RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 RNF186Q9NXI6 227 aa17.2■□□□□ 0.34
CNN1-201ENST00000252456 SAP30BPQ9UHR5 308 aaKnown RBP17.2■□□□□ 0.34
CNN1-201ENST00000252456 TSKSQ9UJT2 592 aa17.2■□□□□ 0.34
CNN1-201ENST00000252456 CTCFP49711 727 aaPredicted RBP17.19■□□□□ 0.34
CNN1-201ENST00000252456 RRP1BQ14684 758 aaKnown RBP17.19■□□□□ 0.34
CNN1-201ENST00000252456 ZSCAN25Q6NSZ9 544 aa17.19■□□□□ 0.34
CNN1-201ENST00000252456 SDR42E1Q8WUS8 393 aa17.19■□□□□ 0.34
CNN1-201ENST00000252456 BEGAINQ9BUH8 593 aa17.19■□□□□ 0.34
CNN1-201ENST00000252456 PI4KBQ9UBF8 816 aa17.19■□□□□ 0.34
CNN1-201ENST00000252456 MANSC4A6NHS7 340 aaPredicted RBP17.18■□□□□ 0.34
CNN1-201ENST00000252456 CA12O43570 354 aa17.18■□□□□ 0.34
CNN1-201ENST00000252456 USP5P45974 858 aa17.18■□□□□ 0.34
CNN1-201ENST00000252456 SLC4A8Q2Y0W8 1093 aa17.18■□□□□ 0.34
CNN1-201ENST00000252456 PLEKHM2Q8IWE5 1019 aa17.18■□□□□ 0.34
CNN1-201ENST00000252456 CRNKL1Q9BZJ0 848 aaKnown RBP17.18■□□□□ 0.34
CNN1-201ENST00000252456 SAGE1Q9NXZ1 904 aa17.18■□□□□ 0.34
CNN1-201ENST00000252456 HERC5Q9UII4 1024 aaKnown RBP17.18■□□□□ 0.34
CNN1-201ENST00000252456 TESPA1A2RU30 521 aaPredicted RBP17.18■□□□□ 0.34
CNN1-201ENST00000252456 IGF2BP3O00425 579 aaKnown RBP eCLIP17.18■□□□□ 0.34
CNN1-201ENST00000252456 IRF6O14896 467 aa17.18■□□□□ 0.34
CNN1-201ENST00000252456 RNF113AO15541 343 aaKnown RBP17.18■□□□□ 0.34
CNN1-201ENST00000252456 PRKAB2O43741 272 aa17.18■□□□□ 0.34
CNN1-201ENST00000252456 LBX1P52954 281 aa17.18■□□□□ 0.34
CNN1-201ENST00000252456 SREBF2Q12772 1141 aa17.18■□□□□ 0.34
CNN1-201ENST00000252456 PPIL2Q13356 520 aa17.18■□□□□ 0.34
CNN1-201ENST00000252456 SCYL3Q8IZE3 742 aa17.18■□□□□ 0.34
CNN1-201ENST00000252456 OSBP2Q969R2 916 aa17.18■□□□□ 0.34
CNN1-201ENST00000252456 PTPN18Q99952 460 aa17.18■□□□□ 0.34
CNN1-201ENST00000252456 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.18■□□□□ 0.34
CNN1-201ENST00000252456 DCP1AQ9NPI6 582 aaPredicted RBP17.18■□□□□ 0.34
CNN1-201ENST00000252456 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.18■□□□□ 0.34
CNN1-201ENST00000252456 CTNND1O60716 968 aaKnown RBP17.17■□□□□ 0.34
CNN1-201ENST00000252456 TRPA1O75762 1119 aa17.17■□□□□ 0.34
CNN1-201ENST00000252456 EVX2Q03828 476 aa17.17■□□□□ 0.34
CNN1-201ENST00000252456 PPATQ06203 517 aa17.17■□□□□ 0.34
CNN1-201ENST00000252456 APPBP2Q92624 585 aa17.17■□□□□ 0.34
CNN1-201ENST00000252456 OSBPL3Q9H4L5 887 aa17.17■□□□□ 0.34
CNN1-201ENST00000252456 CASP8AP2Q9UKL3 1982 aa17.16■□□□□ 0.34
CNN1-201ENST00000252456 ZFYP08048 801 aaPredicted RBP17.16■□□□□ 0.34
CNN1-201ENST00000252456 PDE4AP27815 886 aa17.16■□□□□ 0.34
CNN1-201ENST00000252456 INHBEP58166 350 aa17.16■□□□□ 0.34
CNN1-201ENST00000252456 IFNL1Q8IU54 200 aa17.16■□□□□ 0.34
CNN1-201ENST00000252456 BRI3BPQ8WY22 251 aa17.16■□□□□ 0.34
CNN1-201ENST00000252456 PTPRAP18433 802 aa17.15■□□□□ 0.34
CNN1-201ENST00000252456 PLCD1P51178 756 aa17.15■□□□□ 0.34
CNN1-201ENST00000252456 JAG1P78504 1218 aa17.15■□□□□ 0.34
CNN1-201ENST00000252456 FOXP4Q8IVH2 680 aaPredicted RBP17.15■□□□□ 0.34
CNN1-201ENST00000252456 FSD1Q9BTV5 496 aa17.15■□□□□ 0.34
CNN1-201ENST00000252456 EHD4Q9H223 541 aa17.15■□□□□ 0.34
CNN1-201ENST00000252456 PRDM10Q9NQV6 1147 aa17.15■□□□□ 0.34
CNN1-201ENST00000252456 KCNH4Q9UQ05 1017 aa17.15■□□□□ 0.34
CNN1-201ENST00000252456 M0R2C6 588 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 HLA-DOAP06340 250 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 CAP2P40123 477 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 GTF2A2P52657 109 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
CNN1-201ENST00000252456 COL13A1Q5TAT6 717 aaPredicted RBP17.14■□□□□ 0.33
CNN1-201ENST00000252456 CCDC84Q86UT8 332 aaPredicted RBP17.14■□□□□ 0.33
CNN1-201ENST00000252456 STRBPQ96SI9 672 aaKnown RBP17.14■□□□□ 0.33
CNN1-201ENST00000252456 SEC62Q99442 399 aaKnown RBP17.14■□□□□ 0.33
CNN1-201ENST00000252456 CCL15-CCL14A0A0B4J2E2 113 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 GABPAQ06546 454 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 MOGSQ13724 837 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 CCL15Q16663 113 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 ZMYM1Q5SVZ6 1142 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 EVI5LQ96CN4 794 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 CFHR5Q9BXR6 569 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 R3HDMLQ9H3Y0 253 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 ATP8A2Q9NTI2 1148 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 MCM9Q9NXL9 1143 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 SERPINB13Q9UIV8 391 aa17.14■□□□□ 0.33
CNN1-201ENST00000252456 MYH8P13535 1937 aa17.13■□□□□ 0.33
CNN1-201ENST00000252456 SMIM22K7EJ46 135 aa17.13■□□□□ 0.33
CNN1-201ENST00000252456 CYP2D6P10635 497 aa17.13■□□□□ 0.33
CNN1-201ENST00000252456 TTC6Q86TZ1 520 aa17.13■□□□□ 0.33
CNN1-201ENST00000252456 CRACR2BQ8N4Y2 399 aaPredicted RBP17.13■□□□□ 0.33
CNN1-201ENST00000252456 PICK1Q9NRD5 415 aa17.13■□□□□ 0.33
CNN1-201ENST00000252456 SLC4A4Q9Y6R1 1079 aa17.13■□□□□ 0.33
CNN1-201ENST00000252456 ZHX2Q9Y6X8 837 aa17.13■□□□□ 0.33
CNN1-201ENST00000252456 GPAA1O43292 621 aa17.12■□□□□ 0.33
CNN1-201ENST00000252456 SNAPC2Q13487 334 aa17.12■□□□□ 0.33
CNN1-201ENST00000252456 TATDN1Q6P1N9 297 aa17.12■□□□□ 0.33
CNN1-201ENST00000252456 AFG3L2Q9Y4W6 797 aa17.12■□□□□ 0.33
CNN1-201ENST00000252456 LOC285556D6RIA3 1793 aa17.12■□□□□ 0.33
CNN1-201ENST00000252456 GSG1L2A8MUP6 293 aa17.11■□□□□ 0.33
CNN1-201ENST00000252456 TBC1D8O95759 1140 aa17.11■□□□□ 0.33
CNN1-201ENST00000252456 SHMT1P34896 483 aa17.11■□□□□ 0.33
CNN1-201ENST00000252456 LRRFIP1Q32MZ4 808 aaKnown RBP17.11■□□□□ 0.33
CNN1-201ENST00000252456 FAM43AQ8N2R8 423 aa17.11■□□□□ 0.33
CNN1-201ENST00000252456 EPB41L4AQ9HCS5 686 aaPredicted RBP17.11■□□□□ 0.33
CNN1-201ENST00000252456 CYP2D7A0A087X1C5 515 aa17.1■□□□□ 0.33
CNN1-201ENST00000252456 GDF11O95390 407 aa17.1■□□□□ 0.33
CNN1-201ENST00000252456 ALDH1A1P00352 501 aa17.1■□□□□ 0.33
CNN1-201ENST00000252456 POLR3DP05423 398 aaPredicted RBP17.1■□□□□ 0.33
CNN1-201ENST00000252456 CETPP11597 493 aa17.1■□□□□ 0.33
CNN1-201ENST00000252456 USP17L12C9JPN9 530 aa17.1■□□□□ 0.33
CNN1-201ENST00000252456 USP17L21D6R901 530 aa17.1■□□□□ 0.33
CNN1-201ENST00000252456 CXCL11O14625 94 aa17.1■□□□□ 0.33
CNN1-201ENST00000252456 FOXP2O15409 715 aa17.1■□□□□ 0.33
CNN1-201ENST00000252456 C12orf60Q5U649 245 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms