RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 LDHBP07195 334 aaKnown RBP11.15□□□□□ -0.62
TPM3-201ENST00000271850 RGS3P49796 1198 aa11.15□□□□□ -0.62
TPM3-201ENST00000271850 RHBDL3P58872 404 aa11.15□□□□□ -0.62
TPM3-201ENST00000271850 MAP3K10Q02779 954 aa11.15□□□□□ -0.62
TPM3-201ENST00000271850 MTX1Q13505 466 aa11.15□□□□□ -0.62
TPM3-201ENST00000271850 MTFR1Q15390 333 aa11.15□□□□□ -0.62
TPM3-201ENST00000271850 PI16Q6UXB8 463 aa11.15□□□□□ -0.62
TPM3-201ENST00000271850 ANKRD23Q86SG2 305 aa11.15□□□□□ -0.62
TPM3-201ENST00000271850 CCDC84Q86UT8 332 aaPredicted RBP11.15□□□□□ -0.62
TPM3-201ENST00000271850 IDI2Q9BXS1 227 aa11.15□□□□□ -0.62
TPM3-201ENST00000271850 LAMA3Q16787 3333 aa11.14□□□□□ -0.63
TPM3-201ENST00000271850 A0A1B0GUL7 405 aa11.14□□□□□ -0.63
TPM3-201ENST00000271850 SEMA3EO15041 775 aa11.14□□□□□ -0.63
TPM3-201ENST00000271850 CT47B1P0C2W7 299 aaPredicted RBP11.14□□□□□ -0.63
TPM3-201ENST00000271850 CYP2C8P10632 490 aa11.14□□□□□ -0.63
TPM3-201ENST00000271850 BCRP11274 1271 aa11.14□□□□□ -0.63
TPM3-201ENST00000271850 TFCP2Q12800 502 aa11.14□□□□□ -0.63
TPM3-201ENST00000271850 SLC9C1Q4G0N8 1177 aa11.14□□□□□ -0.63
TPM3-201ENST00000271850 HABP4Q5JVS0 413 aaKnown RBP11.14□□□□□ -0.63
TPM3-201ENST00000271850 API5Q9BZZ5 524 aaKnown RBP11.14□□□□□ -0.63
TPM3-201ENST00000271850 DENND2AQ9ULE3 1009 aa11.14□□□□□ -0.63
TPM3-201ENST00000271850 SIPA1L1O43166 1804 aa11.14□□□□□ -0.63
TPM3-201ENST00000271850 PDS5AQ29RF7 1337 aaKnown RBP11.13□□□□□ -0.63
TPM3-201ENST00000271850 DOCK1Q14185 1865 aa11.13□□□□□ -0.63
TPM3-201ENST00000271850 PNMA6EA0A0J9YXQ4 647 aa11.13□□□□□ -0.63
TPM3-201ENST00000271850 TRIM27P14373 513 aa11.13□□□□□ -0.63
TPM3-201ENST00000271850 PTPRAP18433 802 aa11.13□□□□□ -0.63
TPM3-201ENST00000271850 OSBPP22059 807 aa11.13□□□□□ -0.63
TPM3-201ENST00000271850 PBX2P40425 430 aa11.13□□□□□ -0.63
TPM3-201ENST00000271850 RRP1BQ14684 758 aaKnown RBP11.13□□□□□ -0.63
TPM3-201ENST00000271850 XAGE2Q96GT9 111 aa11.13□□□□□ -0.63
TPM3-201ENST00000271850 AK9Q5TCS8 1911 aa11.13□□□□□ -0.63
TPM3-201ENST00000271850 MROH7-TTC4A0A0A0MT08 1334 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 A0A0G2JLL6 359 aaPredicted RBP11.12□□□□□ -0.63
TPM3-201ENST00000271850 FAM196BA6NMK8 535 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 SRGAP3O43295 1099 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 ENTPD3O75355 529 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 BCAR3O75815 825 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 BTDP43251 543 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 PSMC4P43686 418 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 MECOMQ03112 1051 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 PRRT2Q7Z6L0 340 aaPredicted RBP11.12□□□□□ -0.63
TPM3-201ENST00000271850 UBE2Q1Q7Z7E8 422 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 SCYL3Q8IZE3 742 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 HOOK2Q96ED9 719 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 HMG20BQ9P0W2 317 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 SRRDQ9UH36 339 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 GABRQQ9UN88 632 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 AFG3L2Q9Y4W6 797 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 MGAMO43451 1857 aa11.12□□□□□ -0.63
TPM3-201ENST00000271850 GPR75-ASB3A0A0A6YYF3 556 aa11.11□□□□□ -0.63
TPM3-201ENST00000271850 PRKCZQ05513 592 aa11.11□□□□□ -0.63
TPM3-201ENST00000271850 TBC1D9Q6ZT07 1266 aa11.11□□□□□ -0.63
TPM3-201ENST00000271850 ARHGAP45Q92619 1136 aa11.11□□□□□ -0.63
TPM3-201ENST00000271850 KHSRPQ92945 711 aaKnown RBP eCLIP11.11□□□□□ -0.63
TPM3-201ENST00000271850 NSUN4Q96CB9 384 aaKnown RBP11.11□□□□□ -0.63
TPM3-201ENST00000271850 GNL3LQ9NVN8 582 aaKnown RBP11.11□□□□□ -0.63
TPM3-201ENST00000271850 ABCF2Q9UG63 623 aa11.11□□□□□ -0.63
TPM3-201ENST00000271850 TRIOBPQ9H2D6 2365 aa11.11□□□□□ -0.63
TPM3-201ENST00000271850 CXCL11O14625 94 aa11.1□□□□□ -0.63
TPM3-201ENST00000271850 ARID4AP29374 1257 aaPredicted RBP11.1□□□□□ -0.63
TPM3-201ENST00000271850 MCAMP43121 646 aa11.1□□□□□ -0.63
TPM3-201ENST00000271850 FXR1P51114 621 aaKnown RBP eCLIP11.1□□□□□ -0.63
TPM3-201ENST00000271850 PICALMQ13492 652 aa11.1□□□□□ -0.63
TPM3-201ENST00000271850 SLC4A8Q2Y0W8 1093 aa11.1□□□□□ -0.63
TPM3-201ENST00000271850 TAOK2Q9UL54 1235 aa11.1□□□□□ -0.63
TPM3-201ENST00000271850 ZHX2Q9Y6X8 837 aa11.1□□□□□ -0.63
TPM3-201ENST00000271850 MYPNQ86TC9 1320 aa11.09□□□□□ -0.63
TPM3-201ENST00000271850 LOC285556D6RIA3 1793 aa11.09□□□□□ -0.63
TPM3-201ENST00000271850 GNRH1P01148 92 aa11.09□□□□□ -0.63
TPM3-201ENST00000271850 JAG1P78504 1218 aa11.09□□□□□ -0.63
TPM3-201ENST00000271850 SHROOM1Q2M3G4 852 aaPredicted RBP11.09□□□□□ -0.63
TPM3-201ENST00000271850 TREML2Q5T2D2 321 aa11.09□□□□□ -0.63
TPM3-201ENST00000271850 ADGRA1Q86SQ6 560 aa11.09□□□□□ -0.63
TPM3-201ENST00000271850 NBPF11Q86T75 865 aa11.09□□□□□ -0.63
TPM3-201ENST00000271850 DZIP1Q86YF9 867 aaKnown RBP11.09□□□□□ -0.63
TPM3-201ENST00000271850 PARK7Q99497 189 aaKnown RBP11.09□□□□□ -0.63
TPM3-201ENST00000271850 DOCK3Q8IZD9 2030 aa11.09□□□□□ -0.63
TPM3-201ENST00000271850 MYO5AQ9Y4I1 1855 aaKnown RBP11.08□□□□□ -0.64
TPM3-201ENST00000271850 COL2A1P02458 1487 aaPredicted RBP11.08□□□□□ -0.64
TPM3-201ENST00000271850 H0YGN5 161 aa11.08□□□□□ -0.64
TPM3-201ENST00000271850 CCER2I3L3R5 266 aa11.08□□□□□ -0.64
TPM3-201ENST00000271850 GNAI3P08754 354 aa11.08□□□□□ -0.64
TPM3-201ENST00000271850 GRK4P32298 578 aa11.08□□□□□ -0.64
TPM3-201ENST00000271850 PRMT2P55345 433 aa11.08□□□□□ -0.64
TPM3-201ENST00000271850 KIF22Q14807 665 aa11.08□□□□□ -0.64
TPM3-201ENST00000271850 ARHGEF6Q15052 776 aa11.08□□□□□ -0.64
TPM3-201ENST00000271850 ATF7IPQ6VMQ6 1270 aa11.08□□□□□ -0.64
TPM3-201ENST00000271850 ZGPATQ8N5A5 531 aaKnown RBP11.08□□□□□ -0.64
TPM3-201ENST00000271850 TMEM57Q8N5G2 664 aa11.08□□□□□ -0.64
TPM3-201ENST00000271850 SPATA5Q8NB90 893 aa11.08□□□□□ -0.64
TPM3-201ENST00000271850 CLUAP1Q96AJ1 413 aa11.08□□□□□ -0.64
TPM3-201ENST00000271850 RNF25Q96BH1 459 aaPredicted RBP11.08□□□□□ -0.64
TPM3-201ENST00000271850 DNAJC18Q9H819 358 aa11.08□□□□□ -0.64
TPM3-201ENST00000271850 CDK5RAP2Q96SN8 1893 aa11.08□□□□□ -0.64
TPM3-201ENST00000271850 ATAD5Q96QE3 1844 aa11.07□□□□□ -0.64
TPM3-201ENST00000271850 TRIM75PA6NK02 468 aa11.07□□□□□ -0.64
TPM3-201ENST00000271850 TBC1D12O60347 775 aa11.07□□□□□ -0.64
TPM3-201ENST00000271850 CTNND1O60716 968 aaKnown RBP11.07□□□□□ -0.64
TPM3-201ENST00000271850 FMNL1O95466 1100 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms