RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 IMPG2Q9BZV3 1241 aa13.47□□□□□ -0.25
SMG6-201ENST00000263073 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.47□□□□□ -0.25
SMG6-201ENST00000263073 ADAT2Q7Z6V5 191 aaKnown RBP13.47□□□□□ -0.25
SMG6-201ENST00000263073 POTEDQ86YR6 584 aa13.47□□□□□ -0.25
SMG6-201ENST00000263073 LINS1Q8NG48 757 aa13.47□□□□□ -0.25
SMG6-201ENST00000263073 NOX5Q96PH1 765 aa13.47□□□□□ -0.25
SMG6-201ENST00000263073 BUB1O43683 1085 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 GNAQP50148 359 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 FAM89AQ96GI7 184 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 MAK16Q9BXY0 300 aaKnown RBP13.46□□□□□ -0.25
SMG6-201ENST00000263073 NLRC4Q9NPP4 1024 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 SSX2IPQ9Y2D8 614 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 ADGRL1O94910 1474 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 GSPT1P15170 499 aaKnown RBP13.46□□□□□ -0.25
SMG6-201ENST00000263073 SMC1BQ8NDV3 1235 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 SERTAD1Q9UHV2 236 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 GBP1P32455 592 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 AKAP4Q5JQC9 854 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 MYO1AQ9UBC5 1043 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 SEPT6Q14141 434 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 TNNI3KQ59H18 835 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 CFAP57Q96MR6 1250 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 FPGT-TNNI3KV9GXZ4 949 aa13.46□□□□□ -0.25
SMG6-201ENST00000263073 POLR3AO14802 1390 aaPredicted RBP13.46□□□□□ -0.26
SMG6-201ENST00000263073 DDX39AO00148 427 aaKnown RBP13.46□□□□□ -0.26
SMG6-201ENST00000263073 SGSM2O43147 1006 aa13.46□□□□□ -0.26
SMG6-201ENST00000263073 LMNTD2Q8IXW0 634 aa13.46□□□□□ -0.26
SMG6-201ENST00000263073 TBC1D31Q96DN5 1066 aa13.46□□□□□ -0.26
SMG6-201ENST00000263073 IFT74Q96LB3 600 aa13.46□□□□□ -0.26
SMG6-201ENST00000263073 ASIC3Q9UHC3 531 aa13.46□□□□□ -0.26
SMG6-201ENST00000263073 MAP2K2P36507 400 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 PEX19P40855 299 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 TUBB4BP68371 445 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 PPP2R5CQ13362 524 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 CCDC170Q8IYT3 715 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 MCUR1Q96AQ8 359 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 EEF2KMTQ96G04 330 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 ARHGAP6O43182 974 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 EPB41P11171 864 aaKnown RBP13.45□□□□□ -0.26
SMG6-201ENST00000263073 BIRC3Q13489 604 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 GEN1Q17RS7 908 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 INF2Q27J81 1249 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 DDX41Q9UJV9 622 aaKnown RBP13.45□□□□□ -0.26
SMG6-201ENST00000263073 CAPN12Q6ZSI9 719 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 FCHSD1Q86WN1 690 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 USP37Q86T82 979 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 ZCRB1Q8TBF4 217 aaKnown RBP13.45□□□□□ -0.26
SMG6-201ENST00000263073 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 EYA1Q99502 592 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 HELLSQ9NRZ9 838 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 IMPACTQ9P2X3 320 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 SWAP70Q9UH65 585 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 FRMD4BQ9Y2L6 1034 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 ATP2A2P16615 1042 aaKnown RBP13.45□□□□□ -0.26
SMG6-201ENST00000263073 MAGEA1P43355 309 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 SESN3P58005 492 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 FYB2Q5VWT5 728 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
SMG6-201ENST00000263073 VEZTQ9HBM0 779 aa13.45□□□□□ -0.26
SMG6-201ENST00000263073 ZMYND10O75800 440 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 PARP1P09874 1014 aaKnown RBP13.44□□□□□ -0.26
SMG6-201ENST00000263073 RRAGAQ7L523 313 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 KIAA1524Q8TCG1 905 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 TESK2Q96S53 571 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 PDE11AQ9HCR9 933 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 WDR66Q8TBY9 1149 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 THOC2Q8NI27 1593 aaKnown RBP13.44□□□□□ -0.26
SMG6-201ENST00000263073 PRAG1Q86YV5 1406 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 ALDH3A1P30838 453 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 PTH1RQ03431 593 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 TTC38Q5R3I4 469 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 RBM26Q5T8P6 1007 aaKnown RBP13.44□□□□□ -0.26
SMG6-201ENST00000263073 KCTD16Q68DU8 428 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 KRT40Q6A162 431 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 VPS54Q9P1Q0 977 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 TAF5LO75529 589 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 KRT71Q3SY84 523 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 CACNA2D3Q8IZS8 1091 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 MICAL1Q8TDZ2 1067 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 TEX13AQ9BXU3 409 aaPredicted RBP13.44□□□□□ -0.26
SMG6-201ENST00000263073 RIPOR2Q9Y4F9 1068 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 BRD1O95696 1058 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 DIXDC1Q155Q3 683 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 RILPL1Q5EBL4 403 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 LRRC8AQ8IWT6 810 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 SETDB2Q96T68 719 aa13.44□□□□□ -0.26
SMG6-201ENST00000263073 GPAA1O43292 621 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 DEXIO95424 95 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 C2CD5Q86YS7 1000 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 CTTNBP2NLQ9P2B4 639 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 CCDC169A6NNP5 214 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 FNBP4Q8N3X1 1017 aaPredicted RBP13.43□□□□□ -0.26
SMG6-201ENST00000263073 TAB3Q8N5C8 712 aaPredicted RBP13.43□□□□□ -0.26
SMG6-201ENST00000263073 TRIM35Q9UPQ4 493 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 CUTAO60888 179 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 RPSAP08865 295 aaKnown RBP13.43□□□□□ -0.26
SMG6-201ENST00000263073 GNA11P29992 359 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 NCAPH2Q6IBW4 605 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 ZNF365Q70YC5 407 aa13.43□□□□□ -0.26
SMG6-201ENST00000263073 CCDC105Q8IYK2 499 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms