RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 PPP6R2O75170 966 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 AFMP43652 599 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 RASGRF1Q13972 1273 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 TEX35Q5T0J7 233 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 OLFM4Q6UX06 510 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 IFNL3Q8IZI9 196 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 MNS1Q8NEH6 495 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 UBXN4Q92575 508 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.98■□□□□ 0.63
ZNF541-201ENST00000263351 TRMT112Q9UI30 125 aaKnown RBP18.98■□□□□ 0.63
ZNF541-201ENST00000263351 TNS3Q68CZ2 1445 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 WDR17Q8IZU2 1322 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 TADA3O75528 432 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 KIF6Q6ZMV9 814 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 NOSTRINQ8IVI9 506 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 TMOD3Q9NYL9 352 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 ZBTB1Q9Y2K1 713 aa18.98■□□□□ 0.63
ZNF541-201ENST00000263351 A0A0G2JS52 829 aa18.97■□□□□ 0.63
ZNF541-201ENST00000263351 ERVV-2B6SEH9 535 aa18.97■□□□□ 0.63
ZNF541-201ENST00000263351 CDK11BP21127 795 aaKnown RBP18.97■□□□□ 0.63
ZNF541-201ENST00000263351 CTSWP56202 376 aa18.97■□□□□ 0.63
ZNF541-201ENST00000263351 TRIM29Q14134 588 aa18.97■□□□□ 0.63
ZNF541-201ENST00000263351 EPSTI1Q96J88 318 aa18.97■□□□□ 0.63
ZNF541-201ENST00000263351 NAPBQ9H115 298 aa18.97■□□□□ 0.63
ZNF541-201ENST00000263351 FBXO2Q9UK22 296 aaPredicted RBP18.97■□□□□ 0.63
ZNF541-201ENST00000263351 CYP2D7A0A087X1C5 515 aa18.97■□□□□ 0.63
ZNF541-201ENST00000263351 IL2RBP14784 551 aa18.97■□□□□ 0.63
ZNF541-201ENST00000263351 POSTNQ15063 836 aa18.97■□□□□ 0.63
ZNF541-201ENST00000263351 KRI1Q8N9T8 703 aaKnown RBP18.97■□□□□ 0.63
ZNF541-201ENST00000263351 BAG1Q99933 345 aaPredicted RBP18.97■□□□□ 0.63
ZNF541-201ENST00000263351 CABP5Q9NP86 173 aa18.97■□□□□ 0.63
ZNF541-201ENST00000263351 LZTFL1Q9NQ48 299 aa18.97■□□□□ 0.63
ZNF541-201ENST00000263351 PDE8BO95263 885 aa18.96■□□□□ 0.63
ZNF541-201ENST00000263351 SSRP1Q08945 709 aaKnown RBP18.96■□□□□ 0.63
ZNF541-201ENST00000263351 SDR42E1Q8WUS8 393 aa18.96■□□□□ 0.63
ZNF541-201ENST00000263351 TIGD1Q96MW7 591 aa18.96■□□□□ 0.63
ZNF541-201ENST00000263351 CD44P16070 742 aaKnown RBP18.96■□□□□ 0.63
ZNF541-201ENST00000263351 DHX58Q96C10 678 aa18.96■□□□□ 0.63
ZNF541-201ENST00000263351 CSRNP2Q9H175 543 aa18.96■□□□□ 0.63
ZNF541-201ENST00000263351 SPEF2Q9C093 1822 aa18.96■□□□□ 0.63
ZNF541-201ENST00000263351 GOLGB1Q14789 3259 aaKnown RBP18.95■□□□□ 0.62
ZNF541-201ENST00000263351 ANKRD18BA2A2Z9 1011 aa18.95■□□□□ 0.62
ZNF541-201ENST00000263351 GSG1L2A8MUP6 293 aa18.95■□□□□ 0.62
ZNF541-201ENST00000263351 KIF2AO00139 706 aaPredicted RBP18.95■□□□□ 0.62
ZNF541-201ENST00000263351 ADAMTS3O15072 1205 aa18.95■□□□□ 0.62
ZNF541-201ENST00000263351 BCAMP50895 628 aa18.95■□□□□ 0.62
ZNF541-201ENST00000263351 ST5P78524 1137 aa18.95■□□□□ 0.62
ZNF541-201ENST00000263351 LRRFIP1Q32MZ4 808 aaKnown RBP18.95■□□□□ 0.62
ZNF541-201ENST00000263351 ADGRA1Q86SQ6 560 aa18.95■□□□□ 0.62
ZNF541-201ENST00000263351 NEK11Q8NG66 645 aa18.95■□□□□ 0.62
ZNF541-201ENST00000263351 UBR2Q8IWV8 1755 aa18.95■□□□□ 0.62
ZNF541-201ENST00000263351 CUTAO60888 179 aa18.95■□□□□ 0.62
ZNF541-201ENST00000263351 VPS54Q9P1Q0 977 aa18.95■□□□□ 0.62
ZNF541-201ENST00000263351 ZNF142P52746 1687 aaPredicted RBP18.95■□□□□ 0.62
ZNF541-201ENST00000263351 ZRANB2O95218 330 aaKnown RBP eCLIP18.94■□□□□ 0.62
ZNF541-201ENST00000263351 MMP1P03956 469 aa18.94■□□□□ 0.62
ZNF541-201ENST00000263351 HSPA2P54652 639 aa18.94■□□□□ 0.62
ZNF541-201ENST00000263351 GIGYF2Q6Y7W6 1299 aaKnown RBP18.94■□□□□ 0.62
ZNF541-201ENST00000263351 NOL10Q9BSC4 688 aaKnown RBP18.94■□□□□ 0.62
ZNF541-201ENST00000263351 CDC25AP30304 524 aa18.94■□□□□ 0.62
ZNF541-201ENST00000263351 PHLPP2Q6ZVD8 1323 aa18.94■□□□□ 0.62
ZNF541-201ENST00000263351 JMYQ8N9B5 988 aa18.94■□□□□ 0.62
ZNF541-201ENST00000263351 MAP3K15Q6ZN16 1313 aa18.93■□□□□ 0.62
ZNF541-201ENST00000263351 TBX2Q13207 712 aaPredicted RBP18.93■□□□□ 0.62
ZNF541-201ENST00000263351 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
ZNF541-201ENST00000263351 SPATA5Q8NB90 893 aa18.93■□□□□ 0.62
ZNF541-201ENST00000263351 STRCP1A6NGW2 1772 aa18.93■□□□□ 0.62
ZNF541-201ENST00000263351 MINDY4BA8MYZ0 360 aa18.93■□□□□ 0.62
ZNF541-201ENST00000263351 CDKL5O76039 1030 aa18.93■□□□□ 0.62
ZNF541-201ENST00000263351 FMNL1O95466 1100 aaPredicted RBP18.93■□□□□ 0.62
ZNF541-201ENST00000263351 TDO2P48775 406 aa18.93■□□□□ 0.62
ZNF541-201ENST00000263351 DPYDQ12882 1025 aa18.93■□□□□ 0.62
ZNF541-201ENST00000263351 UBE3CQ15386 1083 aa18.93■□□□□ 0.62
ZNF541-201ENST00000263351 SLC4A8Q2Y0W8 1093 aa18.93■□□□□ 0.62
ZNF541-201ENST00000263351 CPLX2Q6PUV4 134 aaKnown RBP18.93■□□□□ 0.62
ZNF541-201ENST00000263351 CREBRFQ8IUR6 639 aa18.93■□□□□ 0.62
ZNF541-201ENST00000263351 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.93■□□□□ 0.62
ZNF541-201ENST00000263351 ZNF18P17022 549 aa18.92■□□□□ 0.62
ZNF541-201ENST00000263351 BMS1Q14692 1282 aaKnown RBP18.92■□□□□ 0.62
ZNF541-201ENST00000263351 RAD9BQ6WBX8 426 aa18.92■□□□□ 0.62
ZNF541-201ENST00000263351 KIFC2Q96AC6 838 aa18.92■□□□□ 0.62
ZNF541-201ENST00000263351 PUF60Q9UHX1 559 aaKnown RBP18.92■□□□□ 0.62
ZNF541-201ENST00000263351 SLC4A4Q9Y6R1 1079 aa18.92■□□□□ 0.62
ZNF541-201ENST00000263351 ACTN4O43707 911 aaKnown RBP18.92■□□□□ 0.62
ZNF541-201ENST00000263351 NRDCO43847 1150 aa18.92■□□□□ 0.62
ZNF541-201ENST00000263351 RTN1Q16799 776 aa18.92■□□□□ 0.62
ZNF541-201ENST00000263351 FAM237AA0A1B0GTK4 181 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 CBFA2T2O43439 604 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 TBC1D8O95759 1140 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 VEGFAP15692 232 aaPredicted RBP18.91■□□□□ 0.62
ZNF541-201ENST00000263351 TMCO3Q6UWJ1 677 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 BRINP3Q76B58 766 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 SGMS1Q86VZ5 419 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 SMARCE1Q969G3 411 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 TMEM87BQ96K49 555 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 SUGCTQ9HAC7 445 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 TOGARAM1Q9Y4F4 1720 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 ARHGAP6O43182 974 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 PTPREP23469 700 aa18.91■□□□□ 0.62
ZNF541-201ENST00000263351 CASQ1P31415 396 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms