-201ENST00000277657 CPLX2Q6PUV4 134 aaKnown RBP25.79■■□□□ 1.72
CCDC7-201ENST00000277657 MAPKAPK5Q8IW41 473 aa25.79■■□□□ 1.72
CCDC7-201ENST00000277657 AMOTL1Q8IY63 956 aa25.79■■□□□ 1.72
CCDC7-201ENST00000277657 RGS22Q8NE09 1264 aa25.79■■□□□ 1.72
CCDC7-201ENST00000277657 MXD3Q9BW11 206 aa25.79■■□□□ 1.72
CCDC7-201ENST00000277657 TTF2Q9UNY4 1162 aaKnown RBP25.79■■□□□ 1.72
CCDC7-201ENST00000277657 SCN9AQ15858 1988 aa25.78■■□□□ 1.72
CCDC7-201ENST00000277657 MBD3O95983 291 aa25.78■■□□□ 1.72
CCDC7-201ENST00000277657 KCNA3P22001 575 aa25.78■■□□□ 1.72
CCDC7-201ENST00000277657 KIAA2012Q0VF49 1180 aa25.78■■□□□ 1.72
CCDC7-201ENST00000277657 STRIP1Q5VSL9 837 aa25.78■■□□□ 1.72
CCDC7-201ENST00000277657 SUPT20HQ8NEM7 779 aa25.78■■□□□ 1.72
CCDC7-201ENST00000277657 ECE2O60344 883 aa25.77■■□□□ 1.72
CCDC7-201ENST00000277657 ZNF654Q8IZM8 581 aa25.77■■□□□ 1.72
CCDC7-201ENST00000277657 FLT1P17948 1338 aa25.77■■□□□ 1.72
CCDC7-201ENST00000277657 C21orf2O43822 256 aa25.77■■□□□ 1.72
CCDC7-201ENST00000277657 KCNQ5Q9NR82 932 aa25.77■■□□□ 1.72
CCDC7-201ENST00000277657 NCLP19338 710 aaKnown RBP25.76■■□□□ 1.71
CCDC7-201ENST00000277657 KRT85P78386 507 aa25.76■■□□□ 1.71
CCDC7-201ENST00000277657 CSPP1Q1MSJ5 1256 aa25.76■■□□□ 1.71
CCDC7-201ENST00000277657 HHIPL2Q6UWX4 724 aa25.76■■□□□ 1.71
CCDC7-201ENST00000277657 CCDC144CPQ8IYA2 1237 aa25.76■■□□□ 1.71
CCDC7-201ENST00000277657 F8W031 263 aaPredicted RBP25.75■■□□□ 1.71
CCDC7-201ENST00000277657 DPEP1P16444 411 aa25.75■■□□□ 1.71
CCDC7-201ENST00000277657 AOC3Q16853 763 aa25.75■■□□□ 1.71
CCDC7-201ENST00000277657 DACT2Q5SW24 774 aa25.75■■□□□ 1.71
CCDC7-201ENST00000277657 FAM173BQ6P4H8 233 aa25.75■■□□□ 1.71
CCDC7-201ENST00000277657 FIBPO43427 364 aa25.74■■□□□ 1.71
CCDC7-201ENST00000277657 GADD45BO75293 160 aaPredicted RBP25.74■■□□□ 1.71
CCDC7-201ENST00000277657 IFNAR1P17181 557 aa25.74■■□□□ 1.71
CCDC7-201ENST00000277657 PLCD1P51178 756 aa25.74■■□□□ 1.71
CCDC7-201ENST00000277657 RTN1Q16799 776 aa25.74■■□□□ 1.71
CCDC7-201ENST00000277657 IFIT1BQ5T764 474 aaKnown RBP25.74■■□□□ 1.71
CCDC7-201ENST00000277657 FBXO18Q8NFZ0 1043 aa25.74■■□□□ 1.71
CCDC7-201ENST00000277657 MRIQ9BWK5 157 aa25.74■■□□□ 1.71
CCDC7-201ENST00000277657 STK36Q9NRP7 1315 aa25.74■■□□□ 1.71
CCDC7-201ENST00000277657 MYH1P12882 1939 aa25.74■■□□□ 1.71
CCDC7-201ENST00000277657 POLR3DP05423 398 aaPredicted RBP25.74■■□□□ 1.71
CCDC7-201ENST00000277657 PPP2R5BQ15173 497 aa25.74■■□□□ 1.71
CCDC7-201ENST00000277657 SLC4A8Q2Y0W8 1093 aa25.74■■□□□ 1.71
CCDC7-201ENST00000277657 FANCBQ8NB91 859 aa25.74■■□□□ 1.71
CCDC7-201ENST00000277657 DYNLL2Q96FJ2 89 aa25.74■■□□□ 1.71
CCDC7-201ENST00000277657 C8orf76Q96K31 380 aa25.74■■□□□ 1.71
CCDC7-201ENST00000277657 SAP30BPQ9UHR5 308 aaKnown RBP25.74■■□□□ 1.71
CCDC7-201ENST00000277657 CCDC196A0A1B0GTZ2 297 aa25.73■■□□□ 1.71
CCDC7-201ENST00000277657 FOSBP53539 338 aa25.73■■□□□ 1.71
CCDC7-201ENST00000277657 CCDC93Q567U6 631 aa25.73■■□□□ 1.71
CCDC7-201ENST00000277657 FAM47AQ5JRC9 791 aa25.73■■□□□ 1.71
CCDC7-201ENST00000277657 RTKN2Q8IZC4 609 aa25.73■■□□□ 1.71
CCDC7-201ENST00000277657 MYH15Q9Y2K3 1946 aa25.73■■□□□ 1.71
CCDC7-201ENST00000277657 USP17L3A6NCW0 530 aa25.72■■□□□ 1.71
CCDC7-201ENST00000277657 USP17L4A6NCW7 530 aa25.72■■□□□ 1.71
CCDC7-201ENST00000277657 IARSP41252 1262 aaKnown RBP25.72■■□□□ 1.71
CCDC7-201ENST00000277657 CAVIN1Q6NZI2 390 aaKnown RBP25.72■■□□□ 1.71
CCDC7-201ENST00000277657 USP17L1Q7RTZ2 530 aa25.72■■□□□ 1.71
CCDC7-201ENST00000277657 PHKBQ93100 1093 aa25.72■■□□□ 1.71
CCDC7-201ENST00000277657 TEKT1Q969V4 418 aa25.72■■□□□ 1.71
CCDC7-201ENST00000277657 PSMD1Q99460 953 aa25.72■■□□□ 1.71
CCDC7-201ENST00000277657 ADAMTSL1Q8N6G6 1762 aa25.72■■□□□ 1.71
CCDC7-201ENST00000277657 ECM29Q5VYK3 1845 aa25.72■■□□□ 1.71
CCDC7-201ENST00000277657 TSPY2A6NKD2 308 aa25.72■■□□□ 1.71
CCDC7-201ENST00000277657 UBE2HP62256 183 aa25.72■■□□□ 1.71
CCDC7-201ENST00000277657 ELP1O95163 1332 aa25.72■■□□□ 1.71
CCDC7-201ENST00000277657 ZBTB7AO95365 584 aa25.71■■□□□ 1.71
CCDC7-201ENST00000277657 FMNL1O95466 1100 aaPredicted RBP25.71■■□□□ 1.71
CCDC7-201ENST00000277657 SCNN1DP51172 638 aa25.71■■□□□ 1.71
CCDC7-201ENST00000277657 GUCY1B3Q02153 619 aa25.71■■□□□ 1.71
CCDC7-201ENST00000277657 C16orf86Q6ZW13 317 aa25.71■■□□□ 1.71
CCDC7-201ENST00000277657 CATIPQ7Z7H3 387 aa25.71■■□□□ 1.71
CCDC7-201ENST00000277657 SCAND2PQ9GZW5 306 aaPredicted RBP25.71■■□□□ 1.71
CCDC7-201ENST00000277657 NMT2O60551 498 aa25.7■■□□□ 1.71
CCDC7-201ENST00000277657 HDLBPQ00341 1268 aaKnown RBP25.7■■□□□ 1.71
CCDC7-201ENST00000277657 TROAPQ12815 778 aa25.7■■□□□ 1.71
CCDC7-201ENST00000277657 APOBEC3HQ6NTF7 200 aaKnown RBP25.7■■□□□ 1.71
CCDC7-201ENST00000277657 MTFR1LQ9H019 292 aa25.7■■□□□ 1.71
CCDC7-201ENST00000277657 MKNK2Q9HBH9 465 aa25.7■■□□□ 1.71
CCDC7-201ENST00000277657 PPIP5K2O43314 1243 aa25.7■■□□□ 1.7
CCDC7-201ENST00000277657 WDHD1O75717 1129 aaPredicted RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms