RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 C1orf167Q5SNV9 1468 aa14.16□□□□□ -0.14
CHMP3-201ENST00000263856 NWD2Q9ULI1 1742 aa14.16□□□□□ -0.14
CHMP3-201ENST00000263856 IRS4O14654 1257 aaPredicted RBP14.16□□□□□ -0.14
CHMP3-201ENST00000263856 WTAPQ15007 396 aa14.16□□□□□ -0.14
CHMP3-201ENST00000263856 RAI14Q9P0K7 980 aa14.16□□□□□ -0.14
CHMP3-201ENST00000263856 PCDH11XQ9BZA7 1347 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 PCDH11YQ9BZA8 1340 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 SASH3O75995 380 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 IFNL3Q8IZI9 196 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 TC2NQ8N9U0 490 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 IGDCC4Q8TDY8 1250 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 CSRNP2Q9H175 543 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 MRPL44Q9H9J2 332 aaKnown RBP14.15□□□□□ -0.14
CHMP3-201ENST00000263856 ARFGAP3Q9NP61 516 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 SEC31BQ9NQW1 1179 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 ABCF2Q9UG63 623 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 HNRNPH2P55795 449 aaKnown RBP14.15□□□□□ -0.14
CHMP3-201ENST00000263856 DHX8Q14562 1220 aaKnown RBP14.15□□□□□ -0.14
CHMP3-201ENST00000263856 TAF3Q5VWG9 929 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 EPSTI1Q96J88 318 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 PARD6BQ9BYG5 372 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 KCND1Q9NSA2 647 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 VPS54Q9P1Q0 977 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 SLC4A4Q9Y6R1 1079 aa14.15□□□□□ -0.14
CHMP3-201ENST00000263856 RHOXF2BP0C7M4 288 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 TOB1P50616 345 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-201ENST00000263856 SMC1AQ14683 1233 aaKnown RBP14.14□□□□□ -0.15
CHMP3-201ENST00000263856 KIF4BQ2VIQ3 1234 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 SLC4A8Q2Y0W8 1093 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.14□□□□□ -0.15
CHMP3-201ENST00000263856 BBXQ8WY36 941 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-201ENST00000263856 TMEM87BQ96K49 555 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 RHOXF2Q9BQY4 288 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 ISCA1Q9BUE6 129 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 EPB41L4AQ9HCS5 686 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-201ENST00000263856 FAM217BQ9NTX9 383 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-201ENST00000263856 MAPK8IP1Q9UQF2 711 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 SART3Q15020 963 aaKnown RBP14.14□□□□□ -0.15
CHMP3-201ENST00000263856 TTF1Q15361 905 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-201ENST00000263856 NTRK3Q16288 839 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 SKIDA1Q1XH10 827 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 ZNF569Q5MCW4 686 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 IGSF22Q8N9C0 903 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 ZBTB38Q8NAP3 1195 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-201ENST00000263856 TTLL11Q8NHH1 800 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 SRRTQ9BXP5 876 aaKnown RBP14.14□□□□□ -0.15
CHMP3-201ENST00000263856 CALCOCO1Q9P1Z2 691 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 SMIM22K7EJ46 135 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 LMAN1P49257 510 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 TMEM139Q8IV31 216 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 UBAC1Q9BSL1 405 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 ATG3Q9NT62 314 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 DACH1Q9UI36 760 aa14.14□□□□□ -0.15
CHMP3-201ENST00000263856 MMP1P03956 469 aa14.13□□□□□ -0.15
CHMP3-201ENST00000263856 WWC2Q6AWC2 1192 aa14.13□□□□□ -0.15
CHMP3-201ENST00000263856 CC2D1AQ6P1N0 951 aaPredicted RBP14.13□□□□□ -0.15
CHMP3-201ENST00000263856 SDR42E1Q8WUS8 393 aa14.13□□□□□ -0.15
CHMP3-201ENST00000263856 STRBPQ96SI9 672 aaKnown RBP14.13□□□□□ -0.15
CHMP3-201ENST00000263856 MPHOSPH8Q99549 860 aa14.13□□□□□ -0.15
CHMP3-201ENST00000263856 BLZF1Q9H2G9 400 aa14.13□□□□□ -0.15
CHMP3-201ENST00000263856 LRP2BPQ9P2M1 347 aa14.13□□□□□ -0.15
CHMP3-201ENST00000263856 MTMR7Q9Y216 660 aa14.13□□□□□ -0.15
CHMP3-201ENST00000263856 RIPOR2Q9Y4F9 1068 aa14.13□□□□□ -0.15
CHMP3-201ENST00000263856 AKR1B15C9JRZ8 316 aaPredicted RBP14.13□□□□□ -0.15
CHMP3-201ENST00000263856 PHACTR2O75167 634 aa14.13□□□□□ -0.15
CHMP3-201ENST00000263856 PCCAP05165 728 aaPredicted RBP14.13□□□□□ -0.15
CHMP3-201ENST00000263856 CCDC175P0C221 793 aa14.13□□□□□ -0.15
CHMP3-201ENST00000263856 RBL2Q08999 1139 aa14.13□□□□□ -0.15
CHMP3-201ENST00000263856 NUTM2AQ8IVF1 878 aaPredicted RBP14.13□□□□□ -0.15
CHMP3-201ENST00000263856 FBXL16Q8N461 479 aa14.13□□□□□ -0.15
CHMP3-201ENST00000263856 GOLGA1Q92805 767 aa14.13□□□□□ -0.15
CHMP3-201ENST00000263856 KCNJ6P48051 423 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 MAP3K12Q12852 859 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 LCORLQ8N3X6 602 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 TEX13AQ9BXU3 409 aaPredicted RBP14.12□□□□□ -0.15
CHMP3-201ENST00000263856 STX10O60499 249 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 PDE8BO95263 885 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 CTSWP56202 376 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 ZNF174Q15697 407 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 ACRBPQ8NEB7 543 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 WASF1Q92558 559 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 FBXO2Q9UK22 296 aaPredicted RBP14.12□□□□□ -0.15
CHMP3-201ENST00000263856 MRFAP1Q9Y605 127 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 ZRANB2O95218 330 aaKnown RBP eCLIP14.12□□□□□ -0.15
CHMP3-201ENST00000263856 FMNL1O95466 1100 aaPredicted RBP14.12□□□□□ -0.15
CHMP3-201ENST00000263856 TBC1D8O95759 1140 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 TUBB4AP04350 444 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 AKNAD1Q5T1N1 836 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 VPS16Q9H269 839 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 CTNND2Q9UQB3 1225 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 TACC3Q9Y6A5 838 aa14.12□□□□□ -0.15
CHMP3-201ENST00000263856 MYO5AQ9Y4I1 1855 aaKnown RBP14.12□□□□□ -0.15
CHMP3-201ENST00000263856 SYNRGQ9UMZ2 1314 aa14.11□□□□□ -0.15
CHMP3-201ENST00000263856 KIF5CO60282 957 aa14.11□□□□□ -0.15
CHMP3-201ENST00000263856 IL2RBP14784 551 aa14.11□□□□□ -0.15
CHMP3-201ENST00000263856 CDC25AP30304 524 aa14.11□□□□□ -0.15
CHMP3-201ENST00000263856 CYP2C19P33261 490 aa14.11□□□□□ -0.15
CHMP3-201ENST00000263856 CHMP4BP1P59074 171 aa14.11□□□□□ -0.15
CHMP3-201ENST00000263856 MLKLQ8NB16 471 aa14.11□□□□□ -0.15
CHMP3-201ENST00000263856 SPATA5Q8NB90 893 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms