RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 GNL3LQ9NVN8 582 aaKnown RBP12.94□□□□□ -0.34
SKP2-202ENST00000274255 ZSWIM5Q9P217 1185 aa12.94□□□□□ -0.34
SKP2-202ENST00000274255 ASAP1Q9ULH1 1129 aa12.94□□□□□ -0.34
SKP2-202ENST00000274255 N4BP1O75113 896 aaKnown RBP12.94□□□□□ -0.34
SKP2-202ENST00000274255 HOXB7P09629 217 aa12.94□□□□□ -0.34
SKP2-202ENST00000274255 E2F4Q16254 413 aa12.94□□□□□ -0.34
SKP2-202ENST00000274255 RIN2Q8WYP3 895 aaPredicted RBP12.94□□□□□ -0.34
SKP2-202ENST00000274255 CDK5RAP3Q96JB5 506 aa12.94□□□□□ -0.34
SKP2-202ENST00000274255 CYP27B1O15528 508 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 CYP27A1Q02318 531 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 FMR1Q06787 632 aaKnown RBP eCLIP12.93□□□□□ -0.34
SKP2-202ENST00000274255 HLTFQ14527 1009 aaKnown RBP eCLIP12.93□□□□□ -0.34
SKP2-202ENST00000274255 CATIPQ7Z7H3 387 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 HDAC6Q9UBN7 1215 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 HGSO14964 777 aaPredicted RBP12.93□□□□□ -0.34
SKP2-202ENST00000274255 AKR1B10O60218 316 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 IGHMBP2P38935 993 aaKnown RBP12.93□□□□□ -0.34
SKP2-202ENST00000274255 IQCA1Q86XH1 822 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 TXLNBQ8N3L3 684 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 UBA5Q9GZZ9 404 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 MROH7-TTC4A0A0A0MT08 1334 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 STAT6P42226 847 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 EPS15P42566 896 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 HEATR3Q7Z4Q2 680 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 NBPF11Q86T75 865 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 WASF1Q92558 559 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 DCAF5Q96JK2 942 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 MKNK2Q9HBH9 465 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 SEC31BQ9NQW1 1179 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 SEPT11Q9NVA2 429 aaKnown RBP12.93□□□□□ -0.34
SKP2-202ENST00000274255 IMPACTQ9P2X3 320 aa12.93□□□□□ -0.34
SKP2-202ENST00000274255 CCDC194A0A1B0GVG4 234 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 PDE6AP16499 860 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 CPVLQ9H3G5 476 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 TRIM10Q9UDY6 481 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 MAN1B1Q9UKM7 699 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 NOSTRINQ8IVI9 506 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 GPKOWQ92917 476 aaPredicted RBP eCLIP12.92□□□□□ -0.34
SKP2-202ENST00000274255 SIRT1Q96EB6 747 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 PIH1D3Q9NQM4 214 aaKnown RBP12.92□□□□□ -0.34
SKP2-202ENST00000274255 CEP170BQ9Y4F5 1589 aaPredicted RBP12.92□□□□□ -0.34
SKP2-202ENST00000274255 MORC2Q9Y6X9 1032 aaPredicted RBP12.92□□□□□ -0.34
SKP2-202ENST00000274255 SYNRGQ9UMZ2 1314 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 ATP1A2P50993 1020 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 KCTD16Q68DU8 428 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 CACNA2D4Q7Z3S7 1137 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 CCDC47Q96A33 483 aaKnown RBP12.92□□□□□ -0.34
SKP2-202ENST00000274255 RASSF4Q9H2L5 321 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 ABCB6Q9NP58 842 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 ZNF446Q9NWS9 450 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 TFCP2L1Q9NZI6 479 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 CEP131Q9UPN4 1083 aa12.92□□□□□ -0.34
SKP2-202ENST00000274255 SMIM22K7EJ46 135 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 KRT18P05783 430 aaKnown RBP12.91□□□□□ -0.34
SKP2-202ENST00000274255 ZFYP08048 801 aaPredicted RBP12.91□□□□□ -0.34
SKP2-202ENST00000274255 SLC5A1P13866 664 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 MNAT1P51948 309 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 A2ML1A8K2U0 1454 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 NBPF26B4DH59 902 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 MCAMP43121 646 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 GYG1P46976 350 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 EIF6P56537 245 aaKnown RBP12.91□□□□□ -0.34
SKP2-202ENST00000274255 IKQ13123 557 aaPredicted RBP12.91□□□□□ -0.34
SKP2-202ENST00000274255 SPA17Q15506 151 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 NBPF14Q5TI25 921 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 NBPF10Q6P3W6 841 aaKnown RBP12.91□□□□□ -0.34
SKP2-202ENST00000274255 TAX1BP1Q86VP1 789 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 NBPF15Q8N660 670 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 TBC1D7Q9P0N9 293 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 ADAM21Q9UKJ8 722 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 CCDC196A0A1B0GTZ2 297 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 ENGASEQ8NFI3 743 aa12.91□□□□□ -0.34
SKP2-202ENST00000274255 MRPL44Q9H9J2 332 aaKnown RBP12.91□□□□□ -0.34
SKP2-202ENST00000274255 FAM207AQ9NSI2 230 aaPredicted RBP12.91□□□□□ -0.34
SKP2-202ENST00000274255 SMIM23A6NLE4 172 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 ASIC1P78348 528 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 STIM1Q13586 685 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 ILDR1Q86SU0 546 aaPredicted RBP12.9□□□□□ -0.34
SKP2-202ENST00000274255 METTL16Q86W50 562 aaKnown RBP12.9□□□□□ -0.34
SKP2-202ENST00000274255 SYMPKQ92797 1274 aaKnown RBP12.9□□□□□ -0.34
SKP2-202ENST00000274255 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.9□□□□□ -0.34
SKP2-202ENST00000274255 CCDC113Q9H0I3 377 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 NEXMIFQ5QGS0 1516 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 MLH3Q9UHC1 1453 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 CUTAO60888 179 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 GOLGA8HP0CJ92 632 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 LIG3P49916 1009 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 PDIA6Q15084 440 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 DYMQ7RTS9 669 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 IFNL3Q8IZI9 196 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 SMARCC2Q8TAQ2 1214 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 LUC7L2Q9Y383 392 aaKnown RBP12.9□□□□□ -0.34
SKP2-202ENST00000274255 SAMM50Q9Y512 469 aa12.9□□□□□ -0.34
SKP2-202ENST00000274255 PLA2G4AP47712 749 aa12.9□□□□□ -0.35
SKP2-202ENST00000274255 HLFQ16534 295 aa12.9□□□□□ -0.35
SKP2-202ENST00000274255 NYAP1Q6ZVC0 841 aa12.9□□□□□ -0.35
SKP2-202ENST00000274255 VSTM4Q8IW00 320 aa12.9□□□□□ -0.35
SKP2-202ENST00000274255 TRIM49BA6NDI0 452 aa12.89□□□□□ -0.35
SKP2-202ENST00000274255 HPDP32754 393 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms