RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 GNAI3P08754 354 aa16.3■□□□□ 0.2
SGCA-201ENST00000262018 SCYL3Q8IZE3 742 aa16.3■□□□□ 0.2
SGCA-201ENST00000262018 PUS3Q9BZE2 481 aaKnown RBP16.3■□□□□ 0.2
SGCA-201ENST00000262018 C9orf78Q9NZ63 289 aaPredicted RBP16.3■□□□□ 0.2
SGCA-201ENST00000262018 PTPRAP18433 802 aa16.29■□□□□ 0.2
SGCA-201ENST00000262018 RGS3P49796 1198 aa16.29■□□□□ 0.2
SGCA-201ENST00000262018 NFIAQ12857 509 aa16.29■□□□□ 0.2
SGCA-201ENST00000262018 LRRC26Q2I0M4 334 aa16.29■□□□□ 0.2
SGCA-201ENST00000262018 CAVIN4Q5BKX8 364 aa16.29■□□□□ 0.2
SGCA-201ENST00000262018 CEP85Q6P2H3 762 aa16.29■□□□□ 0.2
SGCA-201ENST00000262018 RBM19Q9Y4C8 960 aaKnown RBP16.29■□□□□ 0.2
SGCA-201ENST00000262018 AFG3L2Q9Y4W6 797 aa16.29■□□□□ 0.2
SGCA-201ENST00000262018 COL2A1P02458 1487 aaPredicted RBP16.29■□□□□ 0.2
SGCA-201ENST00000262018 GNAI2P04899 355 aa16.28■□□□□ 0.2
SGCA-201ENST00000262018 FAM110CQ1W6H9 321 aa16.28■□□□□ 0.2
SGCA-201ENST00000262018 MYLIPQ8WY64 445 aa16.28■□□□□ 0.2
SGCA-201ENST00000262018 LBHD1Q9BQE6 289 aaPredicted RBP16.28■□□□□ 0.2
SGCA-201ENST00000262018 SUGT1Q9Y2Z0 365 aa16.28■□□□□ 0.2
SGCA-201ENST00000262018 SPTBN5Q9NRC6 3674 aaKnown RBP16.28■□□□□ 0.2
SGCA-201ENST00000262018 UTYO14607 1347 aa16.28■□□□□ 0.2
SGCA-201ENST00000262018 TRIM75PA6NK02 468 aa16.28■□□□□ 0.2
SGCA-201ENST00000262018 NUCB1Q02818 461 aa16.28■□□□□ 0.2
SGCA-201ENST00000262018 CDC42EP5Q6NZY7 148 aa16.28■□□□□ 0.2
SGCA-201ENST00000262018 USP44Q9H0E7 712 aa16.28■□□□□ 0.2
SGCA-201ENST00000262018 SEMA6BQ9H3T3 888 aa16.28■□□□□ 0.2
SGCA-201ENST00000262018 GJD2Q9UKL4 321 aa16.28■□□□□ 0.2
SGCA-201ENST00000262018 AGTPBP1Q9UPW5 1226 aa16.28■□□□□ 0.2
SGCA-201ENST00000262018 PHF20L1A8MW92 1017 aa16.27■□□□□ 0.19
SGCA-201ENST00000262018 COL6A1P12109 1028 aa16.27■□□□□ 0.19
SGCA-201ENST00000262018 TRIB2Q92519 343 aa16.27■□□□□ 0.19
SGCA-201ENST00000262018 FAM198AQ9UFP1 575 aa16.27■□□□□ 0.19
SGCA-201ENST00000262018 PNMA3Q9UL41 463 aa16.27■□□□□ 0.19
SGCA-201ENST00000262018 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
SGCA-201ENST00000262018 PDE4AP27815 886 aa16.26■□□□□ 0.19
SGCA-201ENST00000262018 TREML2Q5T2D2 321 aa16.26■□□□□ 0.19
SGCA-201ENST00000262018 ZFPM1Q8IX07 1006 aa16.26■□□□□ 0.19
SGCA-201ENST00000262018 BACH2Q9BYV9 841 aa16.26■□□□□ 0.19
SGCA-201ENST00000262018 DCTPP1Q9H773 170 aa16.26■□□□□ 0.19
SGCA-201ENST00000262018 DAGLAQ9Y4D2 1042 aa16.26■□□□□ 0.19
SGCA-201ENST00000262018 MROH5Q6ZUA9 1318 aa16.26■□□□□ 0.19
SGCA-201ENST00000262018 TNFRSF10AO00220 468 aa16.25■□□□□ 0.19
SGCA-201ENST00000262018 NBPF7P0C2Y1 421 aaPredicted RBP16.25■□□□□ 0.19
SGCA-201ENST00000262018 CYP2B6P20813 491 aa16.25■□□□□ 0.19
SGCA-201ENST00000262018 CCDC84Q86UT8 332 aaPredicted RBP16.25■□□□□ 0.19
SGCA-201ENST00000262018 USP40Q9NVE5 1235 aa16.25■□□□□ 0.19
SGCA-201ENST00000262018 LRRFIP2Q9Y608 721 aaKnown RBP16.25■□□□□ 0.19
SGCA-201ENST00000262018 HMMRO75330 724 aa16.24■□□□□ 0.19
SGCA-201ENST00000262018 UBTFL1P0CB47 393 aaPredicted RBP16.24■□□□□ 0.19
SGCA-201ENST00000262018 FOSL2P15408 326 aa16.24■□□□□ 0.19
SGCA-201ENST00000262018 DIXDC1Q155Q3 683 aa16.24■□□□□ 0.19
SGCA-201ENST00000262018 MAP3K21Q5TCX8 1036 aa16.24■□□□□ 0.19
SGCA-201ENST00000262018 CHD1LQ86WJ1 897 aa16.24■□□□□ 0.19
SGCA-201ENST00000262018 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.24■□□□□ 0.19
SGCA-201ENST00000262018 HDAC5Q9UQL6 1122 aa16.24■□□□□ 0.19
SGCA-201ENST00000262018 PLA2G5P39877 138 aa16.23■□□□□ 0.19
SGCA-201ENST00000262018 GCLCP48506 637 aaPredicted RBP16.23■□□□□ 0.19
SGCA-201ENST00000262018 METTL24Q5JXM2 366 aa16.23■□□□□ 0.19
SGCA-201ENST00000262018 FAM122AQ96E09 287 aa16.23■□□□□ 0.19
SGCA-201ENST00000262018 ATRNL1Q5VV63 1379 aa16.23■□□□□ 0.19
SGCA-201ENST00000262018 ATP8B2P98198 1209 aa16.22■□□□□ 0.19
SGCA-201ENST00000262018 TJAP1Q5JTD0 557 aa16.22■□□□□ 0.19
SGCA-201ENST00000262018 ZSCAN29Q8IWY8 852 aaPredicted RBP16.22■□□□□ 0.19
SGCA-201ENST00000262018 PTPRFP10586 1907 aa16.21■□□□□ 0.19
SGCA-201ENST00000262018 SLURP2P0DP57 97 aa16.21■□□□□ 0.19
SGCA-201ENST00000262018 SHHQ15465 462 aa16.21■□□□□ 0.19
SGCA-201ENST00000262018 LRRC24Q50LG9 513 aa16.21■□□□□ 0.19
SGCA-201ENST00000262018 ANKRD45Q5TZF3 282 aa16.21■□□□□ 0.19
SGCA-201ENST00000262018 WDR66Q8TBY9 1149 aa16.21■□□□□ 0.19
SGCA-201ENST00000262018 SUCLG2Q96I99 432 aa16.21■□□□□ 0.19
SGCA-201ENST00000262018 TTYH1Q9H313 450 aaPredicted RBP16.21■□□□□ 0.19
SGCA-201ENST00000262018 EYSQ5T1H1 3165 aa16.21■□□□□ 0.19
SGCA-201ENST00000262018 TMEM265A0A087WTH1 108 aa16.2■□□□□ 0.18
SGCA-201ENST00000262018 CTNND1O60716 968 aaKnown RBP16.2■□□□□ 0.18
SGCA-201ENST00000262018 CACNB2Q08289 660 aaPredicted RBP16.2■□□□□ 0.18
SGCA-201ENST00000262018 PROCA1Q8NCQ7 364 aaPredicted RBP16.2■□□□□ 0.18
SGCA-201ENST00000262018 SENP6Q9GZR1 1112 aaPredicted RBP16.2■□□□□ 0.18
SGCA-201ENST00000262018 PRKAG2Q9UGJ0 569 aa16.2■□□□□ 0.18
SGCA-201ENST00000262018 PRUNE2Q8WUY3 3088 aa16.2■□□□□ 0.18
SGCA-201ENST00000262018 PDE8BO95263 885 aa16.19■□□□□ 0.18
SGCA-201ENST00000262018 CCND3P30281 292 aaPredicted RBP16.19■□□□□ 0.18
SGCA-201ENST00000262018 C8orf34Q49A92 452 aa16.19■□□□□ 0.18
SGCA-201ENST00000262018 LHX8Q68G74 356 aa16.19■□□□□ 0.18
SGCA-201ENST00000262018 KAZALD1Q96I82 304 aa16.19■□□□□ 0.18
SGCA-201ENST00000262018 NUDT12Q9BQG2 462 aa16.19■□□□□ 0.18
SGCA-201ENST00000262018 LNPKQ9C0E8 428 aa16.19■□□□□ 0.18
SGCA-201ENST00000262018 LAMA2P24043 3122 aaKnown RBP16.19■□□□□ 0.18
SGCA-201ENST00000262018 ZKSCAN1P17029 563 aaPredicted RBP16.19■□□□□ 0.18
SGCA-201ENST00000262018 PRDX5P30044 214 aa16.19■□□□□ 0.18
SGCA-201ENST00000262018 ATN1P54259 1190 aaPredicted RBP16.19■□□□□ 0.18
SGCA-201ENST00000262018 PABPC4Q13310 644 aaKnown RBP eCLIP16.19■□□□□ 0.18
SGCA-201ENST00000262018 RABL6Q3YEC7 729 aaPredicted RBP16.19■□□□□ 0.18
SGCA-201ENST00000262018 C9orf50Q5SZB4 431 aa16.19■□□□□ 0.18
SGCA-201ENST00000262018 SH3BP5LQ7L8J4 393 aa16.19■□□□□ 0.18
SGCA-201ENST00000262018 VGLL2Q8N8G2 317 aa16.19■□□□□ 0.18
SGCA-201ENST00000262018 ASCC2Q9H1I8 757 aaPredicted RBP16.19■□□□□ 0.18
SGCA-201ENST00000262018 BICC1Q9H694 974 aaKnown RBP16.19■□□□□ 0.18
SGCA-201ENST00000262018 DOCK2Q92608 1830 aa16.18■□□□□ 0.18
SGCA-201ENST00000262018 PLXNB2O15031 1838 aa16.18■□□□□ 0.18
SGCA-201ENST00000262018 PHIPQ8WWQ0 1821 aa16.18■□□□□ 0.18
SGCA-201ENST00000262018 PNMA6EA0A0J9YXQ4 647 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms