RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 SLC4A8Q2Y0W8 1093 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 METTL16Q86W50 562 aaKnown RBP10.17□□□□□ -0.78
ERCC8-201ENST00000265038 FOXP4Q8IVH2 680 aaPredicted RBP10.17□□□□□ -0.78
ERCC8-201ENST00000265038 PLEKHM2Q8IWE5 1019 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 OSBP2Q969R2 916 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 CRNKL1Q9BZJ0 848 aaKnown RBP10.17□□□□□ -0.78
ERCC8-201ENST00000265038 DNAJC18Q9H819 358 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 IRF6O14896 467 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 CTNND1O60716 968 aaKnown RBP10.17□□□□□ -0.78
ERCC8-201ENST00000265038 INHBEP58166 350 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 PPATQ06203 517 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 SCYL3Q8IZE3 742 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 SDR42E1Q8WUS8 393 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 PTPN18Q99952 460 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 SAGE1Q9NXZ1 904 aa10.17□□□□□ -0.78
ERCC8-201ENST00000265038 HERC5Q9UII4 1024 aaKnown RBP10.17□□□□□ -0.78
ERCC8-201ENST00000265038 MAST2Q6P0Q8 1798 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 IGF2BP3O00425 579 aaKnown RBP eCLIP10.16□□□□□ -0.78
ERCC8-201ENST00000265038 PPIL2Q13356 520 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 COL13A1Q5TAT6 717 aaPredicted RBP10.16□□□□□ -0.78
ERCC8-201ENST00000265038 IFNL1Q8IU54 200 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 BRI3BPQ8WY22 251 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 APPBP2Q92624 585 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 DCP1AQ9NPI6 582 aaPredicted RBP10.16□□□□□ -0.78
ERCC8-201ENST00000265038 HLA-DOAP06340 250 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 ZFYP08048 801 aaPredicted RBP10.16□□□□□ -0.78
ERCC8-201ENST00000265038 PTPRAP18433 802 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 CAP2P40123 477 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 PLCD1P51178 756 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 GTF2A2P52657 109 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 JAG1P78504 1218 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 EVX2Q03828 476 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 EVI5LQ96CN4 794 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 STRBPQ96SI9 672 aaKnown RBP10.16□□□□□ -0.78
ERCC8-201ENST00000265038 OSBPL3Q9H4L5 887 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 PRDM10Q9NQV6 1147 aa10.16□□□□□ -0.78
ERCC8-201ENST00000265038 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.16□□□□□ -0.78
ERCC8-201ENST00000265038 CCL15-CCL14A0A0B4J2E2 113 aa10.15□□□□□ -0.78
ERCC8-201ENST00000265038 TBC1D8O95759 1140 aa10.15□□□□□ -0.78
ERCC8-201ENST00000265038 PDE4AP27815 886 aa10.15□□□□□ -0.78
ERCC8-201ENST00000265038 CCL15Q16663 113 aa10.15□□□□□ -0.78
ERCC8-201ENST00000265038 TTC6Q86TZ1 520 aa10.15□□□□□ -0.78
ERCC8-201ENST00000265038 CCDC84Q86UT8 332 aaPredicted RBP10.15□□□□□ -0.78
ERCC8-201ENST00000265038 FSD1Q9BTV5 496 aa10.15□□□□□ -0.78
ERCC8-201ENST00000265038 R3HDMLQ9H3Y0 253 aa10.15□□□□□ -0.78
ERCC8-201ENST00000265038 MCM9Q9NXL9 1143 aa10.15□□□□□ -0.78
ERCC8-201ENST00000265038 KCNH4Q9UQ05 1017 aa10.15□□□□□ -0.78
ERCC8-201ENST00000265038 ZHX2Q9Y6X8 837 aa10.15□□□□□ -0.78
ERCC8-201ENST00000265038 DOCK2Q92608 1830 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 M0R2C6 588 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 POLR3DP05423 398 aaPredicted RBP10.14□□□□□ -0.79
ERCC8-201ENST00000265038 CYP2D6P10635 497 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 SNAPC2Q13487 334 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 ZMYM1Q5SVZ6 1142 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 CRACR2BQ8N4Y2 399 aaPredicted RBP10.14□□□□□ -0.79
ERCC8-201ENST00000265038 SEC62Q99442 399 aaKnown RBP10.14□□□□□ -0.79
ERCC8-201ENST00000265038 EHD4Q9H223 541 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 PICK1Q9NRD5 415 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 ATP8A2Q9NTI2 1148 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 AFG3L2Q9Y4W6 797 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 SLC4A4Q9Y6R1 1079 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 MYO5AQ9Y4I1 1855 aaKnown RBP10.14□□□□□ -0.79
ERCC8-201ENST00000265038 CETPP11597 493 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 GABPAQ06546 454 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 MOGSQ13724 837 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 SHROOM1Q2M3G4 852 aaPredicted RBP10.14□□□□□ -0.79
ERCC8-201ENST00000265038 LRRFIP1Q32MZ4 808 aaKnown RBP10.14□□□□□ -0.79
ERCC8-201ENST00000265038 TATDN1Q6P1N9 297 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 FAM43AQ8N2R8 423 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 CFHR5Q9BXR6 569 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 SERPINB13Q9UIV8 391 aa10.14□□□□□ -0.79
ERCC8-201ENST00000265038 GSG1L2A8MUP6 293 aa10.13□□□□□ -0.79
ERCC8-201ENST00000265038 BTBD19C9JJ37 291 aa10.13□□□□□ -0.79
ERCC8-201ENST00000265038 SMIM22K7EJ46 135 aa10.13□□□□□ -0.79
ERCC8-201ENST00000265038 CXCL11O14625 94 aa10.13□□□□□ -0.79
ERCC8-201ENST00000265038 GPAA1O43292 621 aa10.13□□□□□ -0.79
ERCC8-201ENST00000265038 ALDH1A1P00352 501 aa10.13□□□□□ -0.79
ERCC8-201ENST00000265038 TRIM34Q9BYJ4 488 aa10.13□□□□□ -0.79
ERCC8-201ENST00000265038 CYP2D7A0A087X1C5 515 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 USP17L12C9JPN9 530 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 USP17L21D6R901 530 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 GDF11O95390 407 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 SHMT1P34896 483 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 CTR9Q6PD62 1173 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 DYNLL2Q96FJ2 89 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 FOXD4L1Q9NU39 408 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 PCNTO95613 3336 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 USP17L5A8MUK1 530 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 TRIM6-TRIM34B2RNG4 842 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 C12orf60Q5U649 245 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 OTUD7BQ6GQQ9 843 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 GPAT2Q6NUI2 795 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 RILPL2Q969X0 211 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 EPB41L4AQ9HCS5 686 aaPredicted RBP10.12□□□□□ -0.79
ERCC8-201ENST00000265038 OTOFQ9HC10 1997 aa10.12□□□□□ -0.79
ERCC8-201ENST00000265038 A0A0G2JLL6 359 aaPredicted RBP10.11□□□□□ -0.79
ERCC8-201ENST00000265038 TRIM75PA6NK02 468 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 PATL2C9JE40 543 aaKnown RBP10.11□□□□□ -0.79
ERCC8-201ENST00000265038 GPR25O00155 361 aa10.11□□□□□ -0.79
ERCC8-201ENST00000265038 GNAT2P19087 354 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms